CX672017

Overview
NameCX672017
Unique NameCX672017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:317..1135. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 5.573e-63
Identity = 118/209 (56.46%), Postives = 162/209 (77.51%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ +G  RK++I KD+TTI+AD  + +E++ RIAQ++K+L E+DS YD EKL ERIAKL+GGVAVIKVGAATETEL+DRKLRIEDA NAT AA+EEGIVPGGG  L+HLS  V  +K  L + +E++GADIV++AL AP + IA+N+           + ++++ GYN +T +YE+++ AG++DPA V R ALQNA S+AGMVLTT+A+
Sbjct:  312 LDMMGIGRKISINKDNTTIVADGGTAEEVKKRIAQIRKQLGESDSDYDKEKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLIHLSTKVEELKGSLNNEEEKIGADIVRRALEAPLNQIANNSGVEGSVIVEKVRSTDFSVGYNVITGEYEDLIAAGILDPAMVVRSALQNAGSIAGMVLTTEAV 520          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH602_SYNJB (60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.161e-62
Identity = 123/209 (58.85%), Postives = 157/209 (75.12%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ +G ARK+T+ KD TTI+ D ++K  ++ R+AQ++K+L  TDS YD EKL ERIAKL+GGVAVIKVGAATETEL+DRKLRIEDA NAT AA+EEGIVPGGGA L+HLS  +PA K KL +A+E++GA+IV +AL AP   IAHNA            + E   G++A+T  Y +M   G++DPAKV R ALQNAAS+AGM LTT+AI
Sbjct:  313 LDMMGVARKITVTKDKTTIVTDGSTKAAVEKRVAQIRKQLETTDSEYDREKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATRAAVEEGIVPGGGATLLHLSKGIPAFKAKL-NAEEQVGAEIVYRALQAPLFQIAHNAGLEGSVVVEKVLEKEMPFGFDALTGTYVDMFAQGIVDPAKVVRSALQNAASIAGMYLTTEAI 520          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 6.812e-61
Identity = 122/209 (58.37%), Postives = 155/209 (74.16%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ +G ARK+T+ KD TTI+ D ++K  ++ R+AQ++K+L  TDS YD EKL ERIAKL+GGVAVIKVGAATETEL+DRKLRIEDA NAT AA+EEGIVPGGGA L+HLS  +PA K  L +A+E++GADIV +AL AP   IAHNA            + E   G++A+T  Y +M   G++DPAKV R ALQNAAS+A M LTT+AI
Sbjct:  313 LDMMGVARKITVTKDKTTIVTDGSTKAAVEKRVAQIRKQLETTDSEYDREKLQERIAKLAGGVAVIKVGAATETELKDRKLRIEDALNATRAAVEEGIVPGGGATLLHLSKGIPAFKANL-NAEEQVGADIVCRALQAPLYQIAHNAGLEGSVVVEKVLEKEMPFGFDALTGTYVDMFAQGIVDPAKVVRSALQNAASIAAMYLTTEAI 520          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.088e-58
Identity = 123/208 (59.13%), Postives = 157/208 (75.48%), Query Frame = -2
Query:  193 EQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            +QLG ARK+TI KD+TTI+A+  ++  ++AR AQ+K+++ ETDS YD EKL ER+AKLSGGVAVIKVGAATETEL+DRKLRIEDA NAT AAI EGIVPGGG AL+HL+  +    D L   +E++GA I+QKAL  P   IA NA           ++ E+  G+NAMT++YE+++ AG+IDP KVTR ALQNAAS+A MVLTT+ I
Sbjct:  314 DQLGKARKMTITKDNTTIVAEG-NEAAVKARCAQIKQQIEETDSEYDREKLQERLAKLSGGVAVIKVGAATETELKDRKLRIEDAVNATKAAIAEGIVPGGGTALLHLAAGMGGFIDSL-SGEEKIGARIIQKALEGPLRQIAENAGLEGSVIAEKVRNLEFNFGFNAMTNEYEDLVAAGIIDPVKVTRSALQNAASIAAMVLTTECI 519          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.133e-58
Identity = 120/209 (57.42%), Postives = 153/209 (73.21%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ LG ARKVTI KD TTI+A   +K  ++ RIAQ+ K++ +TDS +D EKL ER+AKL+GGVAVIKVGAATETEL+DRKLRIEDA NAT AA+EEGIVPGGG  L+HL+  + AIK  L D DE+ GAD++ +AL AP   IA NA           ++ ++  GY+AM  ++ +ML AGV DPAKV R ALQNAAS+A MVLTT+ +
Sbjct:  313 IDMLGKARKVTITKDKTTIVAGTDNKAAVEKRIAQIHKQMEDTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKDRKLRIEDALNATKAAVEEGIVPGGGTTLLHLTKKIDAIKAGLAD-DEKTGADLIARALEAPLRQIADNAGVEGSVIAQKVRELDFNIGYDAMKGEFVDMLAAGVADPAKVVRSALQNAASIAAMVLTTEVL 520          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH602_ANASL (60 kDa chaperonin 2 OS=Anabaena sp. (strain L31) GN=groL2 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.133e-58
Identity = 120/209 (57.42%), Postives = 155/209 (74.16%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ L TAR +TI K++TTI+A   +K EIQ RI Q++K+L ETDS YD EKL ERIAKL+GG+AVIKVGA  ETEL+DRKLRIE+A NAT AA+ E I PGGG  L++L+  V  IK   E+ +E++GADIV++AL AP   IA NA           KDS++  GYNA T ++E+++ AG+IDPAKV R ALQNAAS+AG+VLTT+AI
Sbjct:  312 IDALCTARTITIDKENTTIVAGTTTKPEIQKRIGQIRKQLEETDSEYDKEKLQERIAKLAGGIAVIKVGAVPETELKDRKLRIENALNATKAAVAESIGPGGGKTLIYLASKVDPIKAYFEE-EEKIGADIVKRALEAPLRQIADNAGEEGSVIVSRVKDSDFNVGYNAATGEFEDLIAAGIIDPAKVVRSALQNAASIAGLVLTTEAI 519          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH602_SYNP6 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL2 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.570e-57
Identity = 115/206 (55.83%), Postives = 154/206 (74.76%), Query Frame = -2
Query:  193 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 810
            LG A+K+TI KD+T I+A   +K ++ ARIAQ+++ L ETDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AAIEEG+VPGGG  L+HL+  + +++  L  ADE+LG +IV +AL AP   IA NA           +D ++  GYNA+T +YE+++ +G++DPAKV R ALQ+AASVA ++LTT+ +
Sbjct:  316 LGKAQKITISKDTTIIVAGDENKADVAARIAQIRRSLEETDSDYDREKLQERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGVVPGGGTTLLHLASALTSLQASLTVADEKLGVEIVARALEAPLRQIADNAGAEGSVVVEKLRDKDFNFGYNALTGQYEDLVASGILDPAKVVRSALQDAASVASLILTTEVL 521          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH601_SYNJB (60 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.794e-57
Identity = 117/209 (55.98%), Postives = 151/209 (72.25%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++  GTAR+VT+ KD+TTI+A+  ++  ++AR  Q+++++ ETDS YD EKL ER+AKLSGGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG  L HL   V          DE +GA++V +AL AP   IA NA           KD  + TGY+A  D + +M +AG++DPAKVTR ALQNAAS+AGMVLTT+AI
Sbjct:  313 LDSFGTARRVTVTKDNTTIVAEG-NEAAVKARCEQIRRQIEETDSTYDKEKLQERLAKLSGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLIPVVTEWAQANLSGDELVGANLVARALGAPLRRIAENAGQNGSIVLERVKDKPFNTGYDAQNDAFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTEAI 520          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_THEEB (60 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groL PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.962e-56
Identity = 116/209 (55.50%), Postives = 151/209 (72.25%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ LG AR++TI KD TTI+A+   K  ++AR  Q+++++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG  LVHL+  +     +    +E +GA+IV++AL AP   IA NA           K+  +  GY+A  D+Y NM  AG++DPAKVTR ALQNAAS+AGMVLTT+ I
Sbjct:  313 LDMLGKARRITITKDHTTIVAEGNEK-AVKARCEQIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLVHLAPELSNWAAEHLTGEELIGANIVERALSAPLRRIAENAGQNGAIIVERVKEKPFDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECI 520          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH602_THEVL (60 kDa chaperonin 2 OS=Thermosynechococcus vulcanus GN=groL2 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.962e-56
Identity = 116/206 (56.31%), Postives = 148/206 (71.84%), Query Frame = -2
Query:  193 LGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 810
            LG A  VT+ KD+T ++++  +K +IQ R+ QLK++LAETDS YD EKL ERIAKL GGVAVIKVGAATETEL+DRKLR+EDA NAT AA+ EGIVPGGG  L+HL+  + A+   L   +E+ GA IV  AL AP + IA NA           +  ++  G+NA T  YE+++ AG+IDPAKV R ALQNA S+AGMVLTT+A+
Sbjct:  315 LGEASSVTVTKDTTILVSEKGNKADIQKRVEQLKQQLAETDSEYDKEKLQERIAKLVGGVAVIKVGAATETELKDRKLRLEDALNATKAAVAEGIVPGGGVTLLHLASRIDALLPSL-SPEEQTGARIVASALAAPVAQIADNAGAEGAVVVENVRAGDFNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEAL 519          
The following BLAST results are available for this feature:
BLAST of CX672017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_TRIEI5.573e-6356.4660 kDa chaperonin 1 OS=Trichodesmium erythraeum (s... [more]
CH602_SYNJB6.161e-6258.8560 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 ... [more]
CH601_SYNJA6.812e-6158.3760 kDa chaperonin 1 OS=Synechococcus sp. (strain J... [more]
CH601_GLOVI1.088e-5859.1360 kDa chaperonin 1 OS=Gloeobacter violaceus GN=gr... [more]
CH602_GLOVI4.133e-5857.4260 kDa chaperonin 2 OS=Gloeobacter violaceus GN=gr... [more]
CH602_ANASL4.133e-5857.4260 kDa chaperonin 2 OS=Anabaena sp. (strain L31) G... [more]
CH602_SYNP61.570e-5755.8360 kDa chaperonin 2 OS=Synechococcus sp. (strain A... [more]
CH601_SYNJB7.794e-5755.9860 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 ... [more]
CH60_THEEB2.962e-5655.5060 kDa chaperonin OS=Thermosynechococcus elongatus... [more]
CH602_THEVL2.962e-5656.3160 kDa chaperonin 2 OS=Thermosynechococcus vulcanu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14E02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E02-I4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672017 ID=CX672017; Name=CX672017; organism=Citrus sinensis; type=EST; length=820bp
TTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTAAAA
CTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAAAAC
TCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTGTGG
CGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAGCCT
GAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCACAT
CTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTCATA
CTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCACCT
TCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGTGAT
GCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTCATC
TGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGATGAA
CCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCAAAA
GTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTCAGT
TTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATTTAG
CAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCAGCC
AACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGATGC
AGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTCTAG
CTGTACCTAGCTGCTCAACT
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