CX672016

Overview
NameCX672016
Unique NameCX672016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH602_ANAVT (60 kDa chaperonin 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL2 PE=3 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 1.029e-68
Identity = 130/235 (55.32%), Postives = 179/235 (76.17%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            AK I+FD+ SR A++ G++ L+DAV +TLGP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVA+KT D AGDGTTTA+VL + +IK GL +V +G+NPVSLKRGIDKT   LV E+ K A+P+EG   I  VAT+SAGND+ +G MIA A++KV  DGV+                GM+IDRGYISP F+TN E+  VE EN R+L+TD+KIS+I++++P+L
Sbjct:    2 AKIISFDEESRRALERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVAAKTKDVAGDGTTTATVLVQALIKEGLKNVAAGSNPVSLKRGIDKTTEALVAEIAKVAKPVEG-SAIAQVATVSAGNDEEVGAMIAQAVEKVTKDGVITVEESKSLTTELDVVEGMQIDRGYISPYFITNNERQTVELENVRILITDKKISSIQELVPVL 235          
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH602_ANASP (60 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 7120) GN=groL2 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.995e-68
Identity = 129/235 (54.89%), Postives = 178/235 (75.74%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            AK I+FD+ SR A++ G++ L+DAV +TLGP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVASKT D AGDGTTTA+VL + +I+ GL +V +G NPVSLKRGIDKT   LV E+ K A+P+EG   I  VAT+S+GND+ +G MIA A++KV  DGV+                GM+IDRGYISP F+TN E+  VE EN R+L+TD+KIS+I++++P+L
Sbjct:    2 AKIISFDEESRRALERGVNALADAVKITLGPKGRNVLLEKKYGTPQIVNDGITVAKEIELEDPLENTGARLIQEVASKTKDVAGDGTTTATVLVQALIREGLKNVAAGTNPVSLKRGIDKTTEALVAEIAKVAKPVEG-SAIAQVATVSSGNDEEVGAMIAQAVEKVTKDGVITVEESKSLTTELEVVEGMQIDRGYISPYFITNNERQTVELENVRILITDKKISSIQELVPVL 235          
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.995e-68
Identity = 126/235 (53.62%), Postives = 182/235 (77.45%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            AK I F + +R A++ GI++L+DAV +T+GP+GRNV+L++ FG+P++VNDGVTIA+ IELADP+EN GA L+REVA+KTND AGDGTTTA++LA+ +++ GL ++++GANPV+L+RGI+KT   LVE++  +A+P+EGR +I  VATISAGND  +G MIA A+D VG DGV+                GM+ DRGYISP FVT+ E+++ E+ENA +L+T  K+S ++D++P+L
Sbjct:    2 AKQILFREEARKALEQGINQLADAVKVTIGPKGRNVLLEKKFGAPQIVNDGVTIAKEIELADPLENTGAQLMREVATKTNDVAGDGTTTATILAQSMVQEGLKNISAGANPVALRRGIEKTTAYLVEQIAAQAKPVEGRKNIAEVATISAGNDPEVGEMIARAMDAVGRDGVITVEESKSLETQLEVVEGMQFDRGYISPYFVTDTERMVAEYENAYLLITSNKLSNLQDLVPVL 236          
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH601_TRIEI (60 kDa chaperonin 1 OS=Trichodesmium erythraeum (strain IMS101) GN=groL1 PE=3 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.911e-68
Identity = 128/235 (54.47%), Postives = 185/235 (78.72%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            AK + FD +SR +++ GI+ L+DAV +T+GP+GRNV+L++ +G+P++VNDG+T+A+ IEL DP+EN GA LI+EVASKT D AGDGTTTA+VLA+ +IK GL +V +GANPV+++RGI+KTV  LV+E++  A+P+EG + I  VAT+SAG D  +G MI++A+DKV  DGV+                GM+IDRGY+SP FVT+ E+L+V+FENAR+L+TD+KIS+I+D++P+L
Sbjct:    2 AKIVEFDDKSRRSLERGINTLADAVRITMGPKGRNVLLEKKYGAPQIVNDGITVAKDIELEDPLENTGAKLIQEVASKTKDIAGDGTTTATVLAQSMIKEGLKNVAAGANPVAVRRGIEKTVSLLVKEIQTVAKPVEG-EAIAQVATVSAGGDAEVGRMISEAMDKVTKDGVITVEESKSLSTDLEVVEGMQIDRGYLSPYFVTDQERLVVDFENARILITDKKISSIQDLVPVL 235          
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 6.672e-68
