CX672034

Overview
NameCX672034
Unique NameCX672034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length949
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_SYNY3 (Glucose-6-phosphate 1-dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=zwf PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.408e-31
Identity = 79/211 (37.44%), Postives = 112/211 (53.08%), Query Frame = -3
Query:  306 LENV-MXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLK--ELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRW 929
            LEN  + GQYK    G K  P Y ++P V   S TPTF A  L ++N RW GVPF ++  K +  K +EI +QFR VP  +++           N L LR+QP E I L+   K+PG  +R    D++  Y S +     DAY RL+LD + G++ LF R+DE++ AW + TP+L   +     +   LY  G+  P  A +L  K   RW
Sbjct:  299 LENAGIRGQYKAGWMGGKPVPGYREEPGVDPSSTTPTFAALKLMVDNWRWQGVPFYLRTGKRMPKKVSEIAIQFRQVPLLIFQ---SVAHQANPNVLSLRIQPNEGISLRFEAKMPGSELRTRTVDMDFSYGSSFGVAAADAYHRLLLDCMLGDQTLFTRADEVEEAWRVVTPVLSAWDAPSDPLSMPLYEAGTWEPAEAEWLINKDGRRW 506          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_THEMA (Glucose-6-phosphate 1-dehydrogenase OS=Thermotoga maritima GN=zwf PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 4.097e-31
Identity = 80/223 (35.87%), Postives = 119/223 (53.36%), Query Frame = -3
Query:  297 SMQPLLLEN----VMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLK--ELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGDL 947
            S++P  +E     ++ GQY       K  PAY ++P V K S   TF A  LFI+N RW GVPF +++ K L  K  E+ V F+ +P +++      +L+   N +V  LQP E I L+   K P  GM      ++  Y   +  ++PDAYERL+LD I G+  LF+R D+L+ +W L  P+LK  E +  +  P +YP G+ GP  A  L  +   +W  L
Sbjct:  276 SIRPFPVEELESWIVRGQYGRGVVNGKEVPAYREEPGVAKDSNVETFVAMKLFIDNWRWSGVPFYLRSGKRLPKKITEVAVVFKKIPHSIFAGVPSDELE--PNTIVFTLQPNEGISLEFQVKRPCPGMFPQLLSMDFRYEDYFGVKLPDAYERLLLDVILGDPTLFMRRDDLEVSWELLDPVLKAWENDPVRFSPYVYPAGTWGPREADLLIERDGRKWRKL 496          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_SYNE7 (Glucose-6-phosphate 1-dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=zwf PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 7.727e-30
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = -3
Query:  306 NVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVP--ELYPYGSRGPVRAHYLAAKHNVRW 923
            + + GQYK      +S PAY D+      S TPT+ A  L ++N RW GVPF ++  K +  K  EI +QF+ VP  +++    T    + N LVLR+QP E + L+   K PG   R    D++  Y + + +   +AY RL++D + G++ LF R+DE++A+W + TPLL+  ++ +       Y  G+  P  A  L  +   RW
Sbjct:  303 SAVRGQYKAGWMNGRSVPAYRDEEGADPQSFTPTYVAMKLLVDNWRWQGVPFYLRTGKRMPKKVTEIAIQFKTVPHLMFQS--ATQKVNSPNVLVLRIQPNEGVSLRFEVKTPGSSQRTRSVDMDFRYDTAFGSPTQEAYSRLLVDCMLGDQTLFTRADEVEASWRVVTPLLESWDDPRQAAGISFYEAGTWEPAEAEQLINRDGRRW 508          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_BUCBP (Glucose-6-phosphate 1-dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=zwf PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.543e-29
Identity = 76/215 (35.35%), Postives = 119/215 (55.35%), Query Frame = -3
Query:  300 ENVMXGQYKG---HNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGM--RLDCSDLNLLYRSRYPT-EIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGD 926
            +NV+ GQY     + K  KSY   T++        T TF +  ++I+N +W GVPF ++  K L  K +EI + F+  P N++ +N+ T    + NKL+L LQP EAI + I NK P L    +LD   L+  Y   Y   ++ DAYE+L+L++++G + LF+R DE++ AW      L+ L  K  +P+LYP G+ GP R+  +       W +
Sbjct:  279 KNVILGQYTSGIINQKKVKSYLDETNNQEYQMNKYTETFVSMKIYIDNDQWSGVPFYLRTGKRLPKKCSEIVIFFKTPPLNIFSKNYNT---LSKNKLILSLQPNEAIKIYILNKKPKLTSQYKLDLITLDFNYSKFYKKIQLSDAYEKLLLESMKGIQSLFVRRDEVELAWKWIDSTLQCLHLKPRLPDLYPAGTWGPARSKTMINNDGYEWNE 490          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_CHLPN (Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia pneumoniae GN=zwf PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.457e-28
