CX671992

Overview
NameCX671992
Unique NameCX671992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11693 contig Csv1_Contig11693:9..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.071e-28
Identity = 72/239 (30.13%), Postives = 133/239 (55.65%), Query Frame = 2
Query:  203 PVIDMHRLLSGDD--SELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ---AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            PVI+M+ L +G+   S L ++++ C+ WGFF+L+NHG+S  L++KV+   ++ +   ++++ K   +   S+G     + +E    DW   F +  LP                   ++ ++ E++ L  ++LD + + L ++   ++++F          +++ YPPC +PE + G  +H DA  L +L Q +++ GL + KDGKWV V P+  + V+N+GD LE++TNG Y S+ HR
Sbjct:    6 PVINMNNL-NGESRVSVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFK---EMVASKGLDS--VETEINDTDWESTFFLRHLPVSNMSEIGDLDEEYKKV--MKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHR 236          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.071e-28
Identity = 79/268 (29.48%), Postives = 139/268 (51.87%), Query Frame = 2
Query:  143 VRLEIDHPLIRNDDTSTQQLPVIDMHRLLSGD----DSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKL------DWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            V+L    PL  +D    + +P ID+      D    ++ +E++     +WGFFQ+INHGVS  L+EK+K  ++DF     + +K+F+     S  F + F+      L      +W   F+    P                 D +  YS ++ NL   + + +++AL ++PN + ++  +       +YYPPC +P+  +G + H D S LTVLL  ++++GLQ++++G W  V  +  A ++NIGD+L+++TN  + S+EHR   N
Sbjct:   46 VKLSTPKPL-PSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFY-----SRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDLPEICR----DIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLP-DQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLAN 302          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.069e-28
Identity = 76/250 (30.40%), Postives = 125/250 (50.00%), Query Frame = 2
Query:  185 TSTQQLPVIDMHRLLSGDDSE-----LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQ-PGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            +S   +P ID+     G DS      +EK+ +  ++WGFFQ+INHG+   ++EK+   I++F     + KK F+ + P     +  +F        +W       T P                 +    YS E+  L   + + +++AL ++ N ++++          +YYPPC QP+  +G   H D S LT+LLQ + + GLQ+  D  WV V P+P A VVN+GD+L+++TN  + S+EHR   N
Sbjct:   57 SSDFSIPTIDLKG--GGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIE----YSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQ-DHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLAN 299          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.314e-28
Identity = 87/286 (30.42%), Postives = 145/286 (50.70%), Query Frame = 2
Query:  101 LANNQPLTTVPPRFV-RLEIDHPLIRND-----DTSTQQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDME---ELFENGMQ----AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQI-KKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            + N   L T+P  F  +L     L+R       D   + +PVID   L + D + L  + +  K WG FQ+ NHG+S  L++ +++  +  F++P + K +         G+G+  I+   +K  W  GFT+                       ++ Y  E++ L  ++L  +  +L +   D+E   +L ++G +    A R+N+YP C +PE+ +G  +H D++ LT+L Q N   GLQ+ +++  WV V+P P   VVNIGD+  IL+NG  PS+ HRA VN
Sbjct:   10 IGNLGSLQTLPESFTWKLTAADSLLRPSSAVSFDAVEESIPVID---LSNPDVTTL--IGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSN-TGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVN 289          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28
Identity = 74/247 (29.96%), Postives = 135/247 (54.66%), Query Frame = 2
Query:  203 PVIDMHRLLSGDD--SELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEK-KKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAF--RMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNS 919
            PVI+M  LL G    + +  L + C+ WG ++L+NHG+S  L+ +V+   ++ +    +++ K+F  +  D+          E + LDW   F +  LPT                  ++ ++ E++NL  ++LD + + L ++   ++++F    +G+  F  +++ YPPC +PE + G  +H DA  + +L Q +++ GLQ+ KDG+W+ V P+  + VVNIGD LE++TNG Y S+ HR    +
Sbjct:    7 PVINME-LLQGSQRPAAMALLRDACENWGLYELLNHGISHELMNRVETVNKEHYRRFREQRFKEFASKTLDTVE------NVEPENLDWESTFFLRHLPTSNISQIPDLDDDCR--STMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQT 244          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.546e-27
Identity = 83/266 (31.20%), Postives = 132/266 (49.62%), Query Frame = 2
Query:  158 DHPLIRNDDTSTQQ--LPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDW--GYGFTMVTLPT-XXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDM------EELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDG--KWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            DHP++       +   +PV+DM      D    E +    ++WG F L+ HGV   L+ +V+A I   F LP  EK +  ++PGDS G+G   I+S   K  W  GY F+   L +                   +E +  E++ L  K+L+    AL +    +      +++ E       +N+YP C  P++ +G  +H D+   T +LQ + + GLQ+ + G  +WV V  +P A VVN+GD+ +ILTNG + S+ HRA VN
Sbjct:   33 DHPVVDGSGAGGEPDAVPVVDMR-----DPFAAEAVGLAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVN 292          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 76/247 (30.77%), Postives = 120/247 (48.58%), Query Frame = 2
Query:  194 QQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENG-----MQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDG-KWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            + +P+ID+            ++ + C+ WG FQ+ NHGV   L++ ++      F LP+  K K  +      G+G   IAS   K  W  GFT+   P                 D +E Y   +K L  K++     +L +   D+E    +        A ++N+YP C +P++ +G  +H D++ LT+L Q N   GLQ+ +D   WV V P P + VVN+GD+  IL+NG + S+ HRA VN
Sbjct:   55 ENIPLIDLDH-----PDATNQIGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQMWSEGFTITGSPLNDFRKLWPQHHLNYC-DIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQ-NNTAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVN 294          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 77/252 (30.56%), Postives = 128/252 (50.79%), Query Frame = 2
Query:  200 LPVIDMHRLLSGDDSE-LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGD------SEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ-----AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNS 919
            +PVID  +L   + +E + ++ N C+EWGFFQL+NHG+   L+E+VK    + + L   E++    +P         EG GQ         +DW   F +                     + ++ Y  EI+ L  K+++ M + L  +   +++ F    Q       ++++YPPC + + V G  +H DA  + +L Q +++ GLQ+ KDG+W+ V+PL DA V+N GD +E+L+NG Y S  HR    S
Sbjct:    3 IPVIDFSKLDGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLR--EERFEGSKPVQLLDTLVKEGDGQRL-----DNVDWEDVFVL-------QDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATS 240          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.637e-27
Identity = 73/243 (30.04%), Postives = 131/243 (53.91%), Query Frame = 2
Query:  203 PVIDMHRLLSGDDSE----LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQ--KLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF--ENGMQ-AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            P+IDM +L + +  E    L+++ + C  WGFFQ++NH +S  L++KV+   ++ +       KKF +Q        +  +++E Q   +DW   F +   PT                  ++ ++ +I+ L+ ++LD + + L ++   ++  F   NG     +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KDG WV V P+  + VVN+GD LE++TNG Y S+ HR
Sbjct:    8 PIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHY-------KKFREQKFKDMVQTKGLVSAESQVNDIDWESTFYLRHRPTSNISEVPDLDDQYRKL--MKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPMKHSIVVNLGDQLEVITNGKYKSVMHR 241          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.444e-27
Identity = 72/246 (29.27%), Postives = 126/246 (51.22%), Query Frame = 2
Query:  185 TSTQQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTL--PTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            T+   LP+IDM R   G D   + + ++ KE+GF Q++NHG+S  ++ ++ A   +FF++P ++K +F+ +  D     + F  S  + L   Y   ++ L  P                 + +  Y++  + + ++IL  + + L + P+        G     +NYYPP   P + +G   HCD   +TVLL    + GL+I   G W+ V+P+P++ V+N G  LE++TNG   ++EHRA  N
Sbjct:   30 TTDVSLPIIDMSR---GRDEVRQAILDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSE--DRSERNKLFCGSAFETLGEKYWIDVLELLYPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLP-GAVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATN 269          
The following BLAST results are available for this feature:
BLAST of CX671992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO3_CUCME1.071e-2830.131-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCH3_ARATH1.071e-2829.481-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH1_ARATH4.069e-2830.401-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G3OX4_ARATH5.314e-2830.42Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
ACCO1_DORSP9.064e-2829.961-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
G3O23_WHEAT1.546e-2731.20Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
G3OX1_ARATH2.019e-2730.77Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
ACCO_MUSAC2.019e-2730.561-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO_DIACA2.637e-2730.04Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
IDS2_HORVU3.444e-2729.27Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D02-G4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671992 ID=CX671992; Name=CX671992; organism=Citrus sinensis; type=EST; length=922bp
GAAGAGTGGAAGAAAACAAAAAGGTAATTTAAATCTACACAATATGGAGG
CAAAAGCAACAGTGATTGGGAGTTCTCTCGTGGAGCCTTCGATTCTGGAC
CTGGCAAATAATCAGCCACTGACCACTGTTCCGCCACGTTTCGTTCGCCT
TGAGATAGACCATCCCTTGATTCGCAACGACGATACTTCAACACAACAAC
TTCCAGTTATCGACATGCACAGGTTGCTCTCTGGAGATGACTCAGAGCTT
GAGAAGCTTGACAATACATGTAAAGAGTGGGGTTTCTTTCAGTTGATTAA
TCATGGAGTTAGCAGTTCATTGGTGGAGAAAGTGAAAGCAGAGATTCAAG
ACTTCTTTAATCTTCCAATTGATGAGAAAAAGAAGTTTTGGCAACAACCA
GGAGATAGTGAGGGATTTGGGCAGCACTTTATTGCGTCTGAAGAGCAGAA
GCTTGATTGGGGATACGGCTTTACTATGGTCACTCTCCCAACTCATCTGA
GGAAACCCCACTTGTTCCCTAAGTTGCCTCTTCCATTCAGAGATGACTTG
GAAGTTTACTCAACAGAAATTAAAAATCTTACCCTGAAAATCCTTGACCA
AATGGCTAAAGCTCTAAGAATGGATCCCAATGATATGGAAGAGTTGTTTG
AAAACGGGATGCAAGCATTCAGGATGAATTATTATCCTCCTTGTCTGCAA
CCAGAAAAAGTTGTCGGCCATAATTCTCATTGTGATGCCTCCGCACTCAC
CGTCCTCCTCCAAATCAATGAGATGGATGGTCTCCAAATTAAGAAAGATG
GAAAATGGGTTGCTGTTAAACCCCTTCCGGATGCCTTTGTAGTCAACATT
GGTGACGTTTTAGAGATATTAACCAATGGAACTTATCCTAGTATTGAACA
TCGCGCAACTGTAAACTCAGTG
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