CX672010

Overview
NameCX672010
Unique NameCX672010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX672010_ssr301 microsatellite CX672010_ssr301:301..318. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1113..1910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_ANASP (Adenosylhomocysteinase OS=Anabaena sp. (strain PCC 7120) GN=ahcY PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.145e-15
Identity = 53/143 (37.06%), Postives = 75/143 (52.45%), Query Frame = -2
Query:  354 HMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRIT-IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 779
            H   MK+ AIVCN GHFD E+D+  L      K I  ++P T+ +      S ++VL +GRL+NL  A GHPS VM  SF NQ +A   L K K  GK    ++ +P  +D+++           +  LT EQ +YI+    G
Sbjct:  287 HFDVMKDGAIVCNSGHFDLELDLKYLAA--NAKEIKEVRPFTEEYKLTNGKS-VVVLGQGRLINLAAAEGHPSAVMDMSFANQALACEYLVKNK--GKLAPGLHSIPVEVDQEIARLKLQAMGIYIDSLTPEQIEYINSWTSG 424          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_METMP (Adenosylhomocysteinase OS=Methanococcus maripaludis GN=ahcY PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14
Identity = 53/151 (35.10%), Postives = 77/151 (50.99%), Query Frame = -2
Query:  354 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSG---IIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 797
            DI+ + H   MK+ A++ N GHFDNEI+   L      K ++   +  R+   E + G   I +L EGRL+NL CA GHP  VM  SF NQ ++   + + K  GK E +VY +P   D K+           +  L+ EQ  Y+S   +G
Sbjct:  272 DILRMEHFLLMKDGAVLSNAGHFDNEINKNDL------KELSKSVKEARFNIEEYDLGNKKIYLLGEGRLVNLACADGHPCEVMDMSFANQALSAKFIKENK--GKLENEVYEIPYEQDFKIALLKLHSMGADIDELSPEQRKYLSDWKEG 414          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PYRKO (Adenosylhomocysteinase OS=Pyrococcus kodakaraensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.726e-13
Identity = 49/136 (36.03%), Postives = 72/136 (52.94%), Query Frame = -2
Query:  372 HMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYI 779
            H + MK+ AI+ N GHFD EI    LE    V+    +P    +   +    + +LAEGRL+NL  A GHP+ +M  SF  Q  A+   + +++ G+ E KVYVLP+ +DE V           +  LT+EQ  Y+
Sbjct:  283 HFELMKDGAILANAGHFDVEISKPDLEAL-AVEISEPRPNITEYKMADGRR-LYLLAEGRLVNLAAADGHPAEIMDMSFALQ--AKAAEYIKENRGRLEPKVYVLPREIDEMVARIKLASMGIKIEELTEEQKKYL 414          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_THEMA (Adenosylhomocysteinase OS=Thermotoga maritima GN=ahcY PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.461e-12
Identity = 46/142 (32.39%), Postives = 71/142 (50.00%), Query Frame = -2
Query:  372 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYI 797
            D++    +  +K+ A++ N GHF+ EI V  LE    V++   +P    +   E    + +LAEGRL+NL    GHP  +M  SF  Q+ A L L +     K   KVY+LP  +DE+V           +  LT++Q  Y+
Sbjct:  263 DVLSKEDILSLKDGAVLANAGHFNVEIPVRVLEEI-AVEKFEARPNVTGYTL-ENGKTVFLLAEGRLVNLAAGDGHPVEIMDLSFALQIFAVLYLLENHR--KMSPKVYMLPDEIDERVARMKLDSLGVKIDELTEKQRRYL 400          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_METKA (Adenosylhomocysteinase OS=Methanopyrus kandleri GN=ahcY PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.492e-12
Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = -2
Query:  354 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 797
            D+I   H++KMK+  I+ N GHFD EID   LE +   K          +  P+    + ++AEGRL+NL    GHP  +M  SF  Q ++   L KE    + E  VY +PK +D++V           L  LT EQ +Y+    +G
Sbjct:  279 DVIRGEHIEKMKDGVILANAGHFDVEIDKEYLEEHCEEKIDRRGGLVTEYRMPD-GKRVYLIAEGRLVNLAAGEGHPIEIMDISFALQALSVEVLAKEGK--EMEPGVYKVPKDVDKRVAELKLESMGIELEELTPEQREYMKSWEEG 423          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PYRHO (Adenosylhomocysteinase OS=Pyrococcus horikoshii GN=ahcY PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.551e-12
Identity = 47/136 (34.56%), Postives = 71/136 (52.21%), Query Frame = -2
Query:  372 HMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYI 779
            H + MK+ AI+ N GHFD EI    LE    V+    +P    +   +    + +LA+GRL+NL  A GHP+ +M  SF  Q  A+   + + + GK E +VY+LP+ +DE V           +  LT+EQ  Y+
Sbjct:  283 HFELMKDGAIMANAGHFDVEIWKPDLEEL-AVEISNPRPNVTEYKLKDGRR-LYLLADGRLVNLVAADGHPAEIMDMSFALQ--AKAAEYIKDNHGKLEPRVYILPREIDEMVARIKLASMGIEIEELTEEQKKYL 414          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PYRAB (Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahcY PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.700e-11
Identity = 46/136 (33.82%), Postives = 71/136 (52.21%), Query Frame = -2
Query:  372 HMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYI 779
            H + MK+ AI+ N GHFD EI    LE    V+    +P    +   +    + +LA+GRL+NL  A GHP+ +M  SF  Q  A+   + +++  + E +VYVLP+ +DE V           +  LT+EQ  Y+
Sbjct:  284 HFELMKDGAIMANAGHFDVEIWKPDLEEL-AVEISNPRPNVTEYKLKDGRR-LYLLADGRLVNLVAADGHPAEIMDMSFALQ--AKAAEYIKENHERLEPRVYVLPREIDEMVARIKLQSMGINIEELTEEQKKYL 415          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PYRFU (Adenosylhomocysteinase OS=Pyrococcus furiosus GN=ahcY PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.138e-11
Identity = 46/136 (33.82%), Postives = 70/136 (51.47%), Query Frame = -2
Query:  372 HMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYI 779
            H + MK+ AI+ N GHFD EI    LE    V+    +P    +   +    + +LA+GRL+NL  A GHP+ +M  SF  Q  A+   + + +  + E KVY+LP+ +DE V           +  LT+EQ  Y+
Sbjct:  283 HFELMKDGAIMANAGHFDVEIWKPDLEKL-AVEINNPRPNVTEYKLKDGRR-LYLLADGRLVNLVAADGHPAEIMDMSFALQ--AKAAEYIKDNHERLEPKVYILPREIDEMVARIKLESMGIKIEELTEEQKKYL 414          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_THEVO (Adenosylhomocysteinase OS=Thermoplasma volcanium GN=ahcY PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.016e-11
Identity = 46/148 (31.08%), Postives = 70/148 (47.30%), Query Frame = -2
Query:  354 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADG 797
            D++        K N ++ N GHFDNE+ V  +E +   KR  ++    R+     N+ + V+A+GRL+NL    GHP  +M  SF  Q +    L K       EKKVY +P  +D  V           L  LT++Q  Y++   +G
Sbjct:  266 DVVKYEDALVAKKNIVLANAGHFDNEVAVKEIEKHSLEKR-EVREFVKRYRLENGNT-VDVIADGRLVNLAAGQGHPVEIMDLSFALQALTAEYLVKNHQ--NLEKKVYPVPPEIDRYVAEIRLKQFGGELDTLTEDQIKYLNSWDEG 409          
The following BLAST results are available for this feature:
BLAST of CX672010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
SAHH_ANASP3.145e-1537.06Adenosylhomocysteinase OS=Anabaena sp. (strain PCC... [more]
SAHH_METMP1.195e-1435.10Adenosylhomocysteinase OS=Methanococcus maripaludi... [more]
SAHH_PYRKO1.726e-1336.03Adenosylhomocysteinase OS=Pyrococcus kodakaraensis... [more]
SAHH_THEMA1.461e-1232.39Adenosylhomocysteinase OS=Thermotoga maritima GN=a... [more]
SAHH_METKA2.492e-1233.78Adenosylhomocysteinase OS=Methanopyrus kandleri GN... [more]
SAHH_PYRHO5.551e-1234.56Adenosylhomocysteinase OS=Pyrococcus horikoshii GN... [more]
SAHH_PYRAB4.700e-1133.82Adenosylhomocysteinase OS=Pyrococcus abyssi GN=ahc... [more]
SAHH_PYRFU6.138e-1133.82Adenosylhomocysteinase OS=Pyrococcus furiosus GN=a... [more]
SAHH_THEVO8.016e-1131.08Adenosylhomocysteinase OS=Thermoplasma volcanium G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D11-G22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672010 ID=CX672010; Name=CX672010; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAACA
AGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATAAT
CCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCAAT
CAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAACA
CACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATTGA
AAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTCAC
TCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTA
AGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCC
TGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCTCA
TCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCT
CTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAAC
AGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGA
CGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCA
CCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCT
CAAGACCGAGCACATCAATTTCATTATCAAAGTGACCAATGTTGCAAACA
ATTGCATTGTTCTTCATCTTCTTCATGTGGCCAACCATGATGATGTCC
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