CX672010

Overview
NameCX672010
Unique NameCX672010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX672010_ssr301 microsatellite CX672010_ssr301:301..318. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1113..1910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.565e-43
Identity = 91/164 (55.49%), Postives = 113/164 (68.90%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRIT---IKPQ----TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII+  HMK+M N+AI+CNIGHFD EID+   E      + T   IKP      DR+ F +T   II+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL++ +   KY  +VY+LPK LDE+V           LT+LT+EQADYI V  +GPYKP HYRY
Sbjct:  285 DIILGEHMKQMPNDAILCNIGHFDTEIDIAWAEQQVADGKATVSEIKPSDIGAVDRFTFNDTGRSIIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQMELYQNRDNDKYGVQVYLLPKELDEEVARLHLEAIGVKLTKLTQEQADYIGVPVEGPYKPNHYRY 448          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PROMP (Adenosylhomocysteinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.565e-43
Identity = 94/156 (60.26%), Postives = 112/156 (71.79%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   ++ KMK+ AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +  + +Y K+VYVLPKHLDE V           LT+LTK+QADYI+VS +GPYKP  YRY
Sbjct:  323 VITNDNLIKMKDEAIVCNIGHFDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNK--SDEYSKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKDQADYINVSVEGPYKPEQYRY 472          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PROM9 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.656e-43
Identity = 95/156 (60.90%), Postives = 111/156 (71.15%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   ++ KMK+ AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    KY K+VYVLPKHLDE V           LT+LT+EQADYI+VS +GPYKP  YRY
Sbjct:  323 VITNKNLVKMKDEAIVCNIGHFDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--KYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY 472          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PROM2 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.081e-43
Identity = 95/156 (60.90%), Postives = 110/156 (70.51%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   ++ KMKN AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT+LTKEQADYI+VS +GPYK   YRY
Sbjct:  323 VITKENLVKMKNEAIVCNIGHFDNEIDVASLKNYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--QYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYINVSVEGPYKSELYRY 472          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PROMM (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.942e-43
Identity = 94/156 (60.26%), Postives = 109/156 (69.87%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   H+ +MK+ AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y  +VYVLPKHLDE V           LT LTK+QADYISV  +GPYKP HYRY
Sbjct:  327 VIRHEHLIRMKDEAIVCNIGHFDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--QYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPVEGPYKPDHYRY 476          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_DESVV (Adenosylhomocysteinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.942e-43
Identity = 92/157 (58.60%), Postives = 109/157 (69.43%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            ++I   HM+ MK+ AIVCNIGHFDNEID+  LE   G   + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V           LTRL+K+QADYI VS +GP+KP HYRY
Sbjct:  327 NVITGAHMEAMKDEAIVCNIGHFDNEIDMHYLENTEGCVCLNIKPQVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_DESVH (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.942e-43
Identity = 92/157 (58.60%), Postives = 109/157 (69.43%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            ++I   HM+ MK+ AIVCNIGHFDNEID+  LE   G   + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V           LTRL+K+QADYI VS +GP+KP HYRY
Sbjct:  327 NVITGAHMEAMKDEAIVCNIGHFDNEIDMHYLENTEGCVCLNIKPQVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.942e-43
Identity = 92/157 (58.60%), Postives = 112/157 (71.34%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII   HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    ++VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  288 DIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLMVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.037e-42
Identity = 94/156 (60.26%), Postives = 110/156 (70.51%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   H+ KMK+ AIVCNIGHFDNEIDV  L+ Y   K   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  327 VIRNEHLVKMKDEAIVCNIGHFDNEIDVASLKDY---KWDNIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTK--ANEYGKEVYVLPKHLDEMVARLHLSKIGANLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.037e-42
Identity = 94/156 (60.26%), Postives = 112/156 (71.79%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   H+ KMK+ AIVCNIGHFDNEIDV  L++Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + S  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  327 VIRNEHLVKMKDEAIVCNIGHFDNEIDVASLKSY---EWDNIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGS--EYGKEVYVLPKHLDEMVARLHLEKIGCKLTELSKDQADYINVPVEGPYKPDHYRY 476          
The following BLAST results are available for this feature:
BLAST of CX672010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
SAHH_RHOBA3.565e-4355.49Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_PROMP3.565e-4360.26Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROM94.656e-4360.90Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROM26.081e-4360.90Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROMM7.942e-4360.26Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_DESVV7.942e-4358.60Adenosylhomocysteinase OS=Desulfovibrio vulgaris s... [more]
SAHH_DESVH7.942e-4358.60Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_COXB17.942e-4358.60Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_SYNS91.037e-4260.26Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SYNS31.037e-4260.26Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D11-G22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672010 ID=CX672010; Name=CX672010; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAACA
AGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATAAT
CCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCAAT
CAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAACA
CACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATTGA
AAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTCAC
TCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTA
AGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCC
TGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCTCA
TCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCT
CTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAAC
AGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGA
CGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCA
CCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCT
CAAGACCGAGCACATCAATTTCATTATCAAAGTGACCAATGTTGCAAACA
ATTGCATTGTTCTTCATCTTCTTCATGTGGCCAACCATGATGATGTCC
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