CX672017

Overview
NameCX672017
Unique NameCX672017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.859e-50
Identity = 107/211 (50.71%), Postives = 148/211 (70.14%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED--ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ LG A KV + KD+TT++  A +++ I+AR+  ++ ++ ET S +D EKL ER+AKL+GGVAV+KVGAATETEL++RKLRIEDA NAT AA+EEGIV GGG +L+++   +PA++  L +  ADE  G  +V +AL AP   IA NA           K+     GYNA T +Y +M+  G++DPAKVTR ALQNAASV+ M LTT+A+
Sbjct:  312 LDMLGRASKVVVTKDTTTVVEGAGNEETIKARVQTIRNQIEETTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTSLINV---IPAVRALLSEVTADEATGVKLVLRALEAPVRQIAENAGEEGSVIVEKLKNESVGVGYNAATGEYVDMIAHGIVDPAKVTRSALQNAASVSAMFLTTEAV 519          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACCN (60 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groL PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.859e-50
Identity = 110/209 (52.63%), Postives = 146/209 (69.86%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            +E LG A KV + K++TTI+    S ++I+ARI Q++ +L ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I     + DE  G +IV +AL  P   IA NA           K  +   G+NA T ++ NML++G++DPAKVTR ALQNAASVA M LTT+A+
Sbjct:  312 IESLGRAGKVVVTKENTTIVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYAKVASI---AAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_GUITH (60 kDa chaperonin, chloroplastic OS=Guillardia theta GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 108/212 (50.94%), Postives = 150/212 (70.75%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED---ADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ LG AR++TI K++TTIIA+   KD +++R  Q+++++  +DS Y+ EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG+ L HL++    +KD  ED    DE +GA IV+++L +P   I  N            K+SE+  GY+A   +  +M   G+IDPAKVTR  LQNAAS+A M+LTT+ I
Sbjct:  314 LDMLGQARRITITKENTTIIAEGNEKD-VKSRCEQIRRQIEASDSSYEREKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGSTLTHLAND---LKDWAEDNLIEDELIGALIVERSLTSPLRRIIENTGQNSAIIIEQIKESEFNIGYDAAKGEIVDMYDVGIIDPAKVTRSGLQNAASIASMILTTECI 521          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BIFAS (60 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) GN=groL PE=3 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 109/205 (53.17%), Postives = 139/205 (67.80%), Query Frame = -2
Query:  193 GTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 807
            GTA+KV + KD TTI++   SK+++ AR+AQ++ E+ +TDS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA     AAIEEG+VPGGG ALV  ++ V   KD   + DE  GA IV   + AP   IA NA           +      G+NA TD YE+++ AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  316 GTAKKVIVSKDETTIVSGGGSKEDVAARVAQIRAEIEKTDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLVPGGGVALVQAAEKVE--KDFNLEGDEATGAAIVFSGIEAPIKQIAENAGLSGAVVIDKVRSLPEGEGFNAATDTYEDLMAAGVTDPVKVTRSALQNAASIAGLFLTTEAV 518          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BIFA0 (60 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 109/205 (53.17%), Postives = 139/205 (67.80%), Query Frame = -2
Query:  193 GTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 807
            GTA+KV + KD TTI++   SK+++ AR+AQ++ E+ +TDS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA     AAIEEG+VPGGG ALV  ++ V   KD   + DE  GA IV   + AP   IA NA           +      G+NA TD YE+++ AGV DP KVTR ALQNAAS+AG+ LTT+A+
Sbjct:  316 GTAKKVIVSKDETTIVSGGGSKEDVAARVAQIRAEIEKTDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLVPGGGVALVQAAEKVE--KDFNLEGDEATGAAIVFSGIEAPIKQIAENAGLSGAVVIDKVRSLPEGEGFNAATDTYEDLMAAGVTDPVKVTRSALQNAASIAGLFLTTEAV 518          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACV8 (60 kDa chaperonin OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 106/209 (50.72%), Postives = 143/209 (68.42%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            +E LGT  KVT+ KD+TTI+  A +K+ IQ RI Q+K E+  T S YD EKL ER+AKLSGGVAV+ VGAA+E E++++K R++DA  AT AAIEEGIVPGGG A +  S+ +  +K   ++ DE  G +I+++A+  P   I  NA           ++ +   GYNA TD YEN+  AGV+DPAKVTR AL+NAAS+AGM LTT+ +
