CX672040

Overview
NameCX672040
Unique NameCX672040
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672040 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.892e-12
Identity = 48/156 (30.77%), Postives = 85/156 (54.49%), Query Frame = 3
Query:  408 QFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFDENGDPRLSCFGL---MKNSRDGKSYSTNL---AYTPPEYLRNGRVTPESVIFSFGTVLLDLLS 854
            + A EA  + +LRH  +   +G C +  E L+V EYMP  +L + + H  + +++W     +AL IA+ ++Y    +   ++ DL ++ +L DE+   ++S FGL    K   D K+  T +    +T PE LRN   T ++ +FSF  VL ++++
Sbjct:  533 ELAQEATIMSQLRHPNICQFLGTCNNPPEILIVMEYMPLGSLYR-ILHDPSISLDWPRMKSMALDIAKGMNYLHCCDPIVIHRDLKSHNLLVDEHYRVKISDFGLSTRFKKHLDKKTAMTPVGTPCWTAPEVLRNDPYTEKADVFSFAIVLWEIVT 687          
BLAST of CX672040 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.005e-11
Identity = 53/209 (25.36%), Postives = 96/209 (45.93%), Query Frame = 3
Query:  267 FSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE----NQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSH 878
            F  D ++  S E      +    +   D+   +AVK+      P+ K+F ++   +G + H  L  LI Y    DE+L+V EYM   +L+  L H         + W  R  +AL  A A+ Y  S      H ++ +  +L  E+ + ++S + L        + +    Y  PE     +++ ++ ++SFG ++L+LL+GK   P+H
Sbjct:  336 FDLDGLLKASAEVLGKGTFGSSYKASFDHGLVVAVKRLRDVVVPE-KEFREKLQVLGSISHANLVTLIAYYFSRDEKLVVFEYMSRGSLSA-LLHGNKGSGRSPLNWETRANIALGAARAISYLHSRDATTSHGNIKSSNILLSESFEAKVSDYCLAPMISPTSTPNRIDGYRAPEVTDARKISQKADVYSFGVLILELLTGK--SPTH 540          
BLAST of CX672040 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.005e-11
Identity = 63/224 (28.12%), Postives = 105/224 (46.88%), Query Frame = 3
Query:  243 DLRAATNNFSSDFIVSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFT--KHAWPDPKQ--FADEAWGVGKLRHKRLANLIGYCCDGDE--RLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLY--HDLNAYRVLFDENGDPRLSCFGLMKN--SRDGKSY----STNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPP 872
            +L  A  +FS+       G  A + +YKG L+ G++    IAV      +  W    +  F  E   + +L H+  A L+GYC +     R+LV EY  N TL +HL + E   + WA R+++ + IA  L Y   E  P +   +L++  +   E+  P+L  F   K   +R  K+     S       P  + +  +     I++FG +LL+++SG+  PP
Sbjct:  354 ELEVACEDFSNII-----GLSADSQIYKGTLKGGSE----IAVISLCVKEEDWTGYLELYFQREVADLARLNHENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHYGEAALVSWARRMKIVIGIARGLKYLHMELDPPFTISELSSNAIYLTEDFTPKLVDFECWKTILARSEKNLRNISSQGSICVLPNGMESRYLDVSGNIYAFGILLLEIVSGR--PP 566          
BLAST of CX672040 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11
Identity = 53/200 (26.50%), Postives = 100/200 (50.00%), Query Frame = 3
Query:  318 VYKGRLQDGNDNRRWIAVKKF-TKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF---------HWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFDENGDPRLSCFGL------MKNSRDGKSYSTNLAYTPPEYLRNG-RVTPESVIFSFGTVLLDLLSGK 860
