EY664618

Overview
NameEY664618
Unique NameEY664618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length830
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.863e-24
Identity = 57/172 (33.14%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   73 LRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKS 588
            L  +F  +EM + ++GL  AGKT+++  +  G  S   IPTVGFN+  VT  NV   +WD+GGQ + R +W  Y      +++VVD AD D +  +R ELH ++N   +    +L+  NK D P A+    + +++GL  I DR          +   +   + WL  + KS
Sbjct:    5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLG-QSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175          
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.863e-24
Identity = 57/172 (33.14%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   73 LRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKS 588
            L  +F  +EM + ++GL  AGKT+++  +  G  S   IPTVGFN+  VT  NV   +WD+GGQ + R +W  Y      +++VVD AD D +  +R ELH ++N   +    +L+  NK D P A+    + +++GL  I DR          +   +   + WL  + KS
Sbjct:    5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLG-QSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175          
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.863e-24
Identity = 57/172 (33.14%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   73 LRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKS 588
            L  +F  +EM + ++GL  AGKT+++  +  G  S   IPTVGFN+  VT  NV   +WD+GGQ + R +W  Y      +++VVD AD D +  +R ELH ++N   +    +L+  NK D P A+    + +++GL  I DR          +   +   + WL  + KS
Sbjct:    5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLG-QSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175          
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.863e-24
Identity = 57/172 (33.14%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   73 LRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKS 588
            L  +F  +EM + ++GL  AGKT+++  +  G  S   IPTVGFN+  VT  NV   +WD+GGQ + R +W  Y      +++VVD AD D +  +R ELH ++N   +    +L+  NK D P A+    + +++GL  I DR          +   +   + WL  + KS
Sbjct:    5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLG-QSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175          
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.863e-24
Identity = 57/172 (33.14%), Postives = 97/172 (56.40%), Query Frame = 1
Query:   76 RSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSK 591
            +SLF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    I++VVD+ D + +S +  EL  +LN+  L    LLV  NK D P A++   +TD++GL S+  R+         +   +   ++WL  + K++
Sbjct:   10 QSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRHRQWYIQATCATSGDGLYEGLEWLSTNLKNQ 180          
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 8.863e-24
Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 1
Query:   43 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKSKS 594
            MGL  +F      LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V    ++  +WD+GGQ + R +W  Y +    +++VVD+ D D +  +R ELH +LN+  L    LLV  NK D P A++   +TD+ GL S+  R          +   +   +DWL  +  +K+
Sbjct:    1 MGL--SFTKLFSRLFAKKEMRILMVGLDAAGKTTILYQLKLGEIVTT-IPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181          
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.158e-23
Identity = 57/172 (33.14%), Postives = 89/172 (51.74%), Query Frame = 1
Query:   73 LRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKS 588
            L  +F  +EM + ++GL  AGKT+++  +  G  S   IPTVGFN+  VT  NV   +WD+GGQ + R +W  Y      +++VVD AD D +  +R ELH ++N   +    +L+  NK D P A+    + +++GL  I DR              +   + WL  + KS
Sbjct:    5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLG-QSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWLTSNYKS 175          
