CX672010

Overview
NameCX672010
Unique NameCX672010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX672010_ssr301 microsatellite CX672010_ssr301:301..318. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1113..1910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.037e-42
Identity = 93/157 (59.24%), Postives = 108/157 (68.79%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            D+I V  M+KMKNNAIVCNIGHFD+EI + GL  +   K   IKPQ     FP+    +IVL+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW  K+  KYE +VY LPKHLDEKV           LT L K+QADYI V   GP+KP HYRY
Sbjct:  313 DVITVDDMRKMKNNAIVCNIGHFDSEIQIAGLRNF---KWDEIKPQVHHVEFPDGKK-LIVLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTNKA--KYENQVYTLPKHLDEKVAFLHLEKLGAKLTTLRKDQADYIGVPEAGPFKPDHYRY 463          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.355e-42
Identity = 92/158 (58.23%), Postives = 107/158 (67.72%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   HM KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV           LT LT +QA YI VS +GPYK  HYRY
Sbjct:  321 VITHDHMAKMKDQAIVCNIGHFDNEIDIASVEKYQWEE---IKPQVDHVIFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAVKGSNKYPVGVYTLPKHLDEKVARLQLKKLNAQLTELTDQQAAYIGVSKEGPYKADHYRY 474          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PELLD (Adenosylhomocysteinase OS=Pelodictyon luteolum (strain DSM 273) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.355e-42
Identity = 90/157 (57.32%), Postives = 107/157 (68.15%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            D++ + HMK+M + AIVCNIGHFDNEI V  L  Y G  ++ IKPQ D++ F E    I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK      Y+  VY LPK LDE+V           LT L+KEQA+YI V   GPYKP HYRY
Sbjct:  320 DVVTLEHMKQMPDEAIVCNIGHFDNEIQVEPLNEYKGATKLNIKPQVDKYTF-EDGHCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWK----NDYKVDVYRLPKALDEEVARLHLEQIGVKLTTLSKEQAEYIGVPVTGPYKPEHYRY 471          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_COXBU (Adenosylhomocysteinase OS=Coxiella burnetii GN=ahcY PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.355e-42
Identity = 92/157 (58.60%), Postives = 111/157 (70.70%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII   HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  288 DIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_COXBN (Adenosylhomocysteinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ahcY PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.355e-42
Identity = 92/157 (58.60%), Postives = 111/157 (70.70%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII   HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  288 DIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_COXB2 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuG_Q212) GN=ahcY PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.355e-42
Identity = 92/157 (58.60%), Postives = 111/157 (70.70%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII   HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  288 DIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.311e-42
Identity = 91/157 (57.96%), Postives = 108/157 (68.79%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII + HM+ MK+ AIVCNIGHFDNEI + GL     +K   IKPQ D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV           LT L K+QADYI V  +GPYK  HYRY
Sbjct:  321 DIITIEHMRAMKDRAIVCNIGHFDNEIQIAGLRN---LKWTNIKPQVDEIEFPDKHR-IIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.018e-42
Identity = 93/156 (59.62%), Postives = 112/156 (71.79%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   H++KMK+ AIVCNIGHFDNEIDV  L+ Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  327 VIRNEHLEKMKDEAIVCNIGHFDNEIDVASLKGY---EWDNIKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPYKPDHYRY 476          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PROM3 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.018e-42
Identity = 94/156 (60.26%), Postives = 108/156 (69.23%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   H+ +MK+ AIVCNIGHFDNEIDV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    KY  +VYVLPKHLDE V           LT LTK+QADYISV  +GPYKP HYRY
Sbjct:  327 VIRHEHLIRMKDEAIVCNIGHFDNEIDVASLKDYSWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--KYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPIEGPYKPDHYRY 476          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_ZYMMO (Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.942e-42
Identity = 92/157 (58.60%), Postives = 113/157 (71.97%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII + HM+ MK +AIVCNIGHFD+EI +  L     +K   IKPQ D   FP+    IIVLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   +T KY+K VY+LPKHLDEKV           L++LT++QADYI V  +GP+KP HYRY
Sbjct:  314 DIITLDHMRAMKQHAIVCNIGHFDSEIQINSLAN---MKWTEIKPQVDLVKFPDGKE-IIVLAKGRLVNLGCATGHPSFVMSASFTNQVLAQIELF--CNTDKYQKDVYMLPKHLDEKVAALHLPKLGVHLSKLTQKQADYIGVPVNGPFKPDHYRY 464          
The following BLAST results are available for this feature:
BLAST of CX672010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
SAHH_CAUCR1.037e-4259.24Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_RALPJ1.355e-4258.23Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_PELLD1.355e-4257.32Adenosylhomocysteinase OS=Pelodictyon luteolum (st... [more]
SAHH_COXBU1.355e-4258.60Adenosylhomocysteinase OS=Coxiella burnetii GN=ahc... [more]
SAHH_COXBN1.355e-4258.60Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB21.355e-4258.60Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_BRAJA2.311e-4257.96Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_SYNPX3.018e-4259.62Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_PROM33.018e-4260.26Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_ZYMMO3.942e-4258.60Adenosylhomocysteinase OS=Zymomonas mobilis GN=ahc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D11-G22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672010 ID=CX672010; Name=CX672010; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAACA
AGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATAAT
CCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCAAT
CAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAACA
CACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATTGA
AAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTCAC
TCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTA
AGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCC
TGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCTCA
TCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCT
CTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAAC
AGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGA
CGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCA
CCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCT
CAAGACCGAGCACATCAATTTCATTATCAAAGTGACCAATGTTGCAAACA
ATTGCATTGTTCTTCATCTTCTTCATGTGGCCAACCATGATGATGTCC
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