EY664609

Overview
NameEY664609
Unique NameEY664609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length910
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.747e-77
Identity = 141/233 (60.52%), Postives = 170/233 (72.96%), Query Frame = 1
Query:   10 RSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAV 708
            ++NLK VTLELGGKSP IIF DAD+D+A E AH  LFY+QGQCC AGSR +V E +YDEFV ++  RA +  +GDP   GV+Q PQID EQFQK+L  I SG +  A L+CGG   GN+GYF+QPTVFS+VTDDM IA++EIFGPVQ I+KFK  D+VI+RAN T +GLAA VFTK  D A T   AL+A TVW+NCY  F A  PFGG+ +SG  R  G Y L  Y +VK V
Sbjct:  268 KTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYDEFVRRSIERAKKYTLGDPLLPGVQQGPQIDKEQFQKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFKTIDEVIKRANNTTYGLAAAVFTKDIDKALTFASALQAGTVWVNCYSAFSAQCPFGGFKMSGNGRELGEYGLQEYTEVKTV 500          
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.357e-75
Identity = 135/233 (57.94%), Postives = 170/233 (72.96%), Query Frame = 1
Query:   10 RSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAV 708
            +SNLK VTLELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + ++G+P    V Q PQID EQ+ K+L  I SG +  A L+CGG   GN+GYF+QPTVFS+VTD+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AG+FTK  D A T+  AL+A TVW+NCY V  A +PFGG+ +SG  R  G Y L  Y +VK V
Sbjct:  255 KSNLKRVTLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLAPEVNQGPQIDKEQYNKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLSAGIFTKDLDKAVTVSSALQAGTVWVNCYSVVSAQVPFGGFKMSGNGRELGEYGLQQYTEVKTV 487          
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 5.727e-75
Identity = 134/233 (57.51%), Postives = 170/233 (72.96%), Query Frame = 1
Query:   10 RSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAV 708
            +SNLK V+LELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + ++G+P   GV Q PQID EQ++K+L  I SG +  A L+CGG   GN+GYF+QPTVFSDVTDDM IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AG+FT   D A T+  AL++ TVW+NCY V  A  PFGG+ +SG  R  G Y  + Y +VK V
Sbjct:  260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492          
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3)

HSP 1 Score: 281.182 bits (718), Expect = 5.727e-75
Identity = 134/233 (57.51%), Postives = 170/233 (72.96%), Query Frame = 1
Query:   10 RSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAV 708
            +SNLK V+LELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + ++G+P   GV Q PQID EQ++K+L  I SG +  A L+CGG   GN+GYF+QPTVFSDVTDDM IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AG+FT   D A T+  AL++ TVW+NCY V  A  PFGG+ +SG  R  G Y  + Y +VK V
Sbjct:  260 KSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492          
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 9.769e-75
Identity = 137/233 (58.80%), Postives = 169/233 (72.53%), Query Frame = 1
Query:   10 RSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAV 708
            +SNLK VTLELGGKSP I+  DAD+D AVE AH  +FY+QGQCC A SR +V E +YDEFV ++  RA + I+G+P   GV Q PQID EQ+ K+L  I SG +  A L+CGG   GN+GYFVQPTVFS+VTD+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL+AGVFTK  D A T+  AL+A TVW+NCY V  A  PFGG+ +SG  R  G Y  + Y +VK V
Sbjct:  260 KSNLKRVTLELGGKSPCIVLADADLDNAVEFAHHGVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKYILGNPLTPGVTQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGVFTKDIDKAITISSALQAGTVWVNCYGVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 492          
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 280.026 bits (715), Expect = 1.276e-74
Identity = 136/237 (57.38%), Postives = 170/237 (71.73%), Query Frame = 1
Query:   10 RSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAVXQPV 720
            +SNLK VTLELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E VYDEFV K+  RA + ++G+P   G+ Q PQID EQ  K+L  I SG +  A L+CGG R GN+G+FVQPTVFS+VTD+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GLAAGVFTK  D A T+  AL+A  VW+NCY +  A  PFGG+ +SG  R  G + L  Y ++K V   +
Sbjct:  260 KSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYVLGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMILSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496          
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.176e-74
Identity = 134/233 (57.51%), Postives = 170/233 (72.96%), Query Frame = 1
Query:   10 RSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAV 708
            +SNLK VTLELGGKSPFI+F DAD++ A+E+ H ALFY+QGQCC A SR +V E +YDEFV ++  RA + ++G+P   GV Q PQID EQ+ K+L  I SG +  A L+CGG   GN+GYF+QPTVFS+V+D+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GL AG FTK  D A T+  AL+A TVW+NCY V  A  PFGG+ +SG  R  G Y  + Y +VK V
Sbjct:  259 KSNLKRVTLELGGKSPFIVFADADLETALEVTHQALFYHQGQCCVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYDKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVSDEMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTTYGLFAGSFTKDLDKAITVSAALQAGTVWVNCYGVVSAQCPFGGFKMSGNGREMGEYGFHEYTEVKTV 491          
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 1.080e-73
Identity = 136/233 (58.37%), Postives = 167/233 (71.67%), Query Frame = 1
Query:   10 RSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAV 708
            RSNLK VTLELGGKSP IIF DAD+D AVE AH  +F+NQGQCC AGSR YV E +Y+EFV ++  RA RR+VG PF    EQ PQID +Q+ K+L  I SGI   A L+CGG  LG +G+F++PTVFS+VTDDM IA++EIFGPVQ IL+FK  D+VI RAN + FGL A VFT   + A T+  A++A TVWINCY+  +A  PFGG+ +SG  R  G   L  Y +VK V
Sbjct:  277 RSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIYVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQGPQIDKKQYNKILELIQSGITEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTVDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGFKMSGNGREMGESGLREYSEVKTV 509          
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 276.944 bits (707), Expect = 1.080e-73
Identity = 134/237 (56.54%), Postives = 171/237 (72.15%), Query Frame = 1
Query:   10 RSNLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAVXQPV 720
            +SNLK VTLELGGKSP I+F DAD+D AVE AH  +FY+QGQCC A SR +V E VYDEFV+++  RA + ++G+P   G+ Q PQID EQ  K+L  I SG +  A L+CGG R GN+G+FVQPTVFS+VTD+M IA++EIFGPVQ I+KFK  DDVI+RAN T +GLAAG+FTK  D A T+  AL+A  VW+NCY +  A  PFGG+ +SG  R  G + L  Y ++K V   +
Sbjct:  260 KSNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVKRSVERAKKYVLGNPLTPGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSVDDVIKRANNTTYGLAAGLFTKDLDKAITVSSALQAGVVWVNCYMMLSAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAMKI 496          
BLAST of EY664609 vs. ExPASy Swiss-Prot
Match: ALDH2_MACPR (Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=Macroscelides proboscideus PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.411e-73
Identity = 134/237 (56.54%), Postives = 169/237 (71.31%), Query Frame = 1
Query:   16 NLKPVTLELGGKSPFIIFDDADVDQAVELAHFALFYNQGQCCCAGSRTYVHERVYDEFVEKAKARAMRRIVGDPFKNGVEQSPQIDPEQFQKVLRYIMSGIESNATLDCGGDRLGNRGYFVQPTVFSDVTDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTAYTMMRALRAETVWINCYDVFDAAIPFGGYMLSGIXRGKGIYSLNAYLQVKAVXQPVXK 726
            NLK VTLELGGKSP I+F DAD+D AVE AH  LF++QGQCC A SR +V E +YDEFV ++  RA + ++G+P   GV Q PQID EQ+ K++  I SG +  A L+CGG   GN+GYF+QPTVFS+VTD+M IA++EIFGPVQ I+KFK  D+VI+RAN T +GLAAGVFTK  D A T+  AL+A TVW+NCY       PFGG+ +SG  R  G Y L+ Y +VK V   + K
Sbjct:    1 NLKRVTLELGGKSPCIVFADADLDNAVEFAHRGLFFHQGQCCVAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYDKIIDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSLDEVIKRANNTFYGLAAGVFTKDLDKAVTVSAALQAGTVWVNCYMANSVQCPFGGFKMSGNGRELGEYGLHEYTEVKTVTMKISK 237          
The following BLAST results are available for this feature:
BLAST of EY664609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL1A1_CHICK2.747e-7760.52Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A... [more]
AL1A1_RABIT3.357e-7557.94Retinal dehydrogenase 1 OS=Oryctolagus cuniculus G... [more]
AL1A1_SHEEP5.727e-7557.51Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 P... [more]
AL1A1_BOVIN5.727e-7557.51Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 P... [more]
AL1A1_HUMAN9.769e-7558.80Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
AL1A1_RAT1.276e-7457.38Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
AL1A1_HORSE2.176e-7457.51Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1... [more]
AL1A2_CHICK1.080e-7358.37Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A... [more]
AL1A1_MOUSE1.080e-7356.54Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
ALDH2_MACPR1.411e-7356.54Aldehyde dehydrogenase, cytosolic 2 (Fragment) OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664609 ID=EY664609; Name=EY664609; organism=Citrus sinensis; type=EST; length=910bp
CCACGCGTCCGAAGCAACCTTAAGCCAGTAACCTTAGAACTTGGAGGGAA
ATCACCATTTATAATATTCGATGATGCTGATGTTGACCAGGCTGTGGAAC
TTGCACACTTTGCTTTGTTCTATAATCAGGGACAATGTTGCTGTGCTGGA
TCTCGTACTTATGTACATGAGCGTGTATATGACGAGTTTGTAGAAAAAGC
AAAGGCACGTGCTATGAGGCGTATTGTTGGCGATCCCTTCAAGAATGGTG
TTGAACAAAGTCCTCAGATTGATCCAGAGCAATTTCAGAAGGTCCTTAGG
TACATAATGTCTGGAATTGAAAGCAATGCAACCCTTGACTGCGGAGGTGA
TAGATTGGGCAACAGAGGCTACTTTGTTCAGCCAACTGTCTTCTCAGATG
TTACGGATGACATGTTGATAGCACAGGATGAAATCTTTGGCCCGGTGCAA
TCCATCTTGAAGTTCAAGGAAACTGATGACGTTATAAGAAGAGCAAATAA
AACACGCTTTGGTCTAGCTGCTGGGGTTTTCACCAAGAGTGCAGACACTG
CATACACCATGATGCGTGCACTGAGAGCTGAGACTGTATGGATTAACTGC
TACGACGTGTTTGATGCTGCTATTCCTTTCGGTGGGTACATGCTGAGTGG
CATANGCCGGGGAAAAGGAATTTACAGCCTTAACGCTTACTTGCAAGTAA
AGGCCGTCGNTCAACCTGTGAANAAACCGGCNTGGCTTTATTTNGCTGCA
GTTCCCCCTCCCTTTGAATCTGGGGTTATGATAAGGACAGCGTGCTACTA
TCANCTTGTAATTATGGAGCAAATGGATAATTTACTGTAAAAGAAACTAC
TTTCTTTTGGGCTGTAAAAAAAAAAAAAAGGGCGGCCGTTTTAAAGATCC
AGCTTACCTA
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