Identity = 130/235 (55.32%), Postives = 179/235 (76.17%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            AK I FD+ +R A++ G++ L+DAV +TLGP+GRNVVL++ FG+P++VNDGVTIA+ IEL DP+EN GA LIREVASKTND AGDGTTTA+VLA+ +I+ GL +V +GANP+SLKRG++KTV  LV+E+   A+P+E    I  VATIS+GND+ IG MIA+A+DKVG +GV+                GM+ D+GY+SP FVT+ E++I + +   +L+TD+KIS I+D+IP+L
Sbjct:    2 AKMIVFDETARRALERGVNALADAVRVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDPLENTGAQLIREVASKTNDVAGDGTTTATVLAQALIREGLRNVAAGANPMSLKRGMEKTVAKLVQEIAAMAKPVEDNKTIAEVATISSGNDEEIGQMIAEAMDKVGKEGVITVEESKSLVTELDVVEGMQFDKGYVSPYFVTDTERMITDLDEPFILLTDKKISIIQDLIPVL 236          
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH60_DESAP (60 kDa chaperonin OS=Desulforudis audaxviator (strain MP104C) GN=groL PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.781e-66
Identity = 128/236 (54.24%), Postives = 175/236 (74.15%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            +AKDI + + +R AM+ G++ L+DAV +TLGP+GRNVVL++ FGSP +VNDGVTIAR IEL +P EN GA L++EVA+KTND AGDGTTTA+VLA+ I++ GL +VT+GANP+ LKRGI+K V   VEE++ RA+P+E ++ I  VA+ISA ND  IG +IADA++KVG DGV+                GM  DRGYISP  +T+P+K+     +  +L+TD+KISA+ DI+P+L
Sbjct:    2 AAKDIVYREDARTAMERGVNALADAVRVTLGPKGRNVVLEKKFGSPMIVNDGVTIAREIELENPFENMGAQLVKEVATKTNDIAGDGTTTAAVLAQAIVRAGLKNVTAGANPMILKRGIEKAVERTVEEIKSRAKPVESKEAITQVASISA-NDTTIGNLIADAMEKVGKDGVITVEESKGMGTSLEVVDGMNFDRGYISPYMITDPDKMEATLADPYILITDKKISAVADILPIL 236          
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH60_ARCB4 (60 kDa chaperonin OS=Arcobacter butzleri (strain RM4018) GN=groL PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.781e-66
Identity = 124/235 (52.77%), Postives = 172/235 (73.19%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            AK+I F   +R  + +G++KL+DAV +T+GPRGRNV+L + FG+P +  DGV++AR IEL D +EN GA L++EVASKTND AGDGTTTA+VLA  I K GL +VT+GANP+SLKRG+DK    ++ EL+K ++ +  + +I+ VATISA +D  IG MIA+A+DKVG DGV+                GM+ DRGY+SP FVTNPEK+I EF N  +L+ D+KIS++K+++P+L
Sbjct:    2 AKEILFSDNARNRLYSGVEKLADAVKVTMGPRGRNVLLQKSFGAPTITKDGVSVAREIELKDTLENMGAQLVKEVASKTNDEAGDGTTTATVLAHSIFKEGLRNVTAGANPISLKRGMDKACEAILAELKKSSKVVANKTEIEQVATISANSDSAIGKMIAEAMDKVGKDGVITVEEAKGISDELDVVEGMQFDRGYLSPYFVTNPEKMIAEFNNPFILLYDKKISSLKEMLPIL 236          
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH60_GEMAT (60 kDa chaperonin OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=groL PE=3 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 6.245e-66
Identity = 125/236 (52.97%), Postives = 179/236 (75.85%), Query Frame = 1
Query:  196 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            +AK++ F+  +RAA++ G+D+L++AV +TLGP+GRNVV+D+ FG+P V  DGVT+A+ IELADP+EN GA +++EVA+KT+D AGDGTTTA+VLA+ I + GL +VT+G+NP++LKRGI+K V G+VEEL++ + P  G+ +I  V TISA ND  IG +IA+A++KVG DGV+                GM+ DRGY+SP FVT+PEK+    ENA +L+ D+KISA+KD++P L
Sbjct:    2 AAKELHFNVDARAALKRGVDQLAEAVKVTLGPKGRNVVIDKKFGAPTVTKDGVTVAKEIELADPIENMGAQMVKEVATKTSDLAGDGTTTATVLAQAIFREGLKNVTAGSNPMALKRGIEKAVAGIVEELKRISVPTTGKKEIAQVGTISANNDPEIGNLIAEAMEKVGKDGVITVEEAKGLETTLETVDGMQFDRGYLSPYFVTDPEKMEAVLENALILIHDKKISAMKDLLPAL 237          
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH60_AMOA5 (60 kDa chaperonin OS=Amoebophilus asiaticus (strain 5a2) GN=groL PE=3 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 4.048e-65
Identity = 122/235 (51.91%), Postives = 169/235 (71.91%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            AK I FD  +RA +++G+D +++AV +TLGP+GRNVV+D+ +G+P +  DG+++A+ IEL DP+EN GA LI+EVASKT D AGDGTTTA+VLA+ I   G+ +V +GANP+ LKRG+DK +  +VE L++ +R I    +I+ VATISA ND  IG MIADA+DKVG DGV+                GME DRGY+SP FVTN EK+  E  NA +L+ D+KIS +K+++P+L
