CX672010

Overview
NameCX672010
Unique NameCX672010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX672010_ssr301 microsatellite CX672010_ssr301:301..318. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1113..1910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.942e-47
Identity = 97/157 (61.78%), Postives = 111/157 (70.70%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            D+I + HMKKMK+ AIVCNIGHFDNEI V  L  + G  RI IKPQ D++VF E    I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK      Y+  VY LPKHLDE+V           LT L+KEQADYI V  +GPYKP HYRY
Sbjct:  320 DVITLEHMKKMKDEAIVCNIGHFDNEIQVDALNNFKGATRINIKPQVDKYVF-EDGRCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWK----NNYDVDVYRLPKHLDEEVARLHLGQIGVKLTTLSKEQADYIGVPVEGPYKPEHYRY 471
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.184e-46
Identity = 96/157 (61.15%), Postives = 114/157 (72.61%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII + HMK MK+ AI+ NIGHFDNEID+  LE   G  R+TIKPQ D W F E+   IIVL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTK+QA+YI V  +GPYKP HYRY
Sbjct:  341 DIITLDHMKAMKDQAILGNIGHFDNEIDMAALER-SGATRLTIKPQVDLWTFGESGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKPE--EYDNEVYRLPKHLDEKVARIHVEALGGTLTKLTKDQAEYIGVDVEGPYKPEHYRY 494
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.546e-46
Identity = 94/157 (59.87%), Postives = 114/157 (72.61%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  342 DIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.546e-46
Identity = 94/157 (59.87%), Postives = 114/157 (72.61%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  342 DIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.546e-46
Identity = 94/157 (59.87%), Postives = 114/157 (72.61%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  342 DIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBP (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.546e-46
Identity = 94/157 (59.87%), Postives = 114/157 (72.61%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  342 DIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBO (Adenosylhomocysteinase OS=Mycobacterium bovis GN=ahcY PE=1 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.546e-46
Identity = 94/157 (59.87%), Postives = 114/157 (72.61%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  342 DIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.675e-46
Identity = 96/157 (61.15%), Postives = 114/157 (72.61%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            D+I + HMK+M++ AIVCNIGHFDNEI V  L   P VK I IKPQ D+++FP  N  + +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW++    +Y   VY LPK LDE+V           LTRLT EQA+YI VSADGPYKP HYRY
Sbjct:  320 DVITLEHMKQMRDEAIVCNIGHFDNEIQVDKLNNDPTVKIINIKPQVDKYIFPNGNC-MYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQK----EYAVDVYRLPKALDEEVARLHLEQIGVRLTRLTPEQAEYIGVSADGPYKPEHYRY 471
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.710e-45
Identity = 93/157 (59.24%), Postives = 113/157 (71.97%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DIIM+ H+K MK+++I+ NIGHFDNEID+ GLE   G  R  IKPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  339 DIIMLEHIKAMKDHSILGNIGHFDNEIDMAGLER-SGATRTNIKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.710e-45
Identity = 93/157 (59.24%), Postives = 113/157 (71.97%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DIIM+ H+K MK+++I+ NIGHFDNEID+ GLE   G  R  IKPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  339 DIIMLEHIKAMKDHSILGNIGHFDNEIDMAGLER-SGATRTNIKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492
The following BLAST results are available for this feature:
BLAST of CX672010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
SAHH_CHLP86.942e-4761.78Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]
SAHH_NOCFA1.184e-4661.15Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_MYCTU1.546e-4659.87Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA1.546e-4659.87Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCBT1.546e-4659.87Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBP1.546e-4659.87Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBO1.546e-4659.87Adenosylhomocysteinase OS=Mycobacterium bovis GN=a... [more]
SAHH_CHLCH7.675e-4661.15Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]
SAHH_MYCUA1.710e-4559.24Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM1.710e-4559.24Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D11-G22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672010 ID=CX672010; Name=CX672010; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAACA
AGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATAAT
CCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCAAT
CAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAACA
CACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATTGA
AAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTCAC
TCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTA
AGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCC
TGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCTCA
TCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCT
CTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAAC
AGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGA
CGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCA
CCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCT
CAAGACCGAGCACATCAATTTCATTATCAAAGTGACCAATGTTGCAAACA
ATTGCATTGTTCTTCATCTTCTTCATGTGGCCAACCATGATGATGTCC
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