CX671993

Overview
NameCX671993
Unique NameCX671993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length477
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.811e-19
Identity = 51/146 (34.93%), Postives = 91/146 (62.33%), Query Frame = -3
Query:   47 LPLPFRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRM--NYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN-SVKERLSLATFY 475
            LP   RD    YS ++  L   + + +++AL ++PN ++++    ++  RM  +Y+PPC +P+   G + H D S LTVLL  N ++GLQ+ ++G W  V  +P A ++NIGD+L+++TN  + S++HR   N + + R+S+A F+
Sbjct:  173 LPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDM--ECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDN-IEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFF 315          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.671e-19
Identity = 53/137 (38.69%), Postives = 85/137 (62.04%), Query Frame = -3
Query:   56 YSTEIKNLTLKILDQMAKALRMDPNDME---ELFENGMQ----AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQI-KKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLA 442
            Y  E++ L  ++L  +  +L +   D+E   +L ++G +    A R+N+YP C +PE+ +G  +H D++ LT+L Q N   GLQ+ +++  WV V+P P   VVNIGD+  IL+NG  PS+ HRA VN  + R+S+A
Sbjct:  163 YVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSN-TGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIA 298          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 4.795e-19
Identity = 45/150 (30.00%), Postives = 87/150 (58.00%), Query Frame = -3
Query:    2 YSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 442
            ++  ++ L   +LD + + L ++   +++ F   +      ++  YPPC + + + G  +H DA  + +L Q +++ GLQ+ KD +W+ V P+  + V+N+GD LE++TNG Y S+ HR    +   R+S+A+FY+   D  + PA +L+
Sbjct:  117 FAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALV 266          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.262e-19
Identity = 52/157 (33.12%), Postives = 88/157 (56.05%), Query Frame = -3
Query:    5 PLPFRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGM-QAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSL 472
            P  +R+  E Y+  +K L+ KI++ +++ L +    ++E+  NG      +N+YPP    +   G   H D + LT+++  NE+ GLQ+ KD  W+ V+ +P A +VNIGD + +L+NG Y ++ H+ TV+  K R+S     S   D  +GP   L
Sbjct:  109 PPDYREVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEV--NGCWYVMNINHYPPYPHSDSFNGLEPHTDINGLTLIIT-NEIPGLQVFKDDHWIEVEYIPSAIIVNIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPEL 262          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.822e-18
Identity = 48/146 (32.88%), Postives = 83/146 (56.85%), Query Frame = -3
Query:   17 EVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDG--KWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGP 448
            E YS  +  L+  ++  +++A+ ++   + +   +  Q   +N+YP C QP+  +G   H D   +T+LLQ + + GLQ  +DG   W+ V+P+  AFVVN+GD    ++NG + + +H+A VN    RLS+ATF +   D  + P
Sbjct:  161 ERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQ-DLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDARVWP 305          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.059e-18
Identity = 49/142 (34.51%), Postives = 79/142 (55.63%), Query Frame = -3
Query:   23 EVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGEL 448
            E Y  EI  +   I + + K + +     E +FE      R+N Y P +   +V G   H D S LT+L Q +++ GL+++ +G+W++VKP  +A  VNIGD+ + L+NG Y S+ HR    +  ER+S+A F    L+ E+
Sbjct:  157 ETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQ-DQIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFFVCPYLETEI 297          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.301e-18
Identity = 47/133 (35.34%), Postives = 77/133 (57.89%), Query Frame = -3
Query:   47 YSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKE-RLSLATFY 442
            YS E+  L   + + +++AL + PN ++E+          + +PPC +P +  G   H D S LT+LL  N   GLQ+  DG W+ V P P+A + N+GD L++++N  + S+EHR   N  +E R+S+A F+
Sbjct:  174 YSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNN-GGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFF 305          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.924e-18
Identity = 51/163 (31.29%), Postives = 89/163 (54.60%), Query Frame = -3
Query:    2 PLPFRDDWEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAFRMNYYPPCLQP--EKVVGHNSHCDASALTVLLQINEMDGLQI-KKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATFYSLKLDGELGPATSLI 472
            P  FR+  E Y  E+K ++ K L+ + + L+++P +        +      RMN+YP   +   ++ +G   H D   ++ LL+ N+ +GLQI  KDG WV V P   +F V +GD L+++TNG + S++HR   N+ + R+S+  F    L  ++ P + L+
Sbjct:  130 PAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQLIS-LLRSNDTEGLQICVKDGTWVDVTPDHSSFFVLVGDTLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPLSEKIAPLSCLV 291          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.227e-16
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = -3
Query:   50 EVYSTEIKNLTLKILDQMAKALRMDPNDM------EELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDG--KWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATF 448
            E +  E++ L  K+L+    AL +    +      +++ E       +N+YP C  P++ +G  +H D+   T +LQ + + GLQ+ + G  +WV V  +P A VVN+GD+ +ILTNG + S+ HRA VN   +R+SL  F
Sbjct:  164 EEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYF 303          
BLAST of CX671993 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.909e-16
Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = -3
Query:   50 RMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSVKERLSLATF 328
            ++NYYP C QPE  VG  +H D SAL+ +L  N + GLQ+    +WV  +  P   +V++GD LEIL+NG Y S+ HR  VN    R+S   F
Sbjct:  235 KINYYPRCPQPELAVGVEAHTDVSALSFILH-NGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVF 326          
The following BLAST results are available for this feature:
BLAST of CX671993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCH2_ARATH2.811e-1934.931-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G3OX4_ARATH3.671e-1938.69Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
ACCO_DIOKA4.795e-1930.001-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
FLS_MATIN6.262e-1933.12Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
FL3H_HORVU1.822e-1832.88Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
G2OX7_ARATH4.059e-1834.51Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
GSL_ARATH5.301e-1835.34Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G2OX3_ARATH6.924e-1831.29Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]
G3O23_WHEAT2.227e-1634.04Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
LDOX_MAIZE2.909e-1644.09Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D02-G4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671993 ID=CX671993; Name=CX671993; organism=Citrus sinensis; type=EST; length=477bp
CAATAAGACTTGTTGCCGGACCCAATTCTCCATCTAATTTTAGGCTGTAA
AATGTAGCTAAAGATAATCTTTCCTTCACTGAGTTTACAGTTGCGCGATG
TTCAATACTAGGATAAGTTCCATTGGTTAATATCTCTAAAACGTCACCAA
TGTTGACTACAAAGGCATCCGGAAGGGGTTTAACAGCAACCCATTTTCCA
TCTTTCTTAATTTGGAGACCATCCATCTCATTGATTTGGAGGAGGACGGT
GAGTGCGGAGGCATCACAATGAGAATTATGGCCGACAACTTTTTCTGGTT
GCAGACAAGGAGGATAATAATTCATCCTGAATGCTTGCATCCCGTTTTCA
AACAACTCTTCCATATCATTGGGATCCATTCTTAGAGCTTTAGCCATTTG
GTCAAGGATTTTCAGGGTAAGATTTTTAATTTCTGTTGAGTAAACTTCCC
AGTCATCTCTGAATGGAAGAGGCAACT
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