Sbjct:    2 AKHIIFDSEARAKLKSGVDTMANAVKVTLGPKGRNVVIDKKYGAPSITKDGISVAKEIELKDPVENLGAQLIKEVASKTADGAGDGTTTATVLAQSIFSAGIKNVAAGANPMDLKRGVDKAIEAVVERLKQNSRKISNSKEIEQVATISANNDSKIGKMIADAMDKVGKDGVITVEEAKGTETEVKVVEGMEFDRGYLSPYFVTNTEKMEAELGNAYILICDKKISVMKELLPIL 236          
BLAST of CX672016 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 5.286e-65
Identity = 125/235 (53.19%), Postives = 173/235 (73.62%), Query Frame = 1
Query:  199 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTMIADAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLL 900
            AK + FD+ +R A++ GID L++AV +TLGP+GRNVVL++ FG+P+++NDGVTIA+ IEL + +EN GA LI+EVASKTND AGDGTTTA VLA+ ++K GL +V +G+NP++LKRG++KTV  LV ELEK A+P+EG   I  VA +SAGNDD IG MIA A++ VG +GV+                GM+ DRGY+SP  VT+ E++   F+   +L+TD+KIS I D++P+L
Sbjct:    2 AKQVVFDETARRALERGIDALANAVRVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIELENKLENTGAQLIKEVASKTNDVAGDGTTTACVLAQSLVKEGLKNVAAGSNPMNLKRGMEKTVRHLVAELEKVAKPVEGSQAIAQVAAVSAGNDDEIGEMIARAMETVGKEGVITVEESKSLTTELEVTEGMQFDRGYVSPYLVTDQERMEAVFDEPFLLITDKKISIITDLVPIL 236          
The following BLAST results are available for this feature:
BLAST of CX672016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_ANAVT1.029e-6855.3260 kDa chaperonin 2 OS=Anabaena variabilis (strain... [more]
CH602_ANASP2.995e-6854.8960 kDa chaperonin 2 OS=Anabaena sp. (strain PCC 71... [more]
CH601_SYNJA2.995e-6853.6260 kDa chaperonin 1 OS=Synechococcus sp. (strain J... [more]
CH601_TRIEI3.911e-6854.4760 kDa chaperonin 1 OS=Trichodesmium erythraeum (s... [more]
CH602_GLOVI6.672e-6855.3260 kDa chaperonin 2 OS=Gloeobacter violaceus GN=gr... [more]
CH60_DESAP4.781e-6654.2460 kDa chaperonin OS=Desulforudis audaxviator (str... [more]
CH60_ARCB44.781e-6652.7760 kDa chaperonin OS=Arcobacter butzleri (strain R... [more]
CH60_GEMAT6.245e-6652.9760 kDa chaperonin OS=Gemmatimonas aurantiaca (stra... [more]
CH60_AMOA54.048e-6551.9160 kDa chaperonin OS=Amoebophilus asiaticus (strai... [more]
CH601_GLOVI5.286e-6553.1960 kDa chaperonin 1 OS=Gloeobacter violaceus GN=gr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14E02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14E02-I4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672016 ID=CX672016; Name=CX672016; organism=Citrus sinensis; type=EST; length=900bp
CTTGTTGGTACCTTATCCGAAACAATTTCCCTCAGCAGACCCTTTACTCC
GTTTGGTTGATTGTTCGAAATGGCTTCTGCTAACGCCCTTTCTTCGGCTT
CCATTCTTTGCTCTCCCAAACAGGGGAGCTTGAGGAGGAGAGGAAATCAG
AATCAGGGTCAGAGAGTAAATTACAGGAGATTCGCTGTTAGAGCGTCTGC
CAAAGATATTGCTTTTGACCAGAGGTCCAGGGCCGCAATGCAGGCCGGCA
TCGATAAGCTTTCCGATGCTGTTGGCCTTACTCTTGGTCCAAGAGGGAGA
AATGTTGTTCTGGATGAATTTGGGAGTCCGAAAGTGGTTAATGATGGAGT
AACAATAGCCCGAGCTATTGAGCTCGCAGATCCCATGGAAAATGCTGGTG
CTGCTCTTATTAGGGAGGTTGCAAGCAAAACCAATGACTCTGCTGGTGAT
GGAACAACAACTGCATCAGTTCTTGCACGAGAAATAATTAAACTAGGACT
CCTGAGTGTCACGTCTGGTGCAAATCCTGTCTCCTTGAAGAGAGGGATTG
ATAAAACTGTACATGGGTTGGTAGAAGAGTTGGAGAAGAGGGCCAGGCCT
ATCGAAGGTCGTGATGATATCAAAGCTGTTGCTACCATCTCTGCTGGGAA
TGATGACCTGATTGGGACAATGATCGCCGATGCAATTGACAAGGTTGGTC
CTGATGGCGTCTTGTCAATCGAGTCATCATCATCATTTGAGACTACTGTT
GAAGTTGAGGAAGGAATGGAGATTGACAGGGGTTACATCTCTCCTCAGTT
TGTCACAAACCCTGAGAAATTAATTGTTGAATTTGAGAATGCTAGAGTGC
TGGTCACGGATCAAAAAATTTCTGCAATAAAGGATATAATTCCCTTGTTA
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