Identity = 76/211 (36.02%), Postives = 108/211 (51.18%), Query Frame = -3
Query:  297 NVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPEL--YPYGSRGPVRAHYLAAKHNVRWGDL 923
            +++ GQY        S   Y ++  V K S   T+ A    INN RW GVPF ++A K L  K  +I + F+  P NL+     +      + L++R+QP E + LK N KVPG    +    ++  Y S + T  P+AYERL+ D I G+R LF   DE+ A+W LFTP+L+E ++    P    YP GS GP  A  L  +    W  L
Sbjct:  303 SIVRGQYGPGTVQGVSVLGYREEENVDKDSRVETYVALKTVINNPRWLGVPFYLRAGKRLAKKSTDISIIFKKSPYNLFAAEECSRCPIENDLLIIRIQPDEGVALKFNCKVPGTNNIVRPVKMDFRYDSYFQTTTPEAYERLLCDCIIGDRTLFTGGDEVMASWKLFTPVLEEWDQDS-SPSFPNYPAGSSGPKEADALIERDGRSWRPL 512          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_ECOLI (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli (strain K12) GN=zwf PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.589e-27
Identity = 73/212 (34.43%), Postives = 111/212 (52.36%), Query Frame = -3
Query:  300 ENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMR--LDCSDLNLLYRSRY-PTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGD 926
            E  + GQY       K  P Y ++    K S T TF A  + I+N RW GVPF ++  K L TK +E+ V F+    NL+K ++    D   NKL +RLQP E + +++ NKVPGL  +  L  + L+L Y   +  T + DAYERL+L+ + G + LF+R DE++ AW     + +        P+ Y  G+ GPV +  +  +    W +
Sbjct:  281 EKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKESW---QDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNE 489          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_ECOL6 (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli O6 GN=zwf PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.589e-27
Identity = 73/212 (34.43%), Postives = 111/212 (52.36%), Query Frame = -3
Query:  300 ENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMR--LDCSDLNLLYRSRY-PTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGD 926
            E  + GQY       K  P Y ++    K S T TF A  + I+N RW GVPF ++  K L TK +E+ V F+    NL+K ++    D   NKL +RLQP E + +++ NKVPGL  +  L  + L+L Y   +  T + DAYERL+L+ + G + LF+R DE++ AW     + +        P+ Y  G+ GPV +  +  +    W +
Sbjct:  281 EKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKESW---QDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNE 489          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_ECO57 (Glucose-6-phosphate 1-dehydrogenase OS=Escherichia coli O157:H7 GN=zwf PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.589e-27
Identity = 73/212 (34.43%), Postives = 111/212 (52.36%), Query Frame = -3
Query:  300 ENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMR--LDCSDLNLLYRSRY-PTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRWGD 926
            E  + GQY       K  P Y ++    K S T TF A  + I+N RW GVPF ++  K L TK +E+ V F+    NL+K ++    D   NKL +RLQP E + +++ NKVPGL  +  L  + L+L Y   +  T + DAYERL+L+ + G + LF+R DE++ AW     + +        P+ Y  G+ GPV +  +  +    W +
Sbjct:  281 EKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFYLRTGKRLPTKCSEVVVYFKTPELNLFKESW---QDLPQNKLTIRLQPDEGVDIQVLNKVPGLDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVDSITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNE 489          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_PSEAE (Glucose-6-phosphate 1-dehydrogenase OS=Pseudomonas aeruginosa GN=zwf PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.688e-27
Identity = 73/212 (34.43%), Postives = 107/212 (50.47%), Query Frame = -3
Query:  306 LLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLG--MRLDCSDLNLLYRSRY-PTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIVPELYPYGSRGPVRAHYLAAKHNVRW 932
