CX672010

Overview
NameCX672010
Unique NameCX672010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX672010_ssr301 microsatellite CX672010_ssr301:301..318. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1113..1910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_DESDG (Adenosylhomocysteinase OS=Desulfovibrio desulfuricans (strain G20) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.498e-41
Identity = 92/156 (58.97%), Postives = 106/156 (67.95%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   HM++MK+ AIVCNIGHFDNEID+  LE       + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQV+AQLEL    S    E+KVY+LPK LDE+V           LT LT EQA+YI V   GP+KP HYRY
Sbjct:  328 VITGEHMERMKDEAIVCNIGHFDNEIDMAYLEDSTECSCLNIKPQVDKWTLKSGRS-IIVLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQLEL---ASNPDLERKVYILPKKLDEEVARLHLARLGAKLTTLTDEQAEYIGVDKTGPFKPDHYRY 479          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.956e-41
Identity = 90/157 (57.32%), Postives = 110/157 (70.06%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            D++ + HM+KMK+  I+ NIGHFDNEI V  L  +   K + IKPQ D   FP+    II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW   S  +YE KVYVLPKHLDEKV           LT+L+ EQA YI V+ +GP+KP HYRY
Sbjct:  315 DVVSLDHMRKMKDMVILGNIGHFDNEIQVAALRNF---KWVNIKPQVDLIEFPD-GKRIILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELWTRGS--QYENKVYVLPKHLDEKVARLHLAKLGANLTKLSPEQAAYIGVTPEGPFKPDHYRY 465          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_BURXL (Adenosylhomocysteinase OS=Burkholderia xenovorans (strain LB400) GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.956e-41
Identity = 90/151 (59.60%), Postives = 107/151 (70.86%), Query Frame = -2
Query:  327 HMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 779
            HMK M++NAIVCNIGHFD+EIDV     Y   +   IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ + +  KYE KVYVLPKHLDEKV           LT L+ EQA YI V  +GP+KP HYRY
Sbjct:  329 HMKAMRHNAIVCNIGHFDSEIDVASTRQY---QWDNIKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTQGN--KYENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY 473          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.555e-41
Identity = 90/157 (57.32%), Postives = 105/157 (66.88%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DIIM   M KMK+ AIV NIGHFDNEID+ GL   PG+ +  +KPQ   W FP+    +IVL+EGRL+NLG ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV           LT L  EQA YI V  DGPYKP HYRY
Sbjct:  316 DIIMASDMAKMKHQAIVGNIGHFDNEIDMAGLAQIPGIVKDEVKPQVHTWKFPD-GKVLIVLSEGRLLNLGNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQASYIGVEVDGPYKPDHYRY 469          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_PLACH (Adenosylhomocysteinase OS=Plasmodium chabaudi GN=PC000295.02.0 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.337e-41
Identity = 87/158 (55.06%), Postives = 109/158 (68.99%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DII + H+ KMKNNA+V NIGHFD+EI +  L ++ G++   +KPQ DR   P  N  IIVLA+GRL+NL CATGHP+FVMS SF NQV AQLELW+ ++TGKYEK K Y+LPK LDEKV           LT L   Q +++ VS +GP+K   YRY
Sbjct:  323 DIIKLEHLLKMKNNAVVGNIGHFDDEIQIADLFSHEGIEIENVKPQVDRVTLPNGNK-IIVLAQGRLLNLACATGHPAFVMSFSFCNQVFAQLELWENRNTGKYEKNKSYILPKELDEKVAYYHLKKLNATLTELDDNQCEFLGVSKNGPFKSEAYRY 479          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_SOLUE (Adenosylhomocysteinase OS=Solibacter usitatus (strain Ellin6076) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.358e-41
Identity = 90/157 (57.32%), Postives = 106/157 (67.52%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            +II + HM+ MK+ AIVCNIGHFDNEI +  L      KR+ IKPQ D + FP   S I +LAEGRL+NLGCATGHPSFVMS SF NQ +AQL+LWK K T  Y+  VY LPK LDE+V           LT LT  QA+Y+ V  +GPYKP HYRY
Sbjct:  323 EIITLEHMRLMKDQAIVCNIGHFDNEIQMDRLNE-SDAKRLQIKPQVDMYTFPG-GSSIFILAEGRLVNLGCATGHPSFVMSNSFANQTLAQLDLWKNKDT--YKVGVYTLPKKLDEEVARLHLEKIGVKLTTLTPAQAEYLGVPVEGPYKPDHYRY 475          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_FLAPJ (Adenosylhomocysteinase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=ahcY PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.358e-41
Identity = 85/157 (54.14%), Postives = 105/157 (66.88%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DI++  H ++MK+  IVCNIGHFDNEID+  L    G  +I IKPQ D++        I++LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW  K++  Y   VY+LPKHLDEKV           L  L  +QA YI V  DGP+KP +YRY
Sbjct:  286 DIVLGSHFEQMKDKTIVCNIGHFDNEIDMAWLNKNHGASKIEIKPQVDKYTI--AGKDILILAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW--KNSAAYNNDVYMLPKHLDEKVAFLHLAKLGVELEVLRDDQAAYIGVGVDGPFKPEYYRY 438          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_SPHAL (Adenosylhomocysteinase OS=Sphingopyxis alaskensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.692e-41
Identity = 88/157 (56.05%), Postives = 106/157 (67.52%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            D+I   HM  MKN AIVCNIGHFD+EI +  L  Y   K   +KPQ D   FP+    II+L++GRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW      +Y+  VYVLPKHLDEKV           LT+LT++QADYI V  +GP+KP HYRY
Sbjct:  322 DVITAEHMAAMKNMAIVCNIGHFDSEIQIAALANY---KWTEVKPQVDLVEFPDGKQ-IIILSKGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTRSE--QYQNDVYVLPKHLDEKVAALHLEKLGVKLTKLTQKQADYIGVPVEGPFKPDHYRY 472          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_MYXXD (Adenosylhomocysteinase OS=Myxococcus xanthus (strain DK 1622) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.692e-41
Identity = 93/157 (59.24%), Postives = 107/157 (68.15%), Query Frame = -2
Query:  327 IIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE-KKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 794
            +I   HM KMK+ AIVCNIGHFDNEI+V  LE Y   K   IKPQ D  +FP+ N  II+LA+GRL+NLGC TGHPS+VMS SF NQ IAQ+EL+    +  YE  KVYVLPKHLDEKV           LT L++EQADYI V   GPYKP  YRY
Sbjct:  326 VITHDHMAKMKDQAIVCNIGHFDNEIEVASLEKY---KWEEIKPQVDHIIFPD-NKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQTIAQIELYSH--SANYEVGKVYVLPKHLDEKVARLQLKKLNAQLTELSQEQADYIGVKTSGPYKPDTYRY 476          
BLAST of CX672010 vs. ExPASy Swiss-Prot
Match: SAHH_GRAFK (Adenosylhomocysteinase OS=Gramella forsetii (strain KT0803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.692e-41
Identity = 86/157 (54.78%), Postives = 108/157 (68.79%), Query Frame = -2
Query:  327 DIIMVGHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 797
            DI+   H + MK+  IV NIGHFDNEI V  L    G  ++ IKPQ D++        II+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW  K+T +Y+ +VY+LPKHLDEKV           LT L ++QA+YI V+ +GPYKP +YRY
Sbjct:  286 DIVRPEHFEAMKDKTIVANIGHFDNEIAVSWLNEKHGDSKVEIKPQVDKYTI--NGKDIILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW--KNTDEYKNEVYMLPKHLDEKVAKLHLERIGVELTELKQDQAEYIGVTVEGPYKPEYYRY 438          
The following BLAST results are available for this feature:
BLAST of CX672010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
SAHH_DESDG1.498e-4158.97Adenosylhomocysteinase OS=Desulfovibrio desulfuric... [more]
SAHH_MESSB1.956e-4157.32Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_BURXL1.956e-4159.60Adenosylhomocysteinase OS=Burkholderia xenovorans ... [more]
SAHH_STRAZ2.555e-4157.32Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_PLACH3.337e-4155.06Adenosylhomocysteinase OS=Plasmodium chabaudi GN=P... [more]
SAHH_SOLUE4.358e-4157.32Adenosylhomocysteinase OS=Solibacter usitatus (str... [more]
SAHH_FLAPJ4.358e-4154.14Adenosylhomocysteinase OS=Flavobacterium psychroph... [more]
SAHH_SPHAL5.692e-4156.05Adenosylhomocysteinase OS=Sphingopyxis alaskensis ... [more]
SAHH_MYXXD5.692e-4159.24Adenosylhomocysteinase OS=Myxococcus xanthus (stra... [more]
SAHH_GRAFK5.692e-4154.78Adenosylhomocysteinase OS=Gramella forsetii (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D11-G22-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX672010 ID=CX672010; Name=CX672010; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTTTTTTTTTTATAATCATTCATCAGTAAACAATAAGGATAACA
AGATGCAGCAAAGCAAGCAAAACTTAAAACTGCATCAAATACAACATAAT
CCAACACGGCCCCATCCAAAACCTTATTCAAATCCCAAATGGTCTTCAAT
CAACTGAAACAAATCCGTTTCTTTCCTCCAACTTTCCCACCACCCAAACA
CACACTACTACCAAATTTAAACCTAACATCCTACTACAGATCATCATTGA
AAACAATCAAGCCGGCCAAATATTTTGTTTCTTTCCCTCAAAACATTCAC
TCTTCTTCTTCTTCTTCTTCCACTTAGTACCTGTAGTGAAGAGGCTTGTA
AGGACCATCGGCGGACACACTGATGTAGTCAGCCTGCTCCTTGGTGAGCC
TGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGAAGAGCAGCAACCTTCTCA
TCGAGGTGCTTGGGCAGAACATACACCTTCTTCTCGTACTTGCCGGTGCT
CTTCTCCTTCCAGAGCTCAAGCTGGGCAATCACCTGATTGGTGAAGGAAC
AGGACATCACAAAGCTGGGGTGCCCAGTGGCACATCCCAAGTTCATGAGA
CGTCCCTCAGCCAACACGATGATGCCTGAGTTGGTCTCGGGGAAGACCCA
CCTATCAGTTTGGGGCTTGATGGTAATGCGCTTAACACCCGGGTAGGTCT
CAAGACCGAGCACATCAATTTCATTATCAAAGTGACCAATGTTGCAAACA
ATTGCATTGTTCTTCATCTTCTTCATGTGGCCAACCATGATGATGTCC
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