EY664612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_PYRFU (30S ribosomal protein S4e OS=Pyrococcus furiosus GN=rps4e PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.264e-29 Identity = 81/232 (34.91%), Postives = 126/232 (54.31%), Query Frame = 3 Query: 72 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR----TIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVG-II*NREKXKGSFETIHIQDALGHEFATRLGNVFTIG 752 +G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T RE IL + LVD +VR D +P G MDVVSIP+T E++R+L + G+ LH I ++EA K ++R+ + + +N +DG +I D + T+ + + +I E + F+ G V VT G+N+ R G I+ + G + + I+D G F T F +G Sbjct: 4 KGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLPNRIGKLILHPISEDEAFIKPLRIRNKRMIKGARVQLNFHDGTNHIVSIAEKDNYFTSY-TVLMKVPEREILEVLPFEKGAYVFVTQGKNVARKGRIVEIKRFPMGWPDVVTIEDEEGELFDTLKEYAFVVG 234
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_METVS (30S ribosomal protein S4e OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps4e PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.264e-29 Identity = 74/236 (31.36%), Postives = 124/236 (52.54%), Query Frame = 3 Query: 72 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETIHIQDALGHEFATRLGNVFTIGK 755 +G +KHLKRL AP +W L + F +PS GPH + LPL+LI+R+ LK A RE I+ +L+D R + +P G MDV+SIP+ NEN+ +L+D GR L + E+ KLCK+ + + G +N +DGR ++ + + D++ + L + ++F+ GK +TGG+++ + EK + + +++ G +F T VF +G+ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKERTFTVRPSPGPHSMDKSLPLLLIVRDTLKCADNAREAKKIIQMGKILIDGVKRKEYKHPVGLMDVLSIPELNENYLVLFDENGRISLK--KTEKTGVKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVANALKAEEDIYKTGDSVLVSLPEQAVVGHVEFNEGKLAYITGGKHVGEFAKVVEVEKRTLYSDIVTLENKDGEKFKTIKPYVFIVGQ 237
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_METVA (30S ribosomal protein S4e OS=Methanococcus vannielii GN=rps4e PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.264e-29 Identity = 74/236 (31.36%), Postives = 124/236 (52.54%), Query Frame = 3 Query: 72 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETIHIQDALGHEFATRLGNVFTIGK 755 +G +KHLKRL AP +W L + F +PS GPH + LPL+LI+R+ LK A RE I+ +L+D R + +P G MDV+SIP+ NEN+ +L+D GR L + E+ KLCK+ + + G +N +DGR ++ + + D++ + L + ++F+ GK +TGG+++ + EK + + +++ G +F T VF +G+ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKERTFTVRPSPGPHSMDKSLPLLLIVRDTLKCADNAREAKKIIQMGKILIDGVKRKEYKHPVGLMDVLSIPELNENYLVLFDENGRISLK--KTEKTGVKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVANALKAEEDIYKTGDSVLVSLPEQAVVGHVEFNEGKLAYITGGKHVGEFAKVVEVEKRTLYSDIVTLENKDGEKFKTIKPYVFIVGQ 237
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_METM5 (30S ribosomal protein S4e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps4e PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.815e-29 Identity = 76/236 (32.20%), Postives = 124/236 (52.54%), Query Frame = 3 Query: 72 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETIHIQDALGHEFATRLGNVFTIGK 755 +G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L + ++A KLCK+ + + G +N +DGR + + + D++ + + I + F GK VTGG+++ I E + + +++ G +F T VF +G+ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLK--KTDKADAKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYVTGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_METM7 (30S ribosomal protein S4e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps4e PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.190e-29 Identity = 75/236 (31.78%), Postives = 123/236 (52.12%), Query Frame = 3 Query: 72 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETIHIQDALGHEFATRLGNVFTIGK 755 +G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L + ++ KLCK+ + + G +N +DGR + + + D++ + + I + F GK VTGG+++ I E + + +++ G +F T VF +G+ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLK--KTDKTDAKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYVTGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_METM6 (30S ribosomal protein S4e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps4e PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.070e-28 Identity = 74/236 (31.36%), Postives = 123/236 (52.12%), Query Frame = 3 Query: 72 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETIHIQDALGHEFATRLGNVFTIGK 755 +G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG MDV+SIP+ +EN+ +L+D GR L + ++ KLCK+ + + G +N +DGR + + + D++ + + I + F GK +TGG+++ I E + + +++ G +F T VF +G+ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDILKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDENYLVLFDESGRISLK--KTDKTDAKLCKIVNKTVIKGGHIQLNLHDGRNQIVKVSDATKAEEDVYKTGDSVLVSIPEQSIVGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_DESK1 (30S ribosomal protein S4e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps4e PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.397e-28 Identity = 77/235 (32.77%), Postives = 124/235 (52.77%), Query Frame = 3 Query: 75 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDPLINANDT------IKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETI-HIQDALGHEFATRLGNVFTIG 752 G +HLK +NAP++W + + + K S GPH LPL++++R+ L YA T +E ++ + + +D +VR D +P G MDV+ I N+ +R++ L I EEA FKLC++ + + G +N +DGR IR DP DT +KL + +I + + G +V+GGRN+ RVG I + K + +I ++D G++F T L +F IG Sbjct: 5 GGSRHLKAINAPRYWPILRKEYRWVVKSSPGPHPISRSLPLLILVRDMLGYAKTGKEARRLIAEGYFKIDGRVRRDYKFPVGVMDVIEIVGVNKYYRVIPVPTKVLGLIEISREEASFKLCRIENKTTVKNGHIQLNLHDGRNVLIRVNDPRNPVEDTYDTLGVLKLSIPVQQILDYVPLKEGVIAIVSGGRNVGRVGKIVSIHKGMRRYRSIVTLEDKQGNKFQTSLDYIFPIG 239
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_METKA (30S ribosomal protein S4e OS=Methanopyrus kandleri GN=rps4e PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.383e-28 Identity = 78/243 (32.10%), Postives = 130/243 (53.50%), Query Frame = 3 Query: 75 GLKKHLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRT--IRYPDP------LINANDTIKLDL------ETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFE-TIHIQDALGHEFATRLGNVFTIGK 755 G K+H+KRL AP W + K GG FAP+P GPH +PL++++R+ L YA RE I+ + + VD VR + +P G MDVV IP+T + +R++ + R + I +EEA+ K+C++++ + + G I +DG+ + DP + + D++ L+L E+ K+ + I F+ G V GR+ VG + + +G E I +++ G +F T G + IGK Sbjct: 7 GPKRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKIITRGEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVCRIKNKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVVDHIPFEEGVWVYAMTGRHSGEVGRVVEIQTFEGPQEDLITVENPEGDQFQTTKGRLIAIGK 249
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_METMP (30S ribosomal protein S4e OS=Methanococcus maripaludis GN=rps4e PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.933e-28 Identity = 72/236 (30.51%), Postives = 121/236 (51.27%), Query Frame = 3 Query: 72 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR--------TIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETIHIQDALGHEFATRLGNVFTIGK 755 +G +KHLKRL AP +W L + F +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG MDV+SIP+ +E + +L+D GR L + ++ KLCK+ + + G +N +DGR + + + D++ + + I + F GK +TGG+++ I E + + +++ G +F T VF +G+ Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLK--KTDKTDVKLCKIVNKTVVKGGNIQLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTLENKDGEKFKTVKPYVFIVGQ 237
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_KORCO (30S ribosomal protein S4e OS=Korarchaeum cryptofilum (strain OPF8) GN=rps4e PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.545e-27 Identity = 76/229 (33.19%), Postives = 119/229 (51.97%), Query Frame = 3 Query: 75 GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETIHIQDALGHEFATR--LGNVFTIGK 755 G +HLK L AP ++ + K + KPS GPH E +PL+LI+R+ LK A T RE I+ + +LVD K R D + G MDV+SIP+ N+R++ D RL I E+K KL KV + + G + ++DGR + D++ ++L + + + ++FD G V+VT GR R+G + +G I ++D E + R N+ +GK Sbjct: 5 GGSRHLKSLAAPGYYPIAKRERVWVVKPSPGPHAIDEGIPLLLIVRDMLKLATTAREARRIISMKKILVDGKPRYDYKFQVGLMDVISIPEIGVNYRMVPDPHRFLRLIEIPQSESKMKLVKVIGKRTIRGGRIQLTSHDGRNFLLDGRDVKPGDSLLIELPSQSVIDHLRFDTGSSVLVTRGRMAGRIG------RVEGIGTIIEMRDLENPELSYRGVKENLIVVGK 227 The following BLAST results are available for this feature:
BLAST of EY664612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY664612 ID=EY664612; Name=EY664612; organism=Citrus sinensis; type=EST; length=917bpback to top |