            L   V+ GQY       K+ P Y ++    + S   TF A  + I N RW GVPF ++  K +  K ++I + F+  P  ++           +N+L++RLQP E I L++  K  GLG  M+L    L L +   Y    IPDAYERL+L+  +G + LF+R DE++ AW     L+   E     P+ YP GS GPV +  L A+    W
Sbjct:  277 LASRVVRGQYTAGFSDGKAVPGYLEEEHANRDSDAETFVALRVDIRNWRWSGVPFYLRTGKRMPQKLSQIVIHFKEPPHYIFAPE---QRSLISNRLIIRLQPDEGISLQVMTKDQGLGKGMQLRTGPLQLSFSETYHAARIPDAYERLLLEVTQGNQYLFVRKDEVEFAWKWCDQLIAGWERLSEAPKPYPAGSWGPVASVALVARDGRSW 485          
BLAST of CX672034 vs. ExPASy Swiss-Prot
Match: G6PD_ANASP (Glucose-6-phosphate 1-dehydrogenase OS=Anabaena sp. (strain PCC 7120) GN=zwf PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.688e-27
Identity = 69/212 (32.55%), Postives = 107/212 (50.47%), Query Frame = -3
Query:  306 LLENVMXGQYKGHNKGSKSYPAYTDDPTVPKGSLTPTFTAAALFINNARWDGVPFLMKAVKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNKLVLRLQPGEAIYLKINNKVPGLGMRLDCSDLNLLYRSRYPTEIPDAYERLVLDAIEGERRLFIRSDELDAAWALFTPLLKELE---EKKIVPELYPYGSRGPVRAHYLAAKHNVRW 932
            L  + + GQY       +  P Y  +P V   S TPT+      ++N RW GVPF ++  K +  K +EI + FR VP  +++        +  N L +R+QP E I L+ + K+PG   R    D++  Y S       DAY+RL LD + G++ LF R+DE++AAW + TP L   +   +   +P+ Y  G+  P  A +L  +   RW
Sbjct:  299 LSRSAIRGQYSAGWMKGQQVPGYRTEPGVDPNSSTPTYVGMKFLVDNWRWQGVPFYLRTGKRMPKKVSEISIHFRDVPSRMFQ---SAAQQRNANILAMRIQPNEGISLRFDVKMPGAEFRTRSVDMDFSYGSFGIEATSDAYDRLFLDCMMGDQTLFTRADEVEAAWQVVTPALSVWDSPADPATIPQ-YEAGTWEPAEAEFLINQDGRRW 506          
The following BLAST results are available for this feature:
BLAST of CX672034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
G6PD_SYNY31.408e-3137.44Glucose-6-phosphate 1-dehydrogenase OS=Synechocyst... [more]
G6PD_THEMA4.097e-3135.87Glucose-6-phosphate 1-dehydrogenase OS=Thermotoga ... [more]
G6PD_SYNE77.727e-3033.65Glucose-6-phosphate 1-dehydrogenase OS=Synechococc... [more]
G6PD_BUCBP8.543e-2935.35Glucose-6-phosphate 1-dehydrogenase OS=Buchnera ap... [more]
G6PD_CHLPN1.457e-2836.02Glucose-6-phosphate 1-dehydrogenase OS=Chlamydia p... [more]
G6PD_ECOLI3.589e-2734.43Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_ECOL63.589e-2734.43Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_ECO573.589e-2734.43Glucose-6-phosphate 1-dehydrogenase OS=Escherichia... [more]
G6PD_PSEAE4.688e-2734.43Glucose-6-phosphate 1-dehydrogenase OS=Pseudomonas... [more]
G6PD_ANASP4.688e-2732.55Glucose-6-phosphate 1-dehydrogenase OS=Anabaena sp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_14E11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E11-I22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672034 ID=CX672034; Name=CX672034; organism=Citrus sinensis; type=EST; length=949bp
CATTTATTCACAAATCTTAAATTTCCTTTTATACGCCTATTATTATTCAT
CCTGTTTACACTGATCACCAACTTACAATCAAATTCAAATCATTCAACCT
TCCAAATGATACATCATCCATAAGAATTCAAGCCCCGGTACCATGTAGGT
CAAGGAAAATTGCACCATAGCACAAATTTCAGGCACCGGAATGAGTAACT
GCTGTGCTGTTCATATAACCAGCCCTGTCATGGGTTTATGGTGAATAAGT
ATGTAAAACAACCCGAGTTTTTGGCCATTCATGAATCCTCTCCACTAAGA
TCTCCCCATCGAACATTGTGCTTGGCAGCAAGATAATGTGCTCTAACTGG
TCCTCGGCTACCATAAGGATAGAGCTCTGGAACAATCTTCTTCTCTTCCA
GTTCCTTCAGTAATGGTGTAAACAACGCCCAGGCAGCATCAAGCTCATCA
CTCCGAATAAACAACCTCCGTTCACCTTCTATTGCATCTAAGACCAGCCT
CTCATATGCATCTGGTATTTCTGTTGGATACCTTGATCGATAAAGCAAAT
TAAGGTCGCTGCAATCCAATCTCATTCCAAGACCAGGAACTTTGTTGTTG
ATCTTCAAGTATATAGCTTCACCAGGCTGGAGTCGGAGCACAAGCTTATT
TGTAGCCTTGTCTAAGTCAGTTCCAAAATTCCGCTTGTACAGGTTTCCAG
GGACATGTCTGAACTGAACTCTGATCTCTGCACGTTTGGTATGGAGCGCT
TTGACTGCTTTCATCAGGAAAGGAACCCCATCCCATCTTGCATTGTTGAT
AAAAAGAGCAGCCGCGGTAAATGTTGGCGTGAGACTACCCTTTGGCACAG
TTGGGTCATCAGTATATGCAGGATATGATTTACTACCCTTGTTGTGGCCC
TTGTATTGACCAANCATTACATTTTCAAGCAGAAGTGGTTGCATTGATC
back to top