CX671992

Overview
NameCX671992
Unique NameCX671992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11693 contig Csv1_Contig11693:9..930. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.182e-25
Identity = 65/242 (26.86%), Postives = 128/242 (52.89%), Query Frame = 2
Query:  194 QQLPVIDMHRLLSGDD--SELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ---AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            +  P+I++  L +GD+    +E + + C+ WGFF+L+NHG+   +++ V+   +  +   ++++ K   +   S+G     + +E   LDW   F +  LPT                + +  ++  ++ L  ++LD + + L ++   ++  F          +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KD +W+ V P+  + VVN+GD LE++TNG Y S+ HR
Sbjct:    2 ENFPIINLENL-NGDERAKTMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFK---ELVASKGL--EAVQAEVTDLDWESTFFLRHLPTSNISQVPDLDEEYR--EVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHR 235          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.380e-25
Identity = 81/262 (30.92%), Postives = 129/262 (49.24%), Query Frame = 2
Query:  176 NDDTSTQQ-----LPVIDMHRLLSGDDSE----LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLP---TXXXXXXXXXXXXXXXXDD-------LEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            N +TST Q     LPVID+  L SG++ +    ++++    KEWGFFQ++NHG+            +D F + + E+KK + QP  S    + F  S+  K  + +G    T P   +                DD       +E Y  EI  +   I + + K + +     E +FE      R+N Y P +   +V G   H D S LT+L Q +++ GL+++ +G+W++VKP  +A  VNIGD+ + L+NG Y S+ HR
Sbjct:   27 NTNTSTIQTSGIKLPVIDLSHLTSGEEVKRKRCVKQMVAAAKEWGFFQIVNHGIP-----------KDVFEMMLLEEKKLFDQP-FSVKVRERF--SDLSKNSYRWGNPSATSPAQYSVSEAFHIILSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQ-DQIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHR 273          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.090e-24
Identity = 73/257 (28.40%), Postives = 129/257 (50.19%), Query Frame = 2
Query:  182 DTSTQQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF-------ENGMQAF-RMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