CX672036

Overview
NameCX672036
Unique NameCX672036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.356e-12
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = -2
Query:  724 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQVIT 906
            CP+P+L  GL  HTD   + +L QD +V+GLQ+LKD +W+ V P+ ++ V+N+GDQL+VIT
Sbjct:  165 CPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVIT 225          
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = -2
Query:  724 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQVIT 906
            CP P+L  GL  HTD   + +L QD  V GLQ+LKD +WV V P+ ++ V+N+GDQL+VIT
Sbjct:  171 CPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVIT 231          
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12
Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = -2
Query:  724 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQVIT 906
            CP P+L  GL  HTD   + +L QD  V GLQ+LKD +WV V P+ ++ V+N+GDQL+VIT
Sbjct:  171 CPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPMRHSIVVNLGDQLEVIT 231          
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.855e-12
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = -2
Query:  724 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQVIT 906
            CP+P+L  GL  HTD   + +L QD +V+GLQ+LKD +W+ V P+ ++ VIN+GDQ++VIT
Sbjct:  165 CPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVIT 225          
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.855e-12
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = -2
Query:  724 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQVIT 906
            CP+P+L  GL  H+D   + +L QD +V+GLQ+LKD +WV V P+ ++ VIN+GDQ++VIT
Sbjct:  165 CPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPMHHSIVINLGDQIEVIT 225          
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.953e-12
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = -2
Query:  724 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQVIT 906
            CPEPE T G   H DP ALTILLQD +V GL+VL D +W  V+P+P A VINIGD    ++
Sbjct:  237 CPEPERTLGTGPHCDPTALTILLQD-DVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALS 296          
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.953e-12
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = -2
Query:  724 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQVIT 906
            CPEPE T G   H DP ALTILLQD +V GL+VL D +W  V+P+P A VINIGD    ++
Sbjct:  237 CPEPERTLGTGPHCDPTALTILLQD-DVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALS 296          
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.953e-12
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = -2
Query:  733 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQ 906
            CP+P   YGL  HTD + LTIL QD +V GLQ++KD++W+AV P P A +INIGD  Q
Sbjct:  203 CPKPSEVYGLMPHTDSDFLTILYQD-QVGGLQLIKDNRWIAVKPNPKALIINIGDLFQ 259          
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.953e-12
Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = -2
Query:  724 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQVIT 906
            CP P+L  G+  HTD +ALT+L+ + EV GLQV KDD+W+    +PNA VI+IGDQ+++++
Sbjct:  209 CPRPDLALGVVAHTDLSALTVLVPN-EVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILS 268          
BLAST of CX672036 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.953e-12
Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = -2
Query:  724 CPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQVIT 906
            CP+P+L  GL  HTD   + +L QD +V GLQ+LKD +W+ V P+  + V+N+GDQL+VIT
Sbjct:  165 CPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVIT 225          
The following BLAST results are available for this feature:
BLAST of CX672036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
ACCO1_PETHY2.356e-1250.821-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO1_ORYSJ3.077e-1252.461-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSI3.077e-1252.461-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO2_MALDO6.855e-1250.821-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO1_MALDO6.855e-1250.821-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
GAOX2_ORYSJ8.953e-1257.38Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI8.953e-1257.38Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
G2OX8_ARATH8.953e-1256.90Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FLS_CITUN8.953e-1250.82Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
ACCO_TOBAC8.953e-1250.821-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14E12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E12-I24-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672036 ID=CX672036; Name=CX672036; organism=Citrus sinensis; type=EST; length=907bp
GAAAAGTGGAGCTACTAATATGAATGATGGGAGTCAGATACATCACTACT
CAAAGGTTAAAACAATGACGGAGTTTGCACACGAAAGTCAGCCCATACAC
ATAAAATCTAAAATTAAATGCAATACTAAAGGAGATAGAAATTGGCGGCA
CATTGCAATTACTCACGGTAGATTGACATCATTGGTTGCGAAGCCCAGGC
GCTGAGGAGAATCCCCAATGCATGCAGGAATAAGGCAGCTGCTAGCTAGT
TCTTGAAAAGTTCCAAACAATGTTCTTGGTCCAAGTTTCTGCTCCAAAAC
TTGCTGTAATATTCAGCATATGTGAAATCTCTGTATACGGCTCCAGATCC
ATCCTCTGTTAATGCTTTTGGAGGGCTGATCATTGCATCATTATTTGGGC
AAAGGAATGAAGCAACCGACATCCTTGCCTTTTCAGCATTCACAATAGCT
CTATGCCACACACTCTTATACCTTCCATTACTCAATGCCTACAGTTAATG
TCACTAAAATGTATTACCCGATGAATATTGATAATAAGCCATGCTCAGGT
CCACATTCGAATATTCTAAAATTTGGTGAATTGTACAATAAGGCACAACT
ATGATTCTAGTTCAAATCCAAATTTTACAAAATCCAGACATGCGAGCTTA
GGCACCAATATATTAGTATTAATGAAAAATGAAAGCACTAATTAAATAAA
ATTAAATTAAATTAAATATTGTTAGTTATTACCTGCAGTTGATCACCAAT
ATTAATGACAAAGGCATTAGGAAGGGGATTAACAGCAACCCATTTGTCGT
CTTTGAGAACTTGAAGACCTGCCACTTCTAAATCTTGCAATAAAATGGTA
AGGGCATTTGGGTCAGTGTGTCCTGGCAATCCATAAGTAAGCTCTGGCTC
TGGACAT
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