EY664612
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4_BIGNA (40S ribosomal protein S4 OS=Bigelowiella natans GN=RPS4 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.400e-20 Identity = 59/230 (25.65%), Postives = 109/230 (47.39%), Query Frame = 3 Query: 66 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETIHIQDALGHEFATRLGNVFTIGK 755 MA+G+KKH KR+++ K G F K SSGPH + + L+ I++ A +E ++ + V+ K +P MD +S P N+++R+L G+ ++ I E K+CKV + I T D R ++ I D++ + ++I +KF+VG ++T G+++ + +I K K + IH++ G + + ++ IG+ Sbjct: 1 MAKGIKKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVVKTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICKVIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGE 230
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_PYRAE (30S ribosomal protein S4e OS=Pyrobaculum aerophilum GN=rps4e PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.400e-20 Identity = 66/186 (35.48%), Postives = 91/186 (48.92%), Query Frame = 3 Query: 87 HLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGR---TIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNM 632 HL+R AP W + K GG + +PS GPH LPL LI+R+ LKYA T E I+ + +V VD VR D +P G MDV+ I T E +R++ D + L I EEA KL +V + G ++ +DGR T I D++ DL I I +G +V G N+ Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVIHGSNV 188
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_NANEQ (30S ribosomal protein S4e OS=Nanoarchaeum equitans GN=rps4e PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19 Identity = 71/226 (31.42%), Postives = 107/226 (47.35%), Query Frame = 3 Query: 78 LKKHLKRLNAPKHWMLD-KLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCK-VRSVQFGQKGIPYINTYDGRTIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSFETIHIQDALGHEFATRLGNVFTI 749 +K+HL+ L P+ W + K G + KPS GPH +P+ + LR+ L A REV +L VLVD + D +P G DV++IP+ NE +R+L D +G+ L I EEA K K +R V I Y T DGRT D + + ++ KI E I + + + G++ R+G+I K + I + G T L N+ + Sbjct: 5 IKRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYLLNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYGKIIRKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLEKDRKAYIIRGKHTGRIGVIKEVIKTDMPWPNIVRLEVAGEVGETWLDNIIPV 228
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_THEAC (30S ribosomal protein S4e OS=Thermoplasma acidophilum GN=rps4e PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 7.683e-19 Identity = 70/231 (30.30%), Postives = 104/231 (45.02%), Query Frame = 3 Query: 93 KRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKG-SFETIHIQDALGHEFATRLGNVFTIGKGTSHGFLFP 782 KRL + + + + P P+ G H + + L+ I+R+ LK + RE IL V VD K +K + GFMDV+ I E++R++Y+ +G L E A KL KVRS + T+DGRT D D + + KI+E IK G +T G ++ + G I E +G S +H Q+ F+T +VF IG L P Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFMDVIEI--NGESYRVVYNDQGALVLMKETKERASMKLLKVRSKVIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKIEAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSP 230
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_METS5 (30S ribosomal protein S4e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps4e PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.003e-18 Identity = 68/234 (29.06%), Postives = 108/234 (46.15%), Query Frame = 3 Query: 87 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDP-----LINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGS------FETIHIQDALGHEFATRLGNVFTIGK 755 H+ RL AP K + + S GPH + +PL L+LR+ L + + +E I+ VLVD +VR D YP G MDV++IP + R++ D + I +EE+KFKL ++ + + G+ N DGR + + T+K+ + +I F VM GG+N GII ++ + S + + I+ G E+ T L N IG+ Sbjct: 3 HITRLEAPWFLRASKKEYKWTVRASPGPHPLGKSIPLGLLLRDYLAFTSSLKESKKIISDGKVLVDGRVRRDYKYPVGLMDVIAIPHADLYLRIVPDRARLLKPVKISEEESKFKLVRLLNKTLVKGGLLQFNLEDGRNLLISKESTEMFKLPTLTTLKISIPNQEILGVYGFKENVYVMAVGGKN---AGIIGQLKRIQTSPYKTRRYSIVVIRSPDGSEYETNLENAMVIGE 233
