CX672010

Overview
NameCX672010
Unique NameCX672010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX672010_ssr301 microsatellite CX672010_ssr301:301..318. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1113..1910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIN (Adenosylhomocysteinase OS=Leptospira interrogans GN=ahcY PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.233e-45
Identity = 94/157 (59.87%), Postives = 112/157 (71.34%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII + HMK MK+ AI+CNIGHFD EI +  L    GV +  IKPQ D++ FP+  S IIVLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP HYRY
Sbjct:  285 DIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNNEKGVTKKEIKPQVDKYTFPDGKS-IIVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPINGPFKPDHYRY 436
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIC (Adenosylhomocysteinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ahcY PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.233e-45
Identity = 94/157 (59.87%), Postives = 112/157 (71.34%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII + HMK MK+ AI+CNIGHFD EI +  L    GV +  IKPQ D++ FP+  S IIVLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP HYRY
Sbjct:  285 DIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNNEKGVTKKEIKPQVDKYTFPDGKS-IIVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPINGPFKPDHYRY 436
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_TRIVA (Adenosylhomocysteinase OS=Trichomonas vaginalis PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.916e-45
Identity = 94/157 (59.87%), Postives = 116/157 (73.89%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII V  M +MK+ AIV NIGHFDNEID  GL  YPG+K I IKP+ D W FP+ ++ I++LAEGRL+NLGCATGHPSFVMS SFTNQ +AQL+L++++  G  E KVY LPKHLDE+V           LT+LT++QADYI+V  +GPYK   YRY
Sbjct:  333 DIISVDMMAQMKDKAIVGNIGHFDNEIDTDGLMKYPGIKHIPIKPEYDMWEFPDGHA-ILLLAEGRLLNLGCATGHPSFVMSMSFTNQTLAQLDLYEKR--GNLEMKVYTLPKHLDEEVVRLHLGSLDVHLTKLTQKQADYINVPVEGPYKSDAYRY 486
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.975e-45
Identity = 94/157 (59.87%), Postives = 111/157 (70.70%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII + HMK MK+ AI+ NIGHFDNEI +  LE    +K   I+PQ D W FP+T   IIVL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+YI V  DGPYK  HYRY
Sbjct:  343 DIITLEHMKAMKDKAILGNIGHFDNEIQIARLEKSGAIKT-NIRPQVDLWTFPDTGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEYIGVDVDGPYKADHYRY 496
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLE (Adenosylhomocysteinase OS=Mycobacterium leprae GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.975e-45
Identity = 92/157 (58.60%), Postives = 112/157 (71.34%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII++ HMK MK++AI+ NIGHFDNEID+  LE   G  R+ IKPQ D W F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  339 DIILLEHMKAMKDHAILGNIGHFDNEIDMAALER-SGATRLNIKPQVDLWTFGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYCLB (Adenosylhomocysteinase OS=Mycobacterium leprae (strain Br4923) GN=ahcY PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.975e-45
Identity = 92/157 (58.60%), Postives = 112/157 (71.34%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII++ HMK MK++AI+ NIGHFDNEID+  LE   G  R+ IKPQ D W F ++   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +     Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  DGP+KP HYRY
Sbjct:  339 DIILLEHMKAMKDHAILGNIGHFDNEIDMAALER-SGATRLNIKPQVDLWTFGDSGKSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--DYDNEVYRLPKHLDEKVARVHVEALGGQLTKLTKDQAEYLGVDVDGPFKPDHYRY 492
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.486e-45
Identity = 95/156 (60.90%), Postives = 110/156 (70.51%), Query Frame = -2 
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   HM+ MK+ AIVCNIGHFDNEID+  LET PG   + IKPQ D+W   ++   IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY+LPK LDE+V           LT LTKEQADYI V  DGPYKP HYRY
Sbjct:  328 VITGEHMEAMKDEAIVCNIGHFDNEIDMHYLETTPGCTCLNIKPQVDKWTL-KSGRSIIVLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIEL---ATNPDLERKVYILPKKLDEQVARLHLARLGVTLTTLTKEQADYIGVPVDGPYKPGHYRY 479
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.108e-44
Identity = 92/157 (58.60%), Postives = 113/157 (71.97%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII + HMK MK+ AI+CNIGHFD EI +  L +  GV +  IKPQ D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP +YRY
Sbjct:  285 DIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNSEKGVTKKEIKPQVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.108e-44
Identity = 92/157 (58.60%), Postives = 113/157 (71.97%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII + HMK MK+ AI+CNIGHFD EI +  L +  GV +  IKPQ D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP +YRY
Sbjct:  285 DIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNSEKGVTKKEIKPQVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436
[Close]
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.108e-44
Identity = 93/157 (59.24%), Postives = 111/157 (70.70%), Query Frame = -2 
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            D+I + H+K+M++ AIVCNIGHFDNEI V  L  + G  RI IKPQ D++VF E  + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW+      Y+  VY LPK LDE+V           LT LTKEQADYI V  +GPYKP HYRY
Sbjct:  320 DVITLDHIKQMRDEAIVCNIGHFDNEIQVDALNNFKGATRINIKPQVDKYVF-ENGNCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQ----NDYKVGVYRLPKKLDEEVARLHLGQIGAKLTTLTKEQADYIGVPVEGPYKPEHYRY 471
The following BLAST results are available for this feature:
BLAST of CX672010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
SAHH_LEPIN2.233e-4559.87Adenosylhomocysteinase OS=Leptospira interrogans G... [more]
SAHH_LEPIC2.233e-4559.87Adenosylhomocysteinase OS=Leptospira interrogans s... [more]
SAHH_TRIVA2.916e-4559.87Adenosylhomocysteinase OS=Trichomonas vaginalis PE... [more]
SAHH_MYCPA4.975e-4559.87Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_MYCLE4.975e-4558.60Adenosylhomocysteinase OS=Mycobacterium leprae GN=... [more]
SAHH_MYCLB4.975e-4558.60Adenosylhomocysteinase OS=Mycobacterium leprae (st... [more]
SAHH_DESVM8.486e-4560.90Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_LEPBL1.108e-4458.60Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ1.108e-4458.60Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_CHLTE1.108e-4459.24Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D11-G22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672010 ID=CX672010; Name=CX672010; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAACA
AGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATAAT
CCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCAAT
CAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAACA
CACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATTGA
AAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTCAC
TCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTA
AGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCC
TGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCTCA
TCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCT
CTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAAC
AGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGA
CGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCA
CCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCT
CAAGACCGAGCACATCAATTTCATTATCAAAGTGACCAATGTTGCAAACA
ATTGCATTGTTCTTCATCTTCTTCATGTGGCCAACCATGATGATGTCC
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