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.158e-23
Identity = 56/171 (32.75%), Postives = 90/171 (52.63%), Query Frame = 1
Query:   73 LRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSK 585
            L  +F  +EM + ++GL  AGKT+++  +  G  S   IPTVGFN+  VT  NV   +WD+GGQ + R +W  Y      +++VVD AD D +  +R+ELH ++N   +    +L+  NK D P A+    + +++GL  I DR          +   +   + WL  + K
Sbjct:    5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLG-QSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSNHK 174          
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4)

HSP 1 Score: 110.153 bits (274), Expect = 1.512e-23
Identity = 55/142 (38.73%), Postives = 87/142 (61.27%), Query Frame = 1
Query:   79 SLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDR 504
            SL  ++EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    I++VVD+ D D ++ +R EL  +LN+  L    LLVL NK D P A++   +T++MGL SI +R
Sbjct:   11 SLLGRREMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEAREELQSMLNEDELKDAVLLVLANKQDLPNAMNAAEITEKMGLHSIMNR 151          
BLAST of EY664618 vs. ExPASy Swiss-Prot
Match: ARF1_LOCMI (ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.512e-23
Identity = 56/176 (31.82%), Postives = 95/176 (53.98%), Query Frame = 1
Query:   61 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSISRSELHDLLNKPSLSGIPLLVLGNKIDKPGALSKQALTDEMGLKSITDREVCCFMISCKNSTNIDSVIDWLVKHSKS 588
            F N  + LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R EL  +L +  L    LL+  NK D P A++   +TD++GL S+ +R          +   +   +DWL    K+
Sbjct:    5 FANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 179          
The following BLAST results are available for this feature:
BLAST of EY664618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
ARF6_RAT8.863e-2433.14ADP-ribosylation factor 6 OS=Rattus norvegicus GN=... [more]
ARF6_PIG8.863e-2433.14ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE... [more]
ARF6_MOUSE8.863e-2433.14ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 ... [more]
ARF6_HUMAN8.863e-2433.14ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 ... [more]
ARF1_SCHPO8.863e-2433.14ADP-ribosylation factor 1 OS=Schizosaccharomyces p... [more]
ARF1_CATRO8.863e-2433.15ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]
ARF6_CHICK1.158e-2333.14ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6... [more]
ARF3_DROME1.158e-2332.75ADP-ribosylation factor 3 OS=Drosophila melanogast... [more]
ARF_CANAL1.512e-2338.73ADP-ribosylation factor OS=Candida albicans GN=ARF... [more]
ARF1_LOCMI1.512e-2331.82ADP-ribosylation factor 1 OS=Locusta migratoria GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-E09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664618 ID=EY664618; Name=EY664618; organism=Citrus sinensis; type=EST; length=830bp
CCACGCGTCCGGTGATCATCGTCATCACCATCATCATTATCAATGGGATT
GTGGGAAGCTTTTCTGAATTGGCTCCGCAGCCTCTTTTTTAAACAGGAAA
TGGAGCTGTCCCTGATTGGACTTCAGAATGCTGGAAAGACCTCACTTGTA
AATGTTGTTGCTACTGGTGGATATAGCGAGGACATGATCCCTACGGTCGG
ATTCAACATGAGGAAAGTGACAAAAGGAAATGTTACAATTAAGCTTTGGG
ATCTTGGAGGTCAACCTAGATTCCGCAGTATGTGGGAGCGGTATTGCCGG
GCAGTTTCTGCTATTGTTTACGTGGTGGATGCTGCTGATCCTGACAACCT
GAGCATTTCAAGAAGTGAACTTCATGATTTGCTGAACAAACCCTCACTTA
GTGGTATCCCTTTGCTGGTGCTAGGGAACAAGATTGACAAACCCGGAGCT
CTATCTAAACAGGCTTTAACTGATGAAATGGGACTAAAATCCATCACCGA
CAGAGAAGTTTGCTGCTTTATGATCTCATGCAAGAACTCGACCAACATTG
ACTCCGTAATTGATTGGCTTGTCAAACATTCAAAGTCAAAGAGCTGAGAG
GACTTATTTTTACTTATCCCTTTTCTTCTTTCTTTGNGGATGTCTGTGAT
ATAATTTCAGAAGGATGCATTTCTGGGGGTGTTAATGGAAGTTTTCATCA
TTCAAACTTGTTTTGCTGTTTGTAAATGATTTTTTTCCCTTCTGAGTTCT
GAGTTGCATGTAGTGTATTATATTAGATAATTTATCCTAATTATTGGCTT
TGGGGGGTTTGTAAAAAAAAAAAANNNNNN
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