CX046126

Overview
NameCX046126
Unique NameCX046126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_SALTY (Phosphoribosylamine--glycine ligase OS=Salmonella typhimurium GN=purD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.589e-22
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = -2
Query:  314 LAACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRALPQKQ 670
            LAAC G+L   T  W   +++ VV+A+ GYPGSY  G  I  L   E+VA   K+FHAGT L  D   + +GGRVL  TA G  V EA+ RAY  + +I W G F R DIGWRA+ ++Q
Sbjct:  312 LAACDGKLDEKTSEWDERASLGVVIAAGGYPGSYSTGDEIHGLP-LEEVADG-KVFHAGTKLADDDRVLTSGGRVLCATALGHTVAEAQKRAYALMTDIRWDGSFSRNDIGWRAIEREQ 428          
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_SALTI (Phosphoribosylamine--glycine ligase OS=Salmonella typhi GN=purD PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.589e-22
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = -2
Query:  314 LAACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRALPQKQ 670
            LAAC G+L   T  W   +++ VV+A+ GYPGSY  G  I  L   E+VA   K+FHAGT L  D   + +GGRVL  TA G  V EA+ RAY  + +I W G F R DIGWRA+ ++Q
Sbjct:  312 LAACDGKLDEKTSEWDERASLGVVIAAGGYPGSYSTGDEIHGLP-LEEVADG-KVFHAGTKLADDDRVLTSGGRVLCATALGHTVAEAQKRAYALMTDIRWDGSFSRNDIGWRAIEREQ 428          
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_ECOLI (Phosphoribosylamine--glycine ligase OS=Escherichia coli (strain K12) GN=purD PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.767e-22
Identity = 57/119 (47.90%), Postives = 73/119 (61.34%), Query Frame = -2
Query:  314 LAACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRALPQKQ 670
            LAAC  +L   T  W   +++ VVMA+ GYPG Y  G VI  L   E+VA   K+FHAGT L  D   +  GGRVL VTA G  V EA+ RAY  + +I+W   F R+DIGWRA+ ++Q
Sbjct:  312 LAACESKLDEKTSEWDERASLGVVMAAGGYPGDYRTGDVIHGLP-LEEVAGG-KVFHAGTKLADDEQVVTNGGRVLCVTALGHTVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQ 428          
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_PHEZH (Phosphoribosylamine--glycine ligase OS=Phenylobacterium zucineum (strain HLK1) GN=purD PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.678e-21
Identity = 52/101 (51.49%), Postives = 66/101 (65.35%), Query Frame = -2
Query:  326 WSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRAL 628
            W   +A+ VV+A+KGYPG+   G  I+ L++   +   V +FHAGT  DADG   A GGRVL V A+G D+  ARDRAY A+E I +  GF R DIGWRAL
Sbjct:  323 WRDEAAVCVVIAAKGYPGTPAAGGEIRGLDQ--DLGDDVVVFHAGTKRDADGTLRAAGGRVLNVCARGADLRTARDRAYAAIERIEFADGFCRSDIGWRAL 421          
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_PSEAE (Phosphoribosylamine--glycine ligase OS=Pseudomonas aeruginosa GN=purD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.192e-21
Identity = 56/118 (47.46%), Postives = 73/118 (61.86%), Query Frame = -2
Query:  314 AACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRALPQKQ 667
            AA    L  V   W P   + VV+A+ GYPG Y KG VI+ L EA   A   K+FHAGTAL  DG  + +GGRVL  TA G+ V  A+ +AY   E+I W G FYR+DIG+RA+ +++
Sbjct:  312 AALAKALDKVEATWDPRPTVGVVLAAGGYPGDYAKGEVIEGLAEA--AALDGKVFHAGTALK-DGQVVTSGGRVLCATAIGESVSAAQQQAYRLAEKIRWNGCFYRKDIGYRAIARER 426          
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_XYLFA (Phosphoribosylamine--glycine ligase OS=Xylella fastidiosa GN=purD PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.882e-21
Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = -2
Query:  305 AACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRALPQKQFAT 667
            AA  G+L  V   W P  ++ VVMA++ YP +   G +I  L+    +  +VK+FHAGTALDA G  +  GGRVL VTA G +V EA+  AY  V  ++W   F R DIGWRA+ ++   T
Sbjct:  313 AALNGDLDKVQAQWDPRPSLGVVMAARPYPKAPITGEIISGLDA---LPANVKVFHAGTALDAAGCVVTAGGRVLCVTALGSNVSEAQRHAYAGVASLHWANAFQRSDIGWRAIMREHTVT 430          
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_PSEPK (Phosphoribosylamine--glycine ligase OS=Pseudomonas putida (strain KT2440) GN=purD PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.328e-21
Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = -2
Query:  314 AACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRALPQKQ 667
            AA    L  V   W P  ++ VV+A+ GYPG Y KG VI  L+ A ++    K+FHAGTAL  DG     GGRVL  TA G  V +A+ +AY   +E++W G FYR DIG+RA+ +++
Sbjct:  312 AAFAKALDKVEAQWDPRPSLGVVLAAGGYPGDYAKGDVINGLDAAAKIEG--KVFHAGTALK-DGKVTTNGGRVLCATAMGSTVADAQQQAYRLAKEVSWNGSFYRSDIGYRAIARER 426          
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_VIBPA (Phosphoribosylamine--glycine ligase OS=Vibrio parahaemolyticus GN=purD PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.421e-20
Identity = 52/119 (43.70%), Postives = 74/119 (62.18%), Query Frame = -2
Query:  314 LAACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRALPQKQ 670
            LAA   +L  V   W P +++ +V+A+ GYP +Y KG VI  L + E      K+FHAGT  + DG+ +  GGRVL  TA G  V EA+ RAY   ++I+W G F+R DIG+RA+ ++Q
Sbjct:  312 LAAIDEKLDQVESKWDPRASIGIVLAAGGYPAAYNKGDVISGLPQVE--IEGEKVFHAGTD-NQDGDIVTNGGRVLCATALGNSVSEAQQRAYELAKQISWDGMFHRNDIGYRAIAREQ 427          
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_VIBCH (Phosphoribosylamine--glycine ligase OS=Vibrio cholerae GN=purD PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.855e-20
Identity = 54/118 (45.76%), Postives = 70/118 (59.32%), Query Frame = -2
Query:  314 AACRGELTGVTLNWSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRALPQKQ 667
            AA  G+L  V   W P +++ VV+A+ GYPG Y KG VI  L   E      K+FHAGT    D   +  GGRVL  TA G  V EA+ RAY   ++I+W G F RRDIG+RA+ ++Q
Sbjct:  313 AAIAGKLDQVESKWDPRASIGVVLAAGGYPGDYAKGEVISGLPTQESAGQ--KVFHAGTETQGD-QVVTNGGRVLCATALGNTVLEAQQRAYQLADQIHWNGMFCRRDIGYRAIAREQ 427          
BLAST of CX046126 vs. ExPASy Swiss-Prot
Match: PUR2_CAUCR (Phosphoribosylamine--glycine ligase OS=Caulobacter crescentus GN=purD PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.855e-20
Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = -2
Query:  317 LAACRGELTGVTL-NWSPGSAMVVVMASKGYPGSYEKGSVIQNLEEAEQVAPSVKIFHAGTALDADGNFIATGGRVLGVTAKGKDVEEARDRAYLAVEEINWPGGFYRRDIGWRALPQK 670
            LAA +GEL       W   +A+ VV+A++GYP + + G  IQ  +        V +FHAGT  + +G  +A+GGRVL V A G  + EAR+ AY A+E I+  GGFYR DIGWRAL Q+
Sbjct:  311 LAAAKGELANAEPPKWREEAAICVVLAAEGYPDAPKTGGRIQGADA--DFGDDVVVFHAGTTREFEGRLVASGGRVLNVCALGATLSEAREAAYGALETISLEGGFYRTDIGWRALQQR 427          
The following BLAST results are available for this feature:
BLAST of CX046126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
PUR2_SALTY2.589e-2247.90Phosphoribosylamine--glycine ligase OS=Salmonella ... [more]
PUR2_SALTI2.589e-2247.90Phosphoribosylamine--glycine ligase OS=Salmonella ... [more]
PUR2_ECOLI5.767e-2247.90Phosphoribosylamine--glycine ligase OS=Escherichia... [more]
PUR2_PHEZH1.678e-2151.49Phosphoribosylamine--glycine ligase OS=Phenylobact... [more]
PUR2_PSEAE2.192e-2147.46Phosphoribosylamine--glycine ligase OS=Pseudomonas... [more]
PUR2_XYLFA4.882e-2143.80Phosphoribosylamine--glycine ligase OS=Xylella fas... [more]
PUR2_PSEPK8.328e-2144.92Phosphoribosylamine--glycine ligase OS=Pseudomonas... [more]
PUR2_VIBPA1.421e-2043.70Phosphoribosylamine--glycine ligase OS=Vibrio para... [more]
PUR2_VIBCH1.855e-2045.76Phosphoribosylamine--glycine ligase OS=Vibrio chol... [more]
PUR2_CAUCR1.855e-2045.38Phosphoribosylamine--glycine ligase OS=Caulobacter... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_6A01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-6A01-B2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX046126 ID=CX046126; Name=CX046126; organism=Citrus sinensis; type=EST; length=674bp
TTTTTAGCTGAACCAATTACAGCTTGTGGGTATACAATTCGCACAACCGT
AATTCTCTTAGTATTGCATTATTAAGAAATTGCTGCACATCTTTGTTTGA
TTCATGTCAGTTAGAATACACTTTCGTTTGATTGATGTCAGTTAGAATAA
ACAATGAAGACTCCTTGGGTAACAAGGCTGAGAACCTCATCGACTGCATT
TTCCTTTGGTACATGATTCGGTAATACATGATCCATCTCAAACGTTAGAA
ACGGATAAAAAAAAAGTGCTAATTTCTGGGATCTGGACGTTAGTTTTACT
CTCTTGTAGCAAATTGCTTTTGAGGAAGTGCTCTCCATCCAATATCTCGC
CGGTAGAACCCTCCTGGCCAGTTGATTTCCTCCACTGCTAGGTAAGCTCT
ATCTCGTGCCTCTTCAACATCTTTTCCCTTTGCAGTAACCCCAAGAACAC
GGCCACCAGTGGCAATGAAGTTGCCATCCGCGTCAAGTGCTGTCCCTGCA
TGAAATATCTTTACAGAAGGAGCAACTTGTTCTGCTTCTTCGAGGTTCTG
GATCACAGATCCTTTCTCATAGGATCCGGGGTAACCTTTGCTCGCCATTA
CTACAACCATGGCAGATCCTGGGGACCAGTTCAGTGTTACCCCAGTTAAC
TCTCCTCTGCAAGCGGCAAGTCCT
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