CX672058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP1M1_YEAST (AP-1 complex subunit mu-1-I OS=Saccharomyces cerevisiae GN=APM1 PE=1 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 9.120e-46 Identity = 95/172 (55.23%), Postives = 119/172 (69.19%), Query Frame = -3 Query: 403 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEE---------AAPERKAPIRVKFEIPYFTVSGIQVRYLKIIE-KSGYQALPWVRYITMAG-EYELRL 885 LM YRLST +KPLIW + ++ HS SRIEI KA++Q K +STATNVEI +PVP DA P + S GS +Y PE A++WKI+SFPG KEY + AE LPSI+ E A K P+++KF+IPYFT SGIQVRYLKI E K Y++ PWVRYIT +G +Y +RL Sbjct: 303 LMNYRLSTTIKPLIWCDVNVQVHSNSRIEIHCKAKAQIKRKSTATNVEILIPVPDDADTPTFKYSHGSLKYVPEKSAILWKIRSFPGGKEYSMSAELGLPSISNNEDGNRTMPKSNAEILKGPVQIKFQIPYFTTSGIQVRYLKINEPKLQYKSYPWVRYITQSGDDYTIRL 474
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP2M_DICDI (AP-2 complex subunit mu OS=Dictyostelium discoideum GN=apm2 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27 Identity = 57/161 (35.40%), Postives = 91/161 (56.52%), Query Frame = -3 Query: 403 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL 885 LM YR + + V + R+R+E V +S F + NV++ +P P + + + G A+Y PE DA++W+I+ FPG+ E+ LRAE L + + + PI ++F++ FT SG VR+LK++EKS Y + WVRY+T AG Y+ R+ Sbjct: 279 LMRYRTTEHINLPFKVIPIVREMGRTRLECSVTVKSNFSSKMFGANVKVIIPTPKNTAVCKIVVAAGKAKYMPEQDAIIWRIRRFPGDTEFTLRAEVELMASVNLDKKAWSRPPISMEFQVTMFTASGFSVRFLKVVEKSNYTPIKWVRYLTKAGTYQNRI 439
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP2M_CAEEL (AP-2 complex subunit mu OS=Caenorhabditis elegans GN=dpy-23 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 5.039e-20 Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 885 LM YR + ++ V + SR+++E+ V +S FK A +E+ +P P + + + G A+Y +A+VWKIK G KE + AE L S E + P+ + FE+P F SG++VRYLK+ E S + + WVRYI +G YE R Sbjct: 278 LMRYRTTKDIQLPFRVIPLVREVSRNKMEVKVVVKSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAEIDLLSTGNVEKKKWNRPPVSMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 440
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP2MA_DANRE (AP-2 complex subunit mu-1-A OS=Danio rerio GN=ap2m1a PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.572e-19 Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 885 LM YR + + V + R+++E+ V +S FK A +E+ +P P + + V G A+Y +A+VWKIK G KE + AE L + + + PI + FE+P F SG++VRYLK+ E S + + WVRYI +G YE R Sbjct: 275 LMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIEL--LPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFESKLNYSDHDVIKWVRYIGRSGIYETR 435
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP2M1_XENTR (AP-2 complex subunit mu-1 OS=Xenopus tropicalis GN=ap2m1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 885 LM YR + + V + R+++E+ V +S FK A +E+ +P P + + V G A+Y +A+VWKIK G KE + AE L + + + PI + FE+P F SG++VRYLK+ E S + + WVRYI +G YE R Sbjct: 274 LMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIEL--LPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETR 434
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP2M1_XENLA (AP-2 complex subunit mu-1 OS=Xenopus laevis GN=ap2m1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 885 LM YR + + V + R+++E+ V +S FK A +E+ +P P + + V G A+Y +A+VWKIK G KE + AE L + + + PI + FE+P F SG++VRYLK+ E S + + WVRYI +G YE R Sbjct: 274 LMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIEL--LPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETR 434
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP2M1_RAT (AP-2 complex subunit mu OS=Rattus norvegicus GN=Ap2m1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 885 LM YR + + V + R+++E+ V +S FK A +E+ +P P + + V G A+Y +A+VWKIK G KE + AE L + + + PI + FE+P F SG++VRYLK+ E S + + WVRYI +G YE R Sbjct: 274 LMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIEL--LPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETR 434
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP2M1_PONAB (AP-2 complex subunit mu OS=Pongo abelii GN=AP2M1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 885 LM YR + + V + R+++E+ V +S FK A +E+ +P P + + V G A+Y +A+VWKIK G KE + AE L + + + PI + FE+P F SG++VRYLK+ E S + + WVRYI +G YE R Sbjct: 274 LMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIEL--LPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETR 434
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP2M1_MOUSE (AP-2 complex subunit mu OS=Mus musculus GN=Ap2m1 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 885 LM YR + + V + R+++E+ V +S FK A +E+ +P P + + V G A+Y +A+VWKIK G KE + AE L + + + PI + FE+P F SG++VRYLK+ E S + + WVRYI +G YE R Sbjct: 274 LMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIEL--LPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETR 434
BLAST of CX672058 vs. ExPASy Swiss-Prot
Match: AP2M1_MACFA (AP-2 complex subunit mu-1 OS=Macaca fascicularis GN=AP2M1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = -3 Query: 406 LMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPADATNPNVRTSMGSARYAPENDALVWKIKSFPGNKEYMLRAEFSLPSITAEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEK----SGYQALPWVRYITMAGEYELR 885 LM YR + + V + R+++E+ V +S FK A +E+ +P P + + V G A+Y +A+VWKIK G KE + AE L + + + PI + FE+P F SG++VRYLK+ E S + + WVRYI +G YE R Sbjct: 274 LMRYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIEL--LPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETR 434 The following BLAST results are available for this feature:
BLAST of CX672058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX672058 ID=CX672058; Name=CX672058; organism=Citrus sinensis; type=EST; length=887bpback to top |