CX671997 | Citrus Genome Database

Overview


Name	CX671997
Unique Name	CX671997
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	785

Libraries


Library Name	Type
Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.712e-24
Identity = 68/210 (32.38%), Postives = 106/210 (50.48%), Query Frame = 3

Query:   96 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 725
            AH   V+++     +  ++ T   D  + +W + K           LTGH+  V+ V L++  +  ++GS  G +R+WDL   K  R  +GH  ++ S+ F      + S S+D  IKLW+     K  +     H++ V C+RFSP+     + SA+ D TVK+W+L+  K+ +   GHTG VN V   P+  L ASG  D  I  WDL
Sbjct:   18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMS-----LTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218

HSP 2 Score: 97.0561 bits (240), Expect = 1.201e-19
Identity = 67/210 (31.90%), Postives = 106/210 (50.48%), Query Frame = 3

Query:   87 TMRAHTDMVTAIA--TPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 707
            ++  HT  V ++   TP    ++IV  S+  SI VW L   +       R L GH   +  +     G+F  SGS D  ++LWD+       R+ GH++ V  + FS D + + SA+ D T+KLW+ T G+    + E   HT  V+ V F PN  +  + S S DRT++ W+L   ++ + + G  G V +V  +PDG    SG +D +
Sbjct:   58 SLTGHTSPVESVRLNTP---EELIVAGSQSGSIRVWDLEAAK-----ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM---MSEFPGHTGPVNVVEFHPN--EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSL 254

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BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: TUP1_DICDI (General transcriptional corepressor tupA OS=Dictyostelium discoideum GN=tupA PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.154e-24
Identity = 70/209 (33.49%), Postives = 108/209 (51.67%), Query Frame = 3

Query:  138 NSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSP----RRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK----LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 734
            + + + T + DK++ VW  H  K + T+        GH   +  +  SSDG+F +SGS D + ++WD+  GK         VG    V SVA S D R + + S D  ++LW+   +  Y ++  + H + V  V FSP+    ++ S S D+++K+W+LS  +     RAT  GH  +V +VA SPDGS   SG KD  +  WD   G
Sbjct:  338 DGNYLATGAEDKTVKVWDIHTKKIQHTF-------YGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDA--QTGYFLERYEGHLDSVYSVAFSPDG--KSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNG 535

HSP 2 Score: 100.523 bits (249), Expect = 1.086e-20
Identity = 66/198 (33.33%), Postives = 100/198 (50.51%), Query Frame = 3

Query:  150 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-----ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS---LCASGGKDGVILLW 719
            IV+ S DK   +W + K +  + +    + G  + V  V +S DG+   +GS D  +RLWD   G    R+ GH   V SVAFS D + + S S D+++KLW+  G      C+ T    + H ++V  V FSP+     ++S S DR+V+ W+  N      L GH   V +VA+SP  +   + A+G  D    LW
Sbjct:  384 IVSGSGDKKAKIWDIEKGKCAFTLGNEEV-GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATF---NGHKDFVLSVAFSPD--GSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575

[Close]

BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.037e-24
Identity = 68/210 (32.38%), Postives = 105/210 (50.00%), Query Frame = 3

Query:   96 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 725
            AH+  V+++        ++ T   D  + VW + K           LTGH+  ++ + +S+  +  ++GS  G +R+WDL   K  R  +GH  ++ S+ F      + S S D  IKLW+     K  I +  +HT+ V C+RFSP+     + SA+ D TVK+W+L+  K+     GH+G VN V   P   L ASG  D  I  WDL
Sbjct:   18 AHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMS-----LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV--RRKGCIFKYKSHTQAVRCLRFSPD--GKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218

HSP 2 Score: 82.8037 bits (203), Expect = 2.344e-15
Identity = 59/206 (28.64%), Postives = 98/206 (47.57%), Query Frame = 3

Query:  111 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 707
            +T   TPI++       ++IV  S+  SI VW L   +       R L GH   +  +     G F  SGS D +++LWD+       ++  HT+ V  + FS D + + SA+ D T+KLW+ T G+  +   E   H+  V+ V F P+  +  + S S DRT++ W+L    + + +      V  +  +PDG     G +D +
Sbjct:   59 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAK-----ILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMF---EFTGHSGPVNVVEFHPS--EYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSL 254

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BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.209e-23
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 3

Query:   96 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 725
            AH   V+++     +  ++ T   D  + +W + K           LTGH+  V+ V  ++  +  ++GS  G LR+WDL   K  R  +GH  +V S+ F      + S S D  IKLW+     K  +     HT+ V C+RFSP+     + SAS D +VK+W+L+  K+ A L+ H G VN +   P+  L ASG  D  +  WDL
Sbjct:   18 AHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMS-----LTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDV--RRKGCVFRYKGHTQAVRCLRFSPDG--KWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDL 218

HSP 2 Score: 95.1301 bits (235), Expect = 4.564e-19
Identity = 65/206 (31.55%), Postives = 99/206 (48.06%), Query Frame = 3

Query:  111 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 707
            +T   TP+++       ++IV  S+  S+ +W L   +       R L GH   V  +     G+F  SGS D  ++LWD+       R+ GHT+ V  + FS D + + SAS D ++KLW+ T G+    + E   H   V+ + F PN  +  + S S DRTV+ W+L   +L     G T  V  +  S DG     GGKD +
Sbjct:   59 LTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAK-----ILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDGGCIFCGGKDSL 254

HSP 3 Score: 73.559 bits (179), Expect = 1.422e-12
Identity = 51/176 (28.98%), Postives = 76/176 (43.18%), Query Frame = 3

Query:  228 RRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 752
            + +  H   V  VVL  S G+   +G  D  + LW +          GHT  V SV F+     IV+ S+  ++++W+   E    ++    H   VS + F P      + S S D  +K+W++          GHT  V  +  SPDG   AS   D  + LWDL  GK +  L
Sbjct:   14 QEIVAHGCSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDL--EAAKILRTLMGHKANVSSLDFHP--YGEFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAEL 185

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BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.804e-23
Identity = 61/174 (35.06%), Postives = 97/174 (55.75%), Query Frame = 3

Query:  234 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 752
            L GH+  V  V  S +G++  S S D  +++W   DGK  +   GH   +  VA+S D+R +VS S D+T+K+W  + G+   T++    H+ +V C  F+P +    IVS S+D +V++W++   K   TL  H+  V+ V  + DGSL  S   DG+  +WD A G+ L +L
Sbjct:   68 LAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLK---GHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236

HSP 2 Score: 107.457 bits (267), Expect = 8.886e-23
Identity = 80/256 (31.25%), Postives = 130/256 (50.78%), Query Frame = 3

Query:    6 PNSRGEKKNTESTFAIGKMAEGL------VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVW--HLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK-LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 743
            PNS G+   T S+ +       L       LK T+  HT  V+A+     N + + ++S DK I +W  +  K EKT       ++GH   + DV  SSD +  +SGS D  L++W+L+ GKS +   GH+  V    F+  +  IVS S D ++++W+   G+C  T+    AH++ VS V F  N     IVS+S+D   ++W+ ++ + L+  +      V+ V  SP+G    +   D  + LWD ++GK L
Sbjct:   34 PNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKT-------ISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTL---PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 276

HSP 3 Score: 89.7373 bits (221), Expect = 1.917e-17
Identity = 71/232 (30.60%), Postives = 114/232 (49.14%), Query Frame = 3

Query:   36 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLS-VAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 719
            + T  + +++ G  LK T++ H++ V         S++IV+ S D+S+ +W +       G   + L  HS  V  V  + DG   +S S+DG  R+WD A G+  +  +      +S V FS + + I++A+ D T+KLW+ + G+C  T   G  + ++     FS  T    IVS S D  V +WNL + ++   L GHT  V   A  P  ++ AS     D  I LW
Sbjct:  135 DKTLKVWELSTGKSLK-TLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVRT-----GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSV-TGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357

HSP 4 Score: 78.1814 bits (191), Expect = 5.773e-14
Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = 3

Query:  366 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 758
            GHTK V +V FS +   + S+S D+ IK+W    G+ + TI     H   +S V +S ++    +VS S D+T+KVW LS  K   TL GH+ YV     +P  +L  SG  D  + +WD+  GK L +L A
Sbjct:   70 GHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKLGISDVAWSSDSR--LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPA 196

[Close]

BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.804e-23
Identity = 68/210 (32.38%), Postives = 104/210 (49.52%), Query Frame = 3

Query:   96 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 725
            AH   V+++     +  ++ T   D  + +W + K           LTGH+  V+ V  ++  +  ++GS  G LR+WDL   K  R  +GH  +V S+ F      + S S D  IKLW+     K  +     HT+ V C+RFSP+     + SAS D +VK+W+L+  K+ A L+ H G VN +   P+  L ASG  D  +  WDL
Sbjct:   18 AHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMS-----LTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDV--RRKGCVFRYKGHTQAVRCLRFSPDG--KWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDL 218

HSP 2 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = 3

Query:  111 VTAIATPIDN------SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 707
            +T   TP+++       ++IV  S+  S+ VW L   +       R L GH   V  +     G F  SGS D  ++LWD+       R+ GHT+ V  + FS D + + SAS D ++KLW+ T G+    + E   H   V+ + F PN  +  + S S DRTV+ W+L   +L     G T  V  +  S DG     GG+D +
Sbjct:   59 LTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDLEAAK-----ILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSE---HKGPVNIIEFHPN--EYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDGGCIFCGGRDAL 254

HSP 3 Score: 71.2478 bits (173), Expect = 7.057e-12
Identity = 50/176 (28.41%), Postives = 75/176 (42.61%), Query Frame = 3

Query:  228 RRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 752
            + +  H   V  VVL  S G+   +G  D  + LW +          GHT  V SV F+     IV+ S+  ++++W+   E    ++    H   V  + F P      + S S D  +K+W++          GHT  V  +  SPDG   AS   D  + LWDL  GK +  L
Sbjct:   14 QEIVAHGSSVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEELIVAGSQSGSLRVWDL--EAAKILRTLMGHKANVCSLDFHP--YGDFVASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAEL 185

[Close]

BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.516e-22
Identity = 68/210 (32.38%), Postives = 100/210 (47.62%), Query Frame = 3

Query:   96 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 725
            AH+  V+++     +  ++ T   D  + +W ++K           LTGH+  V  +  +S  +  ++GS  G LRLWDL   K  R  +GH   + S+ F      + S S D  IKLW+     K  +     HT+ V C+ FSP+     + SAS D TVK+W+L   K+      HT  VN V   P+  L ASG  D  + LWDL
Sbjct:   18 AHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMS-----LTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV--RRKGCVFRYKGHTQAVRCLAFSPDG--KWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218

HSP 2 Score: 104.375 bits (259), Expect = 7.522e-22
Identity = 67/205 (32.68%), Postives = 103/205 (50.24%), Query Frame = 3

Query:   87 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKD 701
            ++  HT  V  I     + + +V  S   S+ +W L   +       R L GH   +  +     G++  SGS D  ++LWD+       R+ GHT+ V  +AFS D + + SAS D T+KLW+ +      I E  +HT  V+ V+F PN  +  + S S DRTVK+W+L    +  +  G TG V +V  +PDGS   SG ++
Sbjct:   58 SLTGHTSAVGCIQFN-SSEERVVAGSLSGSLRLWDLEAAK-----ILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLI--AGKMITEFTSHTSAVNVVQFHPN--EYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN 252

HSP 3 Score: 74.7146 bits (182), Expect = 6.383e-13
Identity = 47/173 (27.17%), Postives = 78/173 (45.09%), Query Frame = 3

Query:  228 RRLTGHSHFVQDVVLS-SDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 743
            + +  HS  V  +VL  S G+   +G  D  + +W ++         GHT  V  + F+    ++V+ S   +++LW+   E    ++    H   +S + F P  +   + S S D  +K+W++          GHT  V  +A SPDG   AS   D  + LWDL  GK +
Sbjct:   14 QEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDL--EAAKILRTLMGHKASISSLDFHP--MGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI 182

[Close]

BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: WDR5_DICDI (WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum GN=wdr5 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.377e-22
Identity = 57/178 (32.02%), Postives = 96/178 (53.93%), Query Frame = 3

Query:  219 VARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL 752
            + +  L GH   +  V  S DG++  S S D  +++W   DGK  R   GH + +  +A+S D++ I SAS D+TIK+W+   E    ++    H E+V  V F+P +    IVS S+D  V++W+++  +    ++ H+  V  V  + DG+L  SG  DG + +WD   G+ L ++
Sbjct:   37 ILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDV--ESGKMVKTLKGHKEYVFGVSFNPQS--NLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTI 210

HSP 2 Score: 104.76 bits (260), Expect = 5.760e-22
Identity = 67/224 (29.91%), Postives = 111/224 (49.55%), Query Frame = 3

Query:   75 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTG-YVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR 740
            +LK T++ H   ++++    D    + +AS DK+I +W         G   R L GH   + D+  S D +   S S D  +++WD+  GK  +   GH + V  V+F+  +  IVS S D  +++W+   GEC   I    AH++ V+ V F  N     +VS S+D TV++W+ +  +L  T++   G  V+ V  SP+G    +G  D  + LW     K+
Sbjct:   37 ILKYTLKGHLKSISSVKFSPDGK-WLASASADKTIKIWGAYD-----GKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMI---SAHSDPVTGVHF--NRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKK 249

HSP 3 Score: 92.8189 bits (229), Expect = 2.265e-18
Identity = 75/258 (29.07%), Postives = 113/258 (43.80%), Query Frame = 3

Query:   87 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPN-------TLQPT-------------------------------------IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLW 719
            T+  H + ++ IA   D S +I +AS DK+I +W +       G   + L GH  +V  V  +      +SGS+D  +R+WD+  G+  +    H+  V  V F+ D   +VS S D T+++W+T  G+   TI   D     VS V+FSPN       TL  T                                     IV+ S D  + ++NL   ++  TLAGH   V TVA  P  ++ ASG   KD  + +W
Sbjct:   83 TLEGHKEGISDIAWSQD-SKLICSASDDKTIKIWDVES-----GKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKE--VSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332

[Close]

BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: LIS1_XENTR (Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 3.377e-22
Identity = 73/222 (32.88%), Postives = 105/222 (47.30%), Query Frame = 3

Query:  147 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD--------------------GSLCASGGKDGVILLWDLAEGKRLYSL 752
            ++VTAS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+                    G    SG +D  I +WD++ G  L +L
Sbjct:  122 VMVTASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTL 334

HSP 2 Score: 99.3673 bits (246), Expect = 2.420e-20
Identity = 69/244 (28.28%), Postives = 112/244 (45.90%), Query Frame = 3

Query:   87 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTI------------------VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 758
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +   TI                  +S S D+T+K+W++S      TL GH  +V  V   P G    S   D  I +WD    + + +L+A
Sbjct:  145 TLKGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNA 378

HSP 3 Score: 87.0409 bits (214), Expect = 1.243e-16
Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 3

Query:  234 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA 728
            L+GH   V  V+        ++ S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS   D  + +W +A
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

HSP 4 Score: 87.0409 bits (214), Expect = 1.243e-16
Identity = 63/233 (27.04%), Postives = 108/233 (46.35%), Query Frame = 3

Query:   87 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 722
            TM  H   V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  +       H   V  ++++ ++                      ++S SRD+TIK+W+ ++G C  T+     H  WV  V+F P      I+S + D+T+++W+  N +   TL  H  +V ++          +G  D  + +W+
Sbjct:  187 TMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLV---GHDNWVRGVQFHPGG--KFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408

HSP 5 Score: 70.8626 bits (172), Expect = 9.217e-12
Identity = 54/207 (26.09%), Postives = 96/207 (46.38%), Query Frame = 3

Query:   36 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 593
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+TI++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

[Close]

BLAST of CX671997 vs. ExPASy Swiss-Prot
Match: LIS1B_XENLA (Lissencephaly-1 homolog B OS=Xenopus laevis GN=pafah1b1-B PE=2 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 3.377e-22
Identity = 73/222 (32.88%), Postives = 105/222 (47.30%), Query Frame = 3

Query:  147 MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD--------------------GSLCASGGKDGVILLWDLAEGKRLYSL 752
            ++VTAS D +I VW     +   G   R L GH+  VQD+     G+   S S D  ++LWD    +  R   GH  +V SVA   +   IVSASRD+TIK+W    +  Y ++    H EWV  VR  PN     I S S D+TV+VW ++  + +A L  H   V  ++ +P+                    G    SG +D  I +WD++ G  L +L
Sbjct:  122 VMVTASEDATIKVW-----DYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV--QTGYCVKTFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTL 334

HSP 2 Score: 99.7525 bits (247), Expect = 1.853e-20
Identity = 69/244 (28.28%), Postives = 112/244 (45.90%), Query Frame = 3

Query:   87 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTI------------------VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA 758
            T++ HTD V  I+   D+S  ++ + S D +I +W     E       R + GH H V  V +  +G   +S S D  +++W++  G   + F GH + V  V  + D   I S S D+T+++W     ECK  ++E   H   V C+ ++P +   TI                  +S S D+T+K+W++S      TL GH  +V  V   P G    S   D  I +WD    + + +L+A
Sbjct:  145 TLKGHTDSVQDIS--FDHSGKLLASCSADMTIKLWDFQGFE-----CLRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNA 378

HSP 3 Score: 87.4261 bits (215), Expect = 9.516e-17
Identity = 56/166 (33.73%), Postives = 79/166 (47.59%), Query Frame = 3

Query:  234 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA 728
            L+GH   V  V+        ++ S D  +++WD   G   R   GHT  V  ++F    + + S S D TIKLW+  G EC  T+     H   VS V   PN     IVSAS D+T+K+W +       T  GH  +V  V  + DG+L AS   D  + +W +A
Sbjct:  104 LSGHRSPVTRVIFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECLRTMH---GHDHNVSSVAIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264

HSP 4 Score: 87.4261 bits (215), Expect = 9.516e-17
Identity = 64/240 (26.67%), Postives = 110/240 (45.83%), Query Frame = 3

Query:   66 EGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQ--------------------IVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 722
            +G     TM  H   V+++A  + N D IV+ASRDK+I +W     E   G   +  TGH  +V+ V  + DG    S S D  +R+W +A  +       H   V  ++++ ++                      ++S SRD+TIK+W+ ++G C  T+     H  WV  V+F P      I+S + D+T+++W+  N +   TL  H  +V ++          +G  D  + +W+
Sbjct:  180 QGFECLRTMHGHDHNVSSVAI-MPNGDHIVSASRDKTIKMW-----EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLV---GHDNWVRGVQFHPGG--KFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408

HSP 5 Score: 70.8626 bits (172), Expect = 9.217e-12
Identity = 54/207 (26.09%), Postives = 96/207 (46.38%), Query Frame = 3

Query:   36 ESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------------------GQFALSGSWDGELRLWDLADGKSPRRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 593
            + T  + ++  G  +K T   H + V  +  P  +  +I + S D+++ VW +  +E      +  L  H H V+ +  + +                    G F LSGS D  +++WD++ G      VGH   V  V F    + I+S + D+TI++W+   + C  T+   +AH  +V+ + F  +   P +V+ S D+TVKVW
Sbjct:  213 DKTIKMWEVQTGYCVK-TFTGHREWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKE-----CKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTL---NAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVW 407

The following BLAST results are available for this feature:

BLAST of CX671997 vs. ExPASy Swiss-Prot

BLAST of CX671997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 414


Match Name	E-value	Identity	Description
KTNB1_HUMAN	4.712e-24	32.38	Katanin p80 WD40-containing subunit B1 OS=Homo sap...	[more]
TUP1_DICDI	6.154e-24	33.49	General transcriptional corepressor tupA OS=Dictyo...	[more]
KTNB1_CHICK	8.037e-24	32.38	Katanin p80 WD40-containing subunit B1 OS=Gallus g...	[more]
KTNB1_XENLA	5.209e-23	32.38	Katanin p80 WD40-containing subunit B1 OS=Xenopus ...	[more]
WDS_DROME	6.804e-23	35.06	Protein will die slowly OS=Drosophila melanogaster...	[more]
KTNB1_XENTR	6.804e-23	32.38	Katanin p80 WD40-containing subunit B1 OS=Xenopus ...	[more]
KTNB1_DANRE	1.516e-22	32.38	Katanin p80 WD40-containing subunit B1 OS=Danio re...	[more]
WDR5_DICDI	3.377e-22	32.02	WD repeat-containing protein 5 homolog OS=Dictyost...	[more]
LIS1_XENTR	3.377e-22	32.88	Lissencephaly-1 homolog OS=Xenopus tropicalis GN=p...	[more]
LIS1B_XENLA	3.377e-22	32.88	Lissencephaly-1 homolog B OS=Xenopus laevis GN=paf...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS10_14D04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D04-G8-5.g, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX671997 ID=CX671997; Name=CX671997; organism=Citrus sinensis; type=EST; length=785bp
CAAACCCTAACAGCAGGGGGGAAAAAAAAAATACCGAAAGTACATTTGCT
ATCGGAAAAATGGCTGAAGGTCTCGTTCTCAAAGGAACCATGCGCGCCCA
CACCGACATGGTAACGGCGATCGCCACCCCAATCGACAACTCTGACATGA
TCGTGACGGCCTCGCGTGACAAGTCCATCATTGTCTGGCACCTCACTAAG
GAGGAAAAGACCTACGGCGTTGCGCGCCGTCGTTTGACCGGCCACTCTCA
CTTCGTGCAGGACGTCGTCCTCTCCTCGGACGGCCAGTTCGCTCTCTCCG
GCTCCTGGGACGGCGAGCTCCGCCTCTGGGATTTGGCCGATGGCAAATCC
CCCCGCAGGTTCGTCGGCCACACTAAGGACGTTCTCTCCGTCGCCTTCTC
GATCGACAACCGTCAGATTGTATCGGCCTCTCGTGACCGTACGATCAAGT
TGTGGAACACGCTCGGCGAGTGCAAGTACACGATTCAAGAGGGAGACGCT
CACACTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACGCTTCAGCC
CACTATCGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTGGAATTTGA
GCAACTGCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGATACGTGAAC
ACCGTCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGAGGGAAAGA
TGGTGTGATTCTGTTGTGGGATTTGGCTGAGGGAAAAAGACTCTACTCGC
TCGACGCTGGTGCTGTCATTCACGCGCTCTGCTTC