CX671997

Overview
NameCX671997
Unique NameCX671997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: MHCKD_DICDI (Myosin heavy chain kinase D OS=Dictyostelium discoideum GN=mhkD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.865e-13
Identity = 61/227 (26.87%), Postives = 105/227 (46.26%), Query Frame = 3
Query:   87 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARR-------------RLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA 728
            + RAH     +I   + N   + TAS D +I +W L     T   +++             +L  H+  V D+ +  +  F +S S+D +++++DL+  K  +    H K + S+  S   + + S+S D++IK+W+ L  C       DAH   ++ +R   N L     SAS D  +K WNLS  +   TL  H   +  + V+ +G L  S   D  I + D++
Sbjct:  680 SFRAHR---RSIEKMLLNEKYLFTASSDGTIKIWSLPTTTTTTTTSKQSSSSSSSSYECIGKLEDHTAEVNDMCIDIENNFLVSCSFDKQIKIYDLSTFKCIKSLNAHGKSIKSIYMS--GKYLFSSSNDQSIKIWD-LEMCMCVYGMNDAHDAPITSLRMFGNRL----FSASKDGEIKDWNLSTFQPTTTLDQHNMAITDILVTSNGYLFVS-SDDSTIRIIDIS 895          
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: GBB_DICDI (Guanine nucleotide-binding protein subunit beta OS=Dictyostelium discoideum GN=gpbA PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.865e-13
Identity = 65/244 (26.64%), Postives = 104/244 (42.62%), Query Frame = 3
Query:   24 KKNTESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSP----RRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 743
            K  T     + KM   + ++  ++ H   + A+    DN  + V+AS+D  ++VW      K + +  R     S +V     S    F   G  D    +++L   + P    R    HT   LS    +++RQIV++S D T  LW+     K T  E   H   V  V  SP+  +   +S + D T K+W+L + K   T  GH   +N V   P+G    +G  D    L+D+   + L
Sbjct:   36 KTFTRDLPGLPKMEGKIKVRRNLKGHLAKIYAMHWAEDNVHL-VSASQDGKLLVWDGLTTNKVHAIPLR-----SSWVMTCAYSPTANFVACGGLDNICSIYNLRSREQPIRVCRELNSHT-GYLSCCRFLNDRQIVTSSGDMTCILWDVENGTKIT--EFSDHNGDVMSVSVSPD--KNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRADREL 268          

HSP 2 Score: 70.8626 bits (172), Expect = 9.217e-12
Identity = 50/195 (25.64%), Postives = 86/195 (44.10%), Query Frame = 3
Query:  138 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDR-TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 719
            N   IVT+S D + I+W +       G      + H+  V  V +S D  + +SG+ D   +LWDL  GK  + F GH  D+ +V +  +     + S D + +L++   + +      D     ++ V FS        + A +D  T  VW+    +   +L GH   V+ + V  DG    +G  D ++ +W
Sbjct:  160 NDRQIVTSSGDMTCILWDVEN-----GTKITEFSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCVQTFTGHEADINAVQYFPNGLSFGTGSDDASCRLFDIRADRELMQYTHDNILCGITSVGFS---FSGRFLFAGYDDFTCNVWDTLKGERVLSLTGHGNRVSCLGVPTDGMALCTGSWDSLLKIW 346          
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: CIAO1_DROVI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila virilis GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.865e-13
Identity = 59/225 (26.22%), Postives = 105/225 (46.67%), Query Frame = 3
Query:   72 LVLKGTMRAHTDMVTAIAT-PIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG----ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL----SNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 719
            L+L+ T++ H   +  +A  P  NS    +   DK+I +W L+    T+        GH   +++V  S  G++  S S+D    +W  +  +      GH  +V SV++S     + + SRD+++ +W   G    EC   +   +AH++ V  V + P   +  + SAS+D T+K++      S+    ATL+ HT  V ++    DG    S   D  + +W
Sbjct:    4 LILEHTLQGHKGRIWGVAWHPKGNS--FASCGEDKAIRIWSLSGN--TWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAIW--SKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVL---NAHSQDVKRVVWHPT--KEVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217          
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: CIAO1_DROMO (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila mojavensis GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.865e-13
Identity = 59/225 (26.22%), Postives = 105/225 (46.67%), Query Frame = 3
Query:   72 LVLKGTMRAHTDMVTAIAT-PIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG----ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL----SNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 719
            L+L+ T++ H   +  +A  P  NS    +   DK+I +W L+    T+        GH   +++V  S  G++  S S+D    +W  +  +      GH  +V SV++S     + + SRD+++ +W   G    EC   +   +AH++ V  V + P   +  + SAS+D T+K++      S+    ATL+ HT  V ++    DG    S   D  + +W
Sbjct:    4 LILEHTLQGHKGRIWGVAWHPKGNS--FASCGEDKAIRIWSLSGN--TWTTKTILSDGHKRTIREVRWSPCGEYLASASFDATTAIW--SKHECTATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVL---NAHSQDVKRVVWHPT--KEILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDATLKIW 217          
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: CIAO1_DROWI (Probable cytosolic iron-sulfur protein assembly protein Ciao1 OS=Drosophila willistoni GN=Ciao1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.742e-13
Identity = 56/226 (24.78%), Postives = 103/226 (45.58%), Query Frame = 3
Query:   72 LVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADG--KSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG----ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL----SNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 719
            L+L+ T++ H   +  +A      +   +   DK+I +W L+    ++        GH   ++++  S  GQ+  S S+D    +W  + G  +      GH  +V SV++S     + + SRD+++ +W   G    EC   +   + HT+ V  V + P   +  + SAS+D T+K++      S+    ATL+ HT  V ++    DG    S   D  + +W
Sbjct:    4 LILEHTLQGHKGRIWGVAWH-PKGNTFASCGEDKAIRIWSLSGN--SWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATCSRDKSVWIWEVAGDDEFECAAVL---NPHTQDVKRVVWHPT--KEILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDFDADGERLVSCSDDTTLKIW 221          
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: WSB1_XENTR (WD repeat and SOCS box-containing protein 1 OS=Xenopus tropicalis GN=wsb1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.887e-13
Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 3
Query:  297 SGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQI-VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLY 746
            +G  +G +++WD+  GK     + HT+ V  + F+ D   I VSASRD+T+++W+ L +    ++    H  WV C  FSP++     V A   + V +W++    +   L GH   V     SPDG+L A+   D  + +WD   G  L+
Sbjct:  145 TGLSNGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD-LKDDGNMMKVLRGHQNWVYCCAFSPDSSMLCSVGAG--KAVFLWDMDKYTMIRKLDGHYNDVVACEFSPDGALLATASYDTRVYVWDPHIGSILF 292          

HSP 2 Score: 75.0998 bits (183), Expect = 4.887e-13
Identity = 62/218 (28.44%), Postives = 94/218 (43.12%), Query Frame = 3
Query:   99 HTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKY----------TIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLW 719
            HT++V  +    D S ++V+ASRDK++ VW L    K  G   + L GH ++V     S D     S      + LWD+      R+  GH  DV++  FS D   + +AS D  + +W+  +G   +           I  G  +  WV  V FS + +   I S + D  V+ W +             G     A S DGS+ A+G +DG    W
Sbjct:  169 HTEVVRDLTFAPDGSLILVSASRDKTLRVWDL----KDDGNMMKVLRGHQNWVYCCAFSPDSSMLCSVGAGKAVFLWDMDKYTMIRKLDGHYNDVVACEFSPDGALLATASYDTRVYVWDPHIGSILFEFGHLFPPPTPIFAGGDNGRWVKSVSFSHDGVH--IASLADDNLVRFWRIDKSYPVEVAPLSKGL--CCAFSTDGSVLAAGTQDGNAYFW 378          
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: UTP15_RAT (U3 small nucleolar RNA-associated protein 15 homolog OS=Rattus norvegicus GN=Utp15 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.887e-13
Identity = 52/157 (33.12%), Postives = 85/157 (54.14%), Query Frame = 3
Query:  279 DGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECK-YTIQEGDAHTEWVSCVRFSPNTLQPTI-VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 743
            DGQ  ++GS DG ++L+D++     R+F GHTK V +V F+ D   +VS + D T+KLW+     +  T +E   H+++V C     + L P + V+ S+D TVK+++    K       H   V +V + P G L  S G    + +WD+ +G +L
Sbjct:   91 DGQLLVAGSEDGVVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKE---HSDYVRC--GCASKLNPDLFVTGSYDHTVKMFDARTNK-NVLCVEHGQPVESVLLFPSGGLLVSAG-GRYVKVWDMLKGGQL 240          
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: NUDF_CANAL (Nuclear distribution protein PAC1 OS=Candida albicans GN=PAC1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.887e-13
Identity = 71/268 (26.49%), Postives = 109/268 (40.67%), Query Frame = 3
Query:   90 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSS-DGQFALSGSWDGELRLWDLADGKSPRRFVGHT---KDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP--------------NTLQ-PTI------------------VSASWDRTVKVW------------------NLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA 728
            ++AHT  +  I         + T S D +I +W    +EK   +  R L GH H V  +  S  D     S S D  +R+WD+  G S + FVGH+   +D+  ++       +++ S D++ +L +        +  G +H   V  V+F P              NT Q PTI                  ++AS D T+K+W                  N S   L A L GH+ +V ++ V P+G    SG  D  I  WDL+
Sbjct:  162 IKAHTRAINKICFTYKKPYYLATCSSDLTIKIW----DEKFNHI--RTLNGHEHTVSSIQFSPVDNSILYSVSRDKNIRVWDIFQGISLKSFVGHSEWCRDLDIISSDTYGDFVLTCSNDQSARLSHANSGAGVAMIVGHSHV--VETVKFLPSLQANKILDEYITKNTEQFPTIPLELLKDKTYNQLGFKYCITASRDNTIKLWLIPPPTIAPHRPPLPSKYNNSQSWLIAELKGHSSWVKSLCVHPNGKFIISGSDDKTIKFWDLS 421          
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: CDC4_CANAL (Cell division control protein 4 OS=Candida albicans GN=CDC4 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.887e-13
Identity = 60/212 (28.30%), Postives = 97/212 (45.75%), Query Frame = 3
Query:  147 MIVTASRDKSIIVWHLT--------------KEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAD-GKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 734
            +++T SRD +I VW L               + +  Y +A   L+GH+  V+ +  S  G   +SGS+D  +R+WDL D G       GH   V S A    ++   S S D  I +WN   GE K  +     H   V  +    + +   +VSA+ D T+++W+    +LR+ L GH   +       DG L    G + ++ LW++ +G
Sbjct:  435 LLITGSRDHNIHVWKLPVVDDSQDYIETFEGEFDNPYLIAV--LSGHTQSVRSI--SGYGNIIISGSYDSTVRVWDLLDDGHCTHVLQGHLDRVYSTAIDFHSKTCFSGSMDSNINVWNFETGELKKVLV---GHASLVGLL----DLVDDVLVSAAADATLRIWDAKTGELRSKLKGHGAAI--TCFEHDG-LRVVSGSEKMLKLWNVEKG 632          
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: A16L1_HUMAN (Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.887e-13
Identity = 66/253 (26.09%), Postives = 108/253 (42.69%), Query Frame = 3
Query:   96 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWV---SCV---------RF---------------------SPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYV-----NTVAVSPDGSLCASGGKDGVILLWDLAEGK 737
            AH   V A+      S ++ T   D+ + +W +  E+  +   +  L+G +  +  +   S G + L+ S D   R+W + D +      GH+  VLS  F +DN +IVS S DRT+KLW+   + C  T+  G +  + V    CV         RF                       N  +  ++S S D  +KV +L    ++ T +   G+        V  SPDGS  A+G  +G + +W +  GK
Sbjct:  320 AHDGEVNAVQFS-PGSRLLATGGMDRRVKLWEVFGEKCEF---KGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSA-PGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGK 567          
The following BLAST results are available for this feature:
BLAST of CX671997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 414
Match NameE-valueIdentityDescription
MHCKD_DICDI2.865e-1326.87Myosin heavy chain kinase D OS=Dictyostelium disco... [more]
GBB_DICDI2.865e-1326.64Guanine nucleotide-binding protein subunit beta OS... [more]
CIAO1_DROVI2.865e-1326.22Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROMO2.865e-1326.22Probable cytosolic iron-sulfur protein assembly pr... [more]
CIAO1_DROWI3.742e-1324.78Probable cytosolic iron-sulfur protein assembly pr... [more]
WSB1_XENTR4.887e-1331.13WD repeat and SOCS box-containing protein 1 OS=Xen... [more]
UTP15_RAT4.887e-1333.12U3 small nucleolar RNA-associated protein 15 homol... [more]
NUDF_CANAL4.887e-1326.49Nuclear distribution protein PAC1 OS=Candida albic... [more]
CDC4_CANAL4.887e-1328.30Cell division control protein 4 OS=Candida albican... [more]
A16L1_HUMAN4.887e-1326.09Autophagy-related protein 16-1 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D04-G8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671997 ID=CX671997; Name=CX671997; organism=Citrus sinensis; type=EST; length=785bp
CAAACCCTAACAGCAGGGGGGAAAAAAAAAATACCGAAAGTACATTTGCT
ATCGGAAAAATGGCTGAAGGTCTCGTTCTCAAAGGAACCATGCGCGCCCA
CACCGACATGGTAACGGCGATCGCCACCCCAATCGACAACTCTGACATGA
TCGTGACGGCCTCGCGTGACAAGTCCATCATTGTCTGGCACCTCACTAAG
GAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTTTGACCGGCCACTCTCA
CTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGCCAGTTCGCTCTCTCCG
GCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTTGGCCGATGGCAAATCC
CCCCGCAGGTTCGTCGGCCACACTAAGGACGTTCTCTCCGTCGCCTTCTC
GATCGACAACCGTCAGATTGTATCGGCCTCTCGTGACCGTACGATCAAGT
TGTGGAACACGCTCGGCGAGTGCAAGTACACGATTCAAGAGGGAGACGCT
CACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACGCTTCAGCC
CACTATCGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTGGAATTTGA
GCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGATACGTGAAC
ACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGAGGGAAAGA
TGGTGTGATTCTGTTGTGGGATTTGGCTGAGGGAAAAAGACTCTACTCGC
TCGACGCTGGTGCTGTCATTCACGCGCTCTGCTTC
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