            VY+   + G      IAVKK  T     + ++F  E   +G L+H  L++  GY      +L+++E++PN +L  +L           + N  + W  R ++AL  A+AL +  ++ +P  L+ ++ +  +L DE  + +LS +GL      M +    K +   + Y  PE  +   R + +  ++S+G VLL+L++G+
Sbjct:  607 VYRASFEGGVS----IAVKKLETLGRIRNQEEFEQEIGRLGGLQHPNLSSFQGYYFSSTMQLILSEFVPNGSLYDNLHLRIFPGTSSSYGNTDLNWHRRFQIALGTAKALSFLHNDCKPAILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGR 802          
BLAST of CX672040 vs. ExPASy Swiss-Prot
Match: ROR1_DROME (Tyrosine-protein kinase transmembrane receptor Ror OS=Drosophila melanogaster GN=Ror PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 55/200 (27.50%), Postives = 96/200 (48.00%), Query Frame = 3
Query:  285 VSESGEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQ-FADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH---WENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTN------LAYTPPEYLRNGRVTPESVIFSFGTVLLDLLS 854
            + E GE A   VYKG+L   N     +A+K   ++A    +Q F  E   +  L+H+ +  ++G   + +   ++ EYM N  L + L      E +++     L++AL I+E + Y S+    ++ DL A   L +E    ++S FGL ++      Y         + + P E +  G+ T ES ++SFG VL ++ S
Sbjct:  413 LEELGEGAFGKVYKGQLLQPNKTTITVAIKALKENASVKTQQDFKREIELISDLKHQNIVCILGVVLNKEPYCMLFEYMANGDLHEFLISNSPTEGKSLSQLEFLQIALQISEGMQYLSAH-HYVHRDLAARNCLVNEGLVVKISDFGLSRDIYSSDYYRVQSKSLLPVRWMPSESILYGKFTTESDVWSFGVVLWEIYS 611          
BLAST of CX672040 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.834e-11
Identity = 54/207 (26.09%), Postives = 99/207 (47.83%), Query Frame = 3
Query:  261 NNFSSDFIVSES----GEKAPNVVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKL-RHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGK 860
            +NF  + ++  S    G+ +    YK  L+D         V K  +      K+F  +   VGK+ +H     L+ Y    DE+LLV +YM   +L   + H    ++ ++W  R+++A   ++A+ Y  S  + ++ D+ +  +L  E+ +P LS   L+            + Y  PE +   RV+  S ++SFG V+L++L+GK
Sbjct:  338 HNFDLEDLLKASAEVLGKGSFGTAYKAVLEDTT-----AVVVKRLREVVASKKEFEQQMEIVGKINQHSNFVPLLAYYYSKDEKLLVYKYMTKGSLFG-IMHGNRGDRGVDWETRMKIATGTSKAISYLHSL-KFVHGDIKSSNILLTEDLEPCLSDTSLVTLFNLPTHTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGK 537          
BLAST of CX672040 vs. ExPASy Swiss-Prot
Match: DRKB_DICDI (Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.620e-11
Identity = 47/164 (28.66%), Postives = 80/164 (48.78%), Query Frame = 3
Query:  363 IAVKKFTKHAWPDP--KQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYH-DLNAYRVLFDENGDPRLSCFGLMKNSRDGKSYST--NLAYTPPEYLRNGRVTPESVIFSFGTVL 839
            +AVKK   H   +   K+F  E   +  LRH  +   +G C    +  +  EYMP  +L   + H E   I W++  R+ +  A+ + Y       + H DL ++ +L DEN   +++ FGL    + G + +      +T PE LR+ R T ++ ++SFG +L
Sbjct:  415 VAVKKLPAHNINENILKEFHREINLMKNLRHPNVIQFLGSCLISPDICICTEYMPRGSLYS-ILHNEKIKISWSLVKRMMIDAAKGIIYLHGSTPVILHRDLKSHNLLVDENWKVKVADFGLSTIEQQGATMTACGTPCWTSPEVLRSQRYTEKADVYSFGIIL 577          
BLAST of CX672040 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.951e-11
Identity = 56/200 (28.00%), Postives = 85/200 (42.50%), Query Frame = 3
Query:  318 VYKGRLQDGND----------NRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGD--ERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHD---LNAYRVLFDENGDPRLSCFGLMKNSRDGKSYSTNLAYT----PPEYLRNGRVTPESVIFSFGTVLLDLLSGK 860
            VYKG L  G +           R W    + T     D          + ++ HK   NLIGYC + +   R++V EY PN TL +HL   E + ++W  R R+ +  A  L Y      P+ H     +A  +  D         F     S+  K  S +L  +    PPE        PE+ ++SFG ++L+++SGK
Sbjct:  415 VYKGTLSSGVEIAVASTAILETREWTRAMEMTYRRRIDT---------MSRVNHKNFINLIGYCEEDEPFNRMMVFEYAPNGTLFEHLHDKEMEHLDWNARTRIIMGTAYCLQYMHELNPPISHTKLVSSAIYLTDDYAAKVGEVPFSGQTGSKPRKPMSGDLDQSLLPLPPE--------PETNVYSFGVLMLEIISGK 597          
The following BLAST results are available for this feature:
BLAST of CX672040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 248
Match NameE-valueIdentityDescription
DRKC_DICDI6.892e-1230.77Probable serine/threonine-protein kinase drkC OS=D... [more]
Y5659_ARATH2.005e-1125.36Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y1634_ARATH2.005e-1128.13Probable LRR receptor-like serine/threonine-protei... [more]
Y1124_ARATH2.619e-1126.50Probable LRR receptor-like serine/threonine-protei... [more]
ROR1_DROME3.420e-1127.50Tyrosine-protein kinase transmembrane receptor Ror... [more]
Y5516_ARATH5.834e-1126.09Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
DRKB_DICDI7.620e-1128.66Probable serine/threonine-protein kinase drkB OS=D... [more]
Y5458_ARATH9.951e-1128.00Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14F02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14F02-K4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672040 ID=CX672040; Name=CX672040; organism=Citrus sinensis; type=EST; length=912bp
CTTCAGCTGCTGAGCTGGGGGGTTTGGTTGGTTCATTTCTTCTGAGTCAA
CTCGGCCGAGTTATGGGCTGTTGCGAATCAACCTTCTTAAAAGGACACCT
CTCGGTTGATACCAAAAATCGCCACCACCACCAACAGAATCACCGCAATC
ATCCGACTCAGCCGTCTAATGGTACTGAGGGCTCAGGCGGACTCGCTGCC
GGCTCAGATGGCGCGCCGGCTTTCGCCGAGTTCTCCTTAGCCGACCTCAG
AGCCGCTACGAATAACTTCAGTTCTGATTTTATCGTATCCGAGAGCGGCG
AAAAGGCTCCCAATGTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGAT
AACCGCCGTTGGATCGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGA
TCCCAAACAGTTTGCTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATA
AGAGGCTGGCGAATTTGATTGGCTATTGTTGTGATGGTGATGAGAGATTG
CTGGTGGCTGAGTACATGCCAAATGATACTCTTGCTAAACATTTATTTCA
CTGGGAGAATCAAACCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGT
ATATTGCTGAAGCTTTAGATTATTGCAGTAGTGAAGGACGTCCATTATAC
CATGATTTGAATGCTTATAGGGTTCTCTTTGATGAGAATGGTGATCCTCG
GCTTTCATGTTTTGGCTTGATGAAAAATAGTAGGGATGGAAAAAGTTACA
GCACAAATCTTGCCTATACTCCTCCAGAGTACCTAAGAAATGGAAGGGTC
ACTCCAGAAAGTGTTATTTTCAGCTTCGGGACTGTCCTTTTGGATCTTCT
CAGTGGAAAGCATATTCCCCCTAGTCATGCACTTGATATGATTCGGGGAA
AGATATTCTTCA
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