CX671992

Overview
NameCX671992
Unique NameCX671992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11693 contig Csv1_Contig11693:9..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.974e-26
Identity = 63/240 (26.25%), Postives = 127/240 (52.92%), Query Frame = 2
Query:  197 QLPVIDMHRLLSGD-DSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ---AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            + PV+D+ +L+  + D  +  +++ C+ WGFF+++NHG+   L++  +   ++ + + +++K   +     S+G     +  E + +DW   F +  LP                   ++ +   ++NL   +LD + + L ++   ++++F          +++ YP C +PE + G  +H DA  + +L Q +++ GLQ+ KDG W+ V PL  + V+N+GD LE++TNG Y S+ HR
Sbjct:    6 KFPVVDLSKLIGEERDQTMALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQK---FNDMLKSKGLEN--LEREVEDVDWESTFYLRHLPQSNLYDIPDMSDEYRTA--MKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHR 238          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.496e-26
Identity = 64/241 (26.56%), Postives = 129/241 (53.53%), Query Frame = 2
Query:  194 QQLPVIDMHRLLSGD-DSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ---AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            +  P+I++ +L   + D+ +E + + C+ WGFF+L+NHG+   +++ V+   +  +   ++++ K   +   S+G     + +E   LDW   F +  LP                 + +  ++  ++ L  ++LD + + L ++   +++ F          +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KDG+W+ V P+  + VVN+GD LE++TNG Y S+ HR
Sbjct:    2 ENFPIINLEKLNGSERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFK---ELVASKGL--EAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYR--EVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHR 235          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 8.484e-26
Identity = 72/249 (28.92%), Postives = 131/249 (52.61%), Query Frame = 2
Query:  197 QLPVIDMHRLLSGDDSE---LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGF----TMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSV 922
            ++PVI+++ L S  +     +EK+    +++GFFQ++NHG+   +++K+   ++ F       K++++ +    + F ++F+ S    L  G       TM  +                  D L  YS  ++NL L + + +++AL + PN +EE+          +YYP C QPE   G + H D+  LT+L+Q +++ GLQI  + +W+ V  +P A V+NI D+L+++TN  + S+EHR   N V
Sbjct:   90 KIPVINLNGLSSNSEIRREIVEKIGEASEKYGFFQIVNHGIPQDVMDKMVDGVRKFHEQDDQIKRQYYSR----DRFNKNFLYSSNYVLIPGIACNWRDTMECIMNSNQPDPQEFPDVCR--DILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQ-DQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLANKV 331          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.468e-25
Identity = 63/241 (26.14%), Postives = 131/241 (54.36%), Query Frame = 2
Query:  194 QQLPVIDMHRLLSGDDSE-LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            +  P+I++ +L   + ++ +E + + C+ WGFF+L+NHG+   +++ V+   +  +   ++++ K   +   S+G     + +E   LDW   F +  LP                 + +  ++  ++ L  ++LD + + L ++   ++++F   +      +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KDG+W+ V P+  + VVN+GD LE++TNG Y S+ HR
Sbjct:    2 ENFPIINLEKLNGSERADTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFK---ELVASKGL--EAVQAEVTDLDWESTFFLRHLPVSNICEVPDLDDQYR--EVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHR 235          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 3.224e-25
Identity = 70/243 (28.81%), Postives = 116/243 (47.74%), Query Frame = 2
Query:  200 LPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEG---FGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNS 919
            LP+ID   L  G D     +    KE GFFQ++NHGVS  ++  ++   + FF+LP  +K   + +          G  +    E+   W     +                     D +E ++++ +++  ++L  + + + +  +  E     G     +N+YP C  P+K +G   HCD + +T+LL    ++GL++   G W+ V P P+AFVVN G  LE++TNG   SIEHRA  NS
Sbjct:   35 LPIID---LSCGRDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEKY--WRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLP-GAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNS 271          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.224e-25
Identity = 62/241 (25.73%), Postives = 127/241 (52.70%), Query Frame = 2
Query:  194 QQLPVIDMHRLLSGD-DSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ---AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            +  P+I++  L   + D+ +E + + C+ WGFF+L+NHG+   +++ V+   +  +   ++++ K   +   S+G     + +E   LDW   F +  LP                 + +  ++  ++ L  ++LD + + L ++   +++ F          +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KD +W+ V P+  + V+N+GD LE++TNG Y S+ HR
Sbjct:    2 ENFPIINLENLCGAERDATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFK---ELVASKGL--EAVQAEVTDLDWESTFFLRHLPVSNISEVPDLDDEYR--EVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHR 235          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.224e-25
Identity = 65/242 (26.86%), Postives = 130/242 (53.72%), Query Frame = 2
Query:  194 QQLPVIDMHRLLSGDD--SELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ---AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            +  P+I++ +L +GD+  + +E + + C+ WGFF+L+NHG+   +++ V+   +  +   ++++ K   +   S+G     + +E   LDW   F +  LPT                + +  ++  ++ L  ++LD + + L ++   ++  F          +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KD +W+ V P+  + VVN+GD LE++TNG Y S+ HR
Sbjct:    2 ENFPIINLEKL-NGDERANTMEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFK---ELVASKGL--EAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYR--EVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHR 235          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.224e-25
Identity = 73/250 (29.20%), Postives = 121/250 (48.40%), Query Frame = 2
Query:  203 PVIDMHRLLSGDDSE-------LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGF---GQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSV 922
            PVID    L G D +       ++K+ +  ++WGFFQ++NHG+ +S++++     + FF    + KK+++ +    +           S      W         P                 D    +S ++K L   +L+ +++ L +D + +++  +        NYYPPC QPE  +G   H D   +T+LLQ ++M GLQ+     WV V P P + VVNIGD L++L+N  Y S+EHRA  N+V
Sbjct:   59 PVID----LQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAPNPPSLQEFPTPCGESLID----FSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQ-DDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNV 299          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.210e-25
Identity = 84/284 (29.58%), Postives = 136/284 (47.89%), Query Frame = 2
Query:  128 VPPRFVRLEIDHPLIRNDDTSTQQLPVIDM---HRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGF-------------GQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRM---NYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQ--IKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            + P   R E D P + ND      +P+ID+   H LL      ++++   C+++G FQ+INHG    L+ +     ++FF LP +EK+KF +  G++  F             G+    S E+ L W         P                 + +  YS E++ LT+++LD + + L +        F+N +   +M   NYYPPC  P   +G   H D + +T+L Q  ++ GLQ  I KD  W+AV+P+P AFVVN+G  L+++TN  +    HR   +
Sbjct:   18 IAPLQKRAEKDVP-VGND------VPIIDLQQHHHLL------VQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKF-KPKGEAAKFELPLEQKAKLYVEGEQL--SNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLG----YFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQ--DLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTD 279          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.210e-25
Identity = 81/260 (31.15%), Postives = 128/260 (49.23%), Query Frame = 2
Query:  200 LPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQP---GDSE-------GFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDP-NDMEELF--ENGMQAFRMNYYPPCLQPEK-------VVGHNSHCDASALTVLLQINEMDGLQIK-KDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            +PVIDM      D      L   C+++GFF++INHGVS+ LV  ++ E  DFF+LP  EK +    P   G+S+       G+ ++ + +     D G G    +L                  + LE Y+T ++ +T  +L+++   L + P N + +L   +N     R+N+YPPC    K       V+G   H D   ++VL + N   GLQI   DG W++V P   +F  N+GD L+++TNG + S+ HR   N
Sbjct:   18 IPVIDM-----SDPESKHALVKACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKTQVAGYPFGYGNSKIGRNGDVGWVEYLLMNANH--DSGSGPLFPSL----------LKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVL-RSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLAN 259          
The following BLAST results are available for this feature:
BLAST of CX671992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO1_BRAJU4.974e-2626.251-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO3_PETHY6.496e-2626.561-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
DV4H_CATRO8.484e-2628.92Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCO_TOBAC2.468e-2526.141-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
IDS3_HORVU3.224e-2528.812'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
ACCO4_PETHY3.224e-2525.731-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_SOLLC3.224e-2526.861-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCH3_SOLLC3.224e-2529.201-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
HY6H_HYONI4.210e-2529.58Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
G2OX1_ARATH4.210e-2531.15Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D02-G4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671992 ID=CX671992; Name=CX671992; organism=Citrus sinensis; type=EST; length=922bp
GAAGAGTGGAAGAAAACAAAAAGGTAATTTAAATCTACACAATATGGAGG
CAAAAGCAACAGTGATTGGGAGTTCTCTCGTGGAGCCTTCGATTCTGGAC
CTGGCAAATAATCAGCCACTGACCACTGTTCCGCCACGTTTCGTTCGCCT
TGAGATAGACCATCCCTTGATTCGCAACGACGATACTTCAACACAACAAC
TTCCAGTTATCGACATGCACAGGTTGCTCTCTGGAGATGACTCAGAGCTT
GAGAAGCTTGACAATACATGTAAAGAGTGGGGTTTCTTTCAGTTGATTAA
TCATGGAGTTAGCAGTTCATTGGTGGAGAAAGTGAAAGCAGAGATTCAAG
ACTTCTTTAATCTTCCAATTGATGAGAAAAAGAAGTTTTGGCAACAACCA
GGAGATAGTGAGGGATTTGGGCAGCACTTTATTGCGTCTGAAGAGCAGAA
GCTTGATTGGGGATACGGCTTTACTATGGTCACTCTCCCAACTCATCTGA
GGAAACCCCACTTGTTCCCTAAGTTGCCTCTTCCATTCAGAGATGACTTG
GAAGTTTACTCAACAGAAATTAAAAATCTTACCCTGAAAATCCTTGACCA
AATGGCTAAAGCTCTAAGAATGGATCCCAATGATATGGAAGAGTTGTTTG
AAAACGGGATGCAAGCATTCAGGATGAATTATTATCCTCCTTGTCTGCAA
CCAGAAAAAGTTGTCGGCCATAATTCTCATTGTGATGCCTCCGCACTCAC
CGTCCTCCTCCAAATCAATGAGATGGATGGTCTCCAAATTAAGAAAGATG
GAAAATGGGTTGCTGTTAAACCCCTTCCGGATGCCTTTGTAGTCAACATT
GGTGACGTTTTAGAGATATTAACCAATGGAACTTATCCTAGTATTGAACA
TCGCGCAACTGTAAACTCAGTG
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