Sbjct:  314 LEMLGTCDKVTVSKDNTTIVNGAGAKENIQERINQIKAEIKNTTSDYDKEKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALCATRAAIEEGIVPGGGVAYIRASEALEGLKG--DNEDETTGIEIIKRAIEEPLRQIVANAGKEGAVVVQKVREGKGDFGYNARTDVYENLHAAGVVDPAKVTRVALENAASIAGMFLTTECV 520          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACAN (60 kDa chaperonin OS=Bacillus anthracis GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 110/209 (52.63%), Postives = 145/209 (69.38%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA           K  +   G+NA T ++ NML+ G++DPAKVTR ALQNAASVA M LTT+A+
Sbjct:  312 VESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLVGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACAC (60 kDa chaperonin OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 110/209 (52.63%), Postives = 145/209 (69.38%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA           K  +   G+NA T ++ NML+ G++DPAKVTR ALQNAASVA M LTT+A+
Sbjct:  312 VESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLVGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_BACAA (60 kDa chaperonin OS=Bacillus anthracis (strain A0248) GN=groL PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.428e-50
Identity = 110/209 (52.63%), Postives = 145/209 (69.38%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG +L+++   V +I   + + DE  G +IV +AL  P   IA NA           K  +   G+NA T ++ NML+ G++DPAKVTR ALQNAASVA M LTT+A+
Sbjct:  312 VESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLVGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAV 517          
BLAST of CX672017 vs. ExPASy Swiss-Prot
Match: CH60_DESRM (60 kDa chaperonin OS=Desulfotomaculum reducens (strain MI-1) GN=groL PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.172e-50
Identity = 104/209 (49.76%), Postives = 152/209 (72.73%), Query Frame = -2
Query:  193 VEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 819
            ++ LGTAR++ ++K+ T I+  A  + +I+ RIAQ+KK++ ET S +D EKL ER+AKL+GGVAVI+VGAATE E++++KLRI+DA NAT AA+EEGIVPGGG+A V++   + +++    + D + G DIV++AL  P   IA+NA           + +    G+NAM+++Y +M+ AG+IDPAKVTR ALQNAAS+A MVLTT+ +
Sbjct:  313 LDMLGTARQIRVKKEETIIVGGAGEQAQIEGRIAQIKKQIEETTSDFDREKLQERLAKLAGGVAVIQVGAATEVEMKEKKLRIDDALNATRAAVEEGIVPGGGSAFVNIITTLDSVQ---LEGDAKTGVDIVKRALEEPLRQIANNAGLEGSVVVEKVRTT--GKGFNAMSEEYVDMIAAGIIDPAKVTRSALQNAASIAAMVLTTETL 516          
The following BLAST results are available for this feature:
BLAST of CX672017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_EXISA1.859e-5050.7160 kDa chaperonin OS=Exiguobacterium sp. (strain A... [more]
CH60_BACCN1.859e-5052.6360 kDa chaperonin OS=Bacillus cereus subsp. cytoto... [more]
CH60_GUITH2.428e-5050.9460 kDa chaperonin, chloroplastic OS=Guillardia the... [more]
CH60_BIFAS2.428e-5053.1760 kDa chaperonin OS=Bifidobacterium animalis subs... [more]
CH60_BIFA02.428e-5053.1760 kDa chaperonin OS=Bifidobacterium animalis subs... [more]
CH60_BACV82.428e-5050.7260 kDa chaperonin OS=Bacteroides vulgatus (strain ... [more]
CH60_BACAN2.428e-5052.6360 kDa chaperonin OS=Bacillus anthracis GN=groL PE... [more]
CH60_BACAC2.428e-5052.6360 kDa chaperonin OS=Bacillus anthracis (strain CD... [more]
CH60_BACAA2.428e-5052.6360 kDa chaperonin OS=Bacillus anthracis (strain A0... [more]
CH60_DESRM3.172e-5049.7660 kDa chaperonin OS=Desulfotomaculum reducens (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_14E02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E02-I4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672017 ID=CX672017; Name=CX672017; organism=Citrus sinensis; type=EST; length=820bp
TTTTTTTTTTTTTTACAAAAAAGACACGATTTTATATCAATTAAGTAAAA
CTTGTCTTTTTCAGTTCACCGCAATAAAACCACTCTTTCATCTATAAAAC
TCCTAACTAAATCTGGAGAGTCCTAGAGATTACACCATAAGACCTTGTGG
CGGAGCGGCTACCGGAGTTTTGGGCTTTGGCTTCTCCACGACAATAGCCT
GAGTGGTCAGGACCATTCCTGCAACTGAAGCCGCATTCTGCAATGCACAT
CTTGTCACCTTTGCAGGATCAATAACTCCAGCCTGAAGCATGTTCTCATA
CTTGTCTGTCATTGCATTGTAACCAGTCGTCCATTCACTATCTTTCACCT
TCTCCACAACAACCTCACCTTCAACTCCAGCATTGTGAGCTATCAGTGAT
GCAGGTGCTACCAGTGCCTTCTGCACAATGTCAGCACCTAATCGCTCATC
TGCATCTTCAAGCTTGTCCTTGATAGCAGGAACATGATCAGACAGATGAA
CCAGAGCAGCACCACCACCAGGAACAATACCTTCCTCTATGGCTGCAAAA
GTTGCATTCTTGGCATCTTCAATACGGAGTTTACGGTCCTCAAGCTCAGT
TTCTGTGGCAGCTCCAACTTTAATAACAGCAACCCCGCCAGACAATTTAG
CAATTCTCTCAGCAAGTTTCTCTGAGTCATAAACAGAATCCGTCTCAGCC
AACTCCTTTTTCAGCTGTGCAATTCTAGCTTGTATTTCATCCTTTGATGC
AGCATCAGCAATAATGGTAGTGGAGTCCTTTCTGATGGTCACCTTTCTAG
CTGTACCTAGCTGCTCAACT
back to top