CX672017

Overview
NameCX672017
Unique NameCX672017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACC4 (60 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groL PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.346e-51
Identity = 110/209 (52.63%), Postives = 147/209 (70.33%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA           K  +   G+NA T ++ NML++G++DPAKVTR ALQNAASVA M LTT+A+
Sbjct:  312 VESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH602_MYCA1 (60 kDa chaperonin 2 OS=Mycobacterium avium (strain 104) GN=groL2 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.346e-51
Identity = 110/209 (52.63%), Postives = 140/209 (66.99%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            +  LG ARKV + KD TTI+  A   D I  R+AQ++ E+  +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+H    +PA+ +   + DE  GA+IV+ AL AP   IA N            ++S   TG NA T +YE++L+AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  312 ISLLGKARKVVVTKDETTIVEGAGDSDAIAGRVAQIRTEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLHA---IPALDELKLEGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSPAGTGLNAATGEYEDLLKAGVADPVKVTRSALQNAASIAGLFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: RUBC_CHLRE (RuBisCO large subunit-binding protein subunit beta-2 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 102/210 (48.57%), Postives = 147/210 (70.00%), Query Frame = -2
Query:  193 EQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDS--EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            E LG A KV+I K++TTI+ D  ++ +++ R+ Q++   AET+  Y+ EKL ERIA+LSGGVA+I+VGA TETEL+++KLR+EDA NAT AA+EEGIV GGG  L+ LS  V +IK+ L + ++++GADI+++AL  P  LIA+NA            D+  +   GYNA TD +E++++AG+IDP KV RC+L+NA SVA   L    +
Sbjct:   30 EVLGLAAKVSISKEATTIVGDGRTQQQVEGRVKQIRNLAAETEQEYEKEKLNERIARLSGGVAIIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVIGGGCTLLRLSQKVDSIKETLSNEEQKMGADIIKRALSYPIKLIANNAGTNGSVVMQRVMDNIDQPYYGYNAATDTFEDLMEAGIIDPTKVVRCSLENAVSVAKTFLLADVV 239          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_STAHJ (60 kDa chaperonin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 108/209 (51.67%), Postives = 147/209 (70.33%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ LG+A KV + KD+TT++      + I AR++Q+K ++ ETDS +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V  I+    + D   G +IV KAL AP   IA NA           K ++   G+NA T+++ NML+ G++DP KVTR ALQ+AASVA M LTT+A+
Sbjct:  312 IDMLGSANKVEVTKDNTTVVDGDGDDNSIDARVSQIKAQIEETDSDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYNKVDEIE---AEGDVATGVNIVLKALSAPVRQIAENAGLEGSVIVERLKHADAGVGFNAATNEWVNMLEEGIVDPTKVTRSALQHAASVAAMFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_PORPU (60 kDa chaperonin, chloroplastic OS=Porphyra purpurea GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 112/209 (53.59%), Postives = 144/209 (68.90%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ LG AR+V + KDSTTIIAD   +  +++R  Q+K+++  +DS+Y+ EKL ER+AKLSGGVAVIKVGAATETE++D+KLR+EDA NAT AAIEEGIVPGGG+  VH+S  +          DE +GA IVQ+AL  P   IA NA           K +++  GY+A   K  NM  AG+IDPAKV R ALQNA S+A MVLTT+ I
Sbjct:  314 LDMLGKARRVVVTKDSTTIIADG-HEATVKSRCEQIKRQIETSDSLYEREKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAINATKAAIEEGIVPGGGSTNVHISGELFVWAKNNLFEDELIGALIVQRALTYPLRRIAFNAGDNGAVVVEKVKTNDFCIGYDASNGKIVNMYDAGIIDPAKVARSALQNATSIAAMVLTTECI 521          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_HALOH (60 kDa chaperonin OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 107/209 (51.20%), Postives = 143/209 (68.42%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            +  LG A KVT+ K+ TTI+  A    EIQ RI Q++ ++  TDS +D EKL ER+AKL+GGVAVIKVGAATETEL+++K RIEDA +AT AA+EEG+V GGG  L+   D +PA+ +   + DE  G DIV+KAL AP  LIA NA           K  +   G++A   ++ NM+++G++DPAKVTR ALQNAAS A M+LTT+ +
Sbjct:  313 ISMLGRAHKVTVTKEDTTIVEGAGDSKEIQNRIKQIRTQIENTDSDFDREKLQERLAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGLVAGGGTTLI---DAIPALDELNLEGDEATGVDIVRKALEAPVRLIADNAGYEGSVIVEKVKSEDKGIGFDAYNGEFVNMIESGIVDPAKVTRSALQNAASAAAMLLTTECL 518          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACHK (60 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 110/209 (52.63%), Postives = 146/209 (69.86%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA           K  +   G+NA T ++ NML+ G++DPAKVTR ALQNAASVA M LTT+A+
Sbjct:  312 VESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACCZ (60 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 110/209 (52.63%), Postives = 146/209 (69.86%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA           K  +   G+NA T ++ NML+ G++DPAKVTR ALQNAASVA M LTT+A+
Sbjct:  312 VESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACCQ (60 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 110/209 (52.63%), Postives = 146/209 (69.86%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA           K  +   G+NA T ++ NML+ G++DPAKVTR ALQNAASVA M LTT+A+
Sbjct:  312 VESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACC7 (60 kDa chaperonin OS=Bacillus cereus (strain AH187) GN=groL PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.090e-50
Identity = 110/209 (52.63%), Postives = 146/209 (69.86%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA           K  +   G+NA T ++ NML+ G++DPAKVTR ALQNAASVA M LTT+A+
Sbjct:  312 VESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAV 517          
The following BLAST results are available for this feature:
BLAST of CX672017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BACC48.346e-5152.6360 kDa chaperonin OS=Bacillus cereus (strain B4264... [more]
CH602_MYCA18.346e-5152.6360 kDa chaperonin 2 OS=Mycobacterium avium (strain... [more]
RUBC_CHLRE1.090e-5048.57RuBisCO large subunit-binding protein subunit beta... [more]
CH60_STAHJ1.090e-5051.6760 kDa chaperonin OS=Staphylococcus haemolyticus (... [more]
CH60_PORPU1.090e-5053.5960 kDa chaperonin, chloroplastic OS=Porphyra purpu... [more]
CH60_HALOH1.090e-5051.2060 kDa chaperonin OS=Halothermothrix orenii (strai... [more]
CH60_BACHK1.090e-5052.6360 kDa chaperonin OS=Bacillus thuringiensis subsp.... [more]
CH60_BACCZ1.090e-5052.6360 kDa chaperonin OS=Bacillus cereus (strain ZK / ... [more]
CH60_BACCQ1.090e-5052.6360 kDa chaperonin OS=Bacillus cereus (strain Q1) G... [more]
CH60_BACC71.090e-5052.6360 kDa chaperonin OS=Bacillus cereus (strain AH187... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14E02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E02-I4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672017 ID=CX672017; Name=CX672017; organism=Citrus sinensis; type=EST; length=820bp
TTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTAAAA
CTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAAAAC
TCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTGTGG
CGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAGCCT
GAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCACAT
CTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTCATA
CTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCACCT
TCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGTGAT
GCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTCATC
TGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGATGAA
CCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCAAAA
GTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTCAGT
TTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATTTAG
CAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCAGCC
AACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGATGC
AGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTCTAG
CTGTACCTAGCTGCTCAACT
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