CX671993

Overview
NameCX671993
Unique NameCX671993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length477
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.593e-22
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = -3
Query:    2 PLPFRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFY------SLKLDGELGPATSLI 472
            P P  +    +S ++K L   +L+ +++ L +D + +++  +        NYYPPC QPE  +G   H D   +T+LLQ ++M GLQ+     WV V P P + VVNIGD L++L+N  Y S+EHRA  N+V  R+S+  F+      S KL    GP T L+
Sbjct:  169 PTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQ-DDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKL---YGPITELL 327          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.080e-22
Identity = 56/134 (41.79%), Postives = 82/134 (61.19%), Query Frame = -3
Query:   50 YSTEIKNLTLKILDQMAKALRMDPNDMEEL---FENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATF 442
            Y+  ++ L  K+   ++  L ++P+ +E+     E  +   ++NYYP C QPE  +G  +H D SALT +L  N + GLQ+  +GKWV  K +PD+ V++IGD LEIL+NG Y SI HR  VN  K R+S A F
Sbjct:  172 YAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF 304          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.080e-22
Identity = 55/143 (38.46%), Postives = 87/143 (60.84%), Query Frame = -3
Query:   50 PLPFRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDG--KWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATF 472
            P  +R   EVYS ++  L  K+L+ +++A+ ++  D+ +   +  Q   +NYYP C QP+  +G   H D   +T+LLQ + + GLQ  +DG   W+ V+P+  AFVVN+GD    L+NG + + +H+A VNS   RLS+ATF
Sbjct:  151 PEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQ-DMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATF 292          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 2.716e-22
Identity = 56/135 (41.48%), Postives = 84/135 (62.22%), Query Frame = -3
Query:   50 YSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAF----RMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATF 442
            YS ++++L  KIL  ++  L ++   +E+    GM+      ++NYYP C QPE  +G  +H D SALT +L  N + GLQ+  +GKWV  K +P++ +++IGD +EIL+NG Y SI HR  VN  K R+S A F
Sbjct:  178 YSVKLRSLATKILSVLSLGLGLEEGRLEKEV-GGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILH-NMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVF 310          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 3.548e-22
Identity = 54/152 (35.53%), Postives = 89/152 (58.55%), Query Frame = -3
Query:    5 RDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSL 460
            RD    YS  ++NL L + + +++AL + PN +EE+          +YYP C QPE   G + H D+  LT+L+Q +++ GLQI  + +W+ V  +P A V+NI D+L+++TN  + S+EHR   N V  R+S+A  + +K   + G +  L
Sbjct:  205 RDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQ-DQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKVGPRISVAVAFGIKTQTQEGVSPRL 355          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.548e-22
Identity = 52/152 (34.21%), Postives = 91/152 (59.87%), Query Frame = -3
Query:    2 YSTEIKNLTLKILDQMAKALRMDPNDMEELFEN---GMQAF--RMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 442
            ++ +++ L  ++LD + + L ++   ++  F     G+  F  +++ YPPC +PE   G  +H DA  L +L Q + + GLQ+ KDG+WV V P+  + V+N+GD +E++TNG Y S+ HR    +   R+SLA+FY+   D  + PA +L+
Sbjct:  116 FAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALV 267          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.548e-22
Identity = 51/152 (33.55%), Postives = 91/152 (59.87%), Query Frame = -3
Query:    2 YSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAF--RMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 442
            ++  ++ L  ++LD + + L ++   ++ +F    +G+  F  +++ YPPC +PE + G  +H DA  + +L Q + + GLQ+ KD +W+ V P+  + VVNIGD LE++TNG Y S+ HR    +   R+S+A+FY+   D  + PA  L+
Sbjct:  113 FALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQTNGNRMSIASFYNPGSDAVIFPAPELV 264          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.548e-22
Identity = 50/157 (31.85%), Postives = 93/157 (59.24%), Query Frame = -3
Query:    2 FRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ---AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 463
            +R+    ++  ++ L  ++LD + + L ++   +++ F          +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KDG+W+ V P+  + VVN+GD LE++TNG Y S+ HR    +   R+SLA+FY+   D  + PA +L+
Sbjct:  110 YREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLV 266          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 3.548e-22
Identity = 52/151 (34.44%), Postives = 92/151 (60.93%), Query Frame = -3
Query:    2 YSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ---AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRA-TVNSVKERLSLATFYSLKLDGELGPATSLI 442
            ++ +++NL  ++LD + + L ++   +++ F          +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KDG W+ V P+  A VVN+GD LE++TNG Y S+ HR  T  S   R+S+A+FY+   D  + PA +L+
Sbjct:  117 FAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHAIVVNLGDQLEVITNGRYKSVMHRVLTQTSGTGRMSIASFYNPGSDAVIYPAPALV 267          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 4.633e-22
Identity = 50/157 (31.85%), Postives = 95/157 (60.51%), Query Frame = -3
Query:    2 FRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 463
            +R+    ++  ++ L  ++LD + + L ++   ++++F   +      +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KDG+W+ V P+  + VVN+GD LE++TNG Y S+ HR    +   R+SLA+FY+   D  + PA +L+
Sbjct:  110 YREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLV 266          
The following BLAST results are available for this feature:
BLAST of CX671993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCH3_SOLLC1.593e-2236.811-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
LDOX_ARATH2.080e-2241.79Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
FNSI_PETCR2.080e-2238.46Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
LDOX_VITVI2.716e-2241.48Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
DV4H_CATRO3.548e-2235.53Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCO_PERAE3.548e-2234.211-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_DENCR3.548e-2233.551-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
ACCO3_PETHY3.548e-2231.851-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_CUCME3.548e-2234.441-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCO_TOBAC4.633e-2231.851-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_14D02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D02-G4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671993 ID=CX671993; Name=CX671993; organism=Citrus sinensis; type=EST; length=477bp
CAATAAGACTTGTTGCCGGACCCAATTCTCCATCTAATTTTAGGCTGTAA
AATGTAGCTAAAGATAATCTTTCCTTCACTGAGTTTACAGTTGCGCGATG
TTCAATACTAGGATAAGTTCCATTGGTTAATATCTCTAAAACGTCACCAA
TGTTGACTACAAAGGCATCCGGAAGGGGTTTAACAGCAACCCATTTTCCA
TCTTTCTTAATTTGGAGACCATCCATCTCATTGATTTGGAGGAGGACGGT
GAGTGCGGAGGCATCACAATGAGAATTATGGCCGACAACTTTTTCTGGTT
GCAGACAAGGAGGATAATAATTCATCCTGAATGCTTGCATCCCGTTTTCA
AACAACTCTTCCATATCATTGGGATCCATTCTTAGAGCTTTAGCCATTTG
GTCAAGGATTTTCAGGGTAAGATTTTTAATTTCTGTTGAGTAAACTTCCC
AGTCATCTCTGAATGGAAGAGGCAACT
back to top