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_METHJ (30S ribosomal protein S4e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps4e PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.712e-18 Identity = 64/228 (28.07%), Postives = 109/228 (47.81%), Query Frame = 3 Query: 87 HLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLINANDTIKLDL---ETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGSF--ETIHIQDALGHEFATRLGNVFTIGK 755 HLKR+ +PK W + + F K S GPH ++ LP+++ R+++ +E +L +R ++V+ + G D+VSIPK+ +++R+L D KGR I ++ A +L K+ + + G +N DG + D + D+I L L + N+I + F G M+ GG++ VG I GS I ++ G F T V +G+ Sbjct: 4 HLKRVVSPKSWGIPRKTDKFVTKTSPGPH-NKNALPIVVWARDQMGIVRNMKEAKHVLREREIIVNGRPVRHPDMGIGIFDIVSIPKSGKHYRILRDKKGRHVTIPIDEDAASSRLVKITNKTIVKGGRIQLNLRDGSNV-LTDKQYKSGDSIVLSLKEGQKNEIIDHFPFQPGNMAMIIGGKHSGVVGRIIEHIPVPGSLPNRVILKDESSGESFETIDEYVVMVGR 229
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_THEVO (30S ribosomal protein S4e OS=Thermoplasma volcanium GN=rps4e PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.980e-18 Identity = 66/221 (29.86%), Postives = 103/221 (46.61%), Query Frame = 3 Query: 93 KRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NRE-KXKGSFETIHIQDALGHEFATRLGNVFTIG 752 KRL P+ + + + P P G HK+ + L+ I+R+ L+ + RE IL V VD KV ++ + GFMDV+ I + E++R++Y+ +G L S + A K +V++ + +DGR + D I+ D + L KITE IK G +TGG ++ G I E K S +H + F T +VF IG Sbjct: 6 KRLMVPRTVKIPRKTYFWGPTPLPGRHKADHSVTLLTIIRDYLRLSDKEREATRILANGLVKVDGKVVKERKFGVGFMDVIEI--SGESYRVVYNNQGALVLVSESKDRANMKPLQVKNKVIAPGNKIQLGFHDGRVMVTEDRSISVGDVVIASLPDMKITEIIKMQPGNKAFITGGSHVGETGTISKIEIKESSSANLVHFDEG----FTTVKDHVFVIG 220
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_HALSA (30S ribosomal protein S4e OS=Halobacterium salinarium GN=rps4e PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.216e-17 Identity = 58/212 (27.36%), Postives = 96/212 (45.28%), Query Frame = 3 Query: 78 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGS-FETIHIQDALG 710 + H KRL+ PK W +++ F K +GPH +PL+++LR+ L+Y E + VLV+ D P G D+++ P +E +R+ D GR L I + A KL KV G +N +DG + + D++ +D +TN+I +++ G V G++ +G I GS T+ + D G Sbjct: 1 MTNHQKRLSVPKSWPVERKTETFTAKAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHDGSNLALDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALVTAVAGQHAGDIGEIAEINVQPGSASNTVRVDDENG 211
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_HALS3 (30S ribosomal protein S4e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rps4e PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.216e-17 Identity = 58/212 (27.36%), Postives = 96/212 (45.28%), Query Frame = 3 Query: 78 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGS-FETIHIQDALG 710 + H KRL+ PK W +++ F K +GPH +PL+++LR+ L+Y E + VLV+ D P G D+++ P +E +R+ D GR L I + A KL KV G +N +DG + + D++ +D +TN+I +++ G V G++ +G I GS T+ + D G Sbjct: 1 MTNHQKRLSVPKSWPVERKTETFTAKAGAGPH-GESGVPLVVVLRDVLEYVDDTSEAQYAINTDGVLVNGDSVGDVNRPIGMFDILAFPDRDEYYRVFPDEGGRLGLTEIDADAAGSKLNKVTDKTTVSGGRTQLNFHDGSNLALDEDAYAGGDSVVVDTDTNEIVAHFQYEEGALVTAVAGQHAGDIGEIAEINVQPGSASNTVRVDDENG 211
BLAST of EY664612 vs. ExPASy Swiss-Prot
Match: RS4E_NATPD (30S ribosomal protein S4e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps4e PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 7.191e-17 Identity = 55/201 (27.36%), Postives = 97/201 (48.26%), Query Frame = 3 Query: 78 LKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPD-PLINANDTIKLDLETNKITEXIKFDVGKCVMVTGGRNMRRVGII*NREKXKGS 677 + H KRL PK W +++ A+ K ++GPH E +PL+++LR+ L Y + +E L Q +L++ +D+ P G D+++ + E +R+ D GR L I ++ A KL K+ G ++ +DG T+ D + ND+I + + +I ++ G V G + R+G I + GS Sbjct: 1 MTNHQKRLAVPKSWPVERKEEAYTTKAAAGPH-GEEGVPLLIVLRDVLGYVDSKKEARYALEQDSILINGTAVSDERRPVGMFDILAFDEREEYYRIFPDEGGRLSLTPIDEDAAGSKLGKIVGKTQVAGGDTQLSLHDGETLLVEDATAYDTNDSIVVSNDGEEIVAHFTYEEGALVTAVSGAHAGRIGTIDEIQVTPGS 200 The following BLAST results are available for this feature:
BLAST of EY664612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >EY664612 ID=EY664612; Name=EY664612; organism=Citrus sinensis; type=EST; length=917bpback to top |