CX671997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: WDR48_BRUMA (WD repeat-containing protein 48 homolog OS=Brugia malayi GN=Bm1_41555 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.803e-11 Identity = 44/168 (26.19%), Postives = 74/168 (44.05%), Query Frame = 3 Query: 243 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWV-----SCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAE 731 H+ +V D+VL +S S D +++W+ G H V ++A++ D + S D+ I LW+ K T T + S + N ++S S ++ ++V++ C+ L GHT V V V+ DG+ C S DG I LW + + Sbjct: 85 HTDWVNDIVLCCG---VISASSDTTVKVWNAQKGFCMSTLRTHRDYVRALAYARDVEMVASGGFDQLIYLWDIATLTKLTALNNTVTTSSLTGNKDSIYSLATNPSGTVVISGSTEKVLRVFDPRACQKLMKLRGHTDNVKAVVVNRDGTQCISASSDGTIKLWSIGQ 249
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: WDR16_MACFA (WD repeat-containing protein 16 OS=Macaca fascicularis GN=WDR16 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.803e-11 Identity = 50/216 (23.15%), Postives = 94/216 (43.52%), Query Frame = 3 Query: 99 HTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLA--DGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGH-TGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 737 H + V I P +++ T ++ K I VWH + + H V + +SD + +SG +GE+R+W + K H V + +N + V+AS D T +W+ + + + CV + P Q I+++ DR + W + + + L G +G +N + ++ +G +GG D ++ +WD EG+ Sbjct: 331 HFEAVEDIVFPFGTAELFATCAK-KDIRVWHTSSN-----------SAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIWDLV---RLRRNQMILANTLFQCVCYHPEEFQ--IITSGTDRKIAYWEVFDGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVWDYNEGE 529
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: PFS2_KLULA (Polyadenylation factor subunit 2 OS=Kluyveromyces lactis GN=PFS2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.803e-11 Identity = 45/162 (27.78%), Postives = 70/162 (43.21%), Query Frame = 3 Query: 249 HFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 734 H + + + +G+ + +++GE LW + H V + +S +VS S D +K+W + + AH E V + FSP + VS S D +K+WN SN + L+GH V + P L SG KD +I WD G Sbjct: 82 HVIPALTWTPEGRRLVVATYNGEFSLWSGSSFNFESIMQAHDSAVTVMTYSHTGDWMVSGSADGELKIWQPNFNMVKVMDQ--AHMECVREISFSPTDQK--FVSCSDDNVLKIWNFSNGQQERVLSGHHWDVKSCDWHPKMGLIVSGSKDNLIKFWDPRSG 239
BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: COPA_SCHPO (Putative coatomer subunit alpha OS=Schizosaccharomyces pombe GN=SPBPJ4664.04 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.803e-11 Identity = 42/145 (28.97%), Postives = 65/145 (44.83%), Query Frame = 3 Query: 294 LSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA 728 L+ +G ++LWD G RF GH V +AF VS D + +WN + + + H ++V F P I+S S D+T+++WN + A L GH+ YV A P L S D + +WD++ Sbjct: 27 LTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNY--KSRKLLFSLCGHMDYVRVCTFHHE--YPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDIS 167 The following BLAST results are available for this feature:
BLAST of CX671997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671997 ID=CX671997; Name=CX671997; organism=Citrus sinensis; type=EST; length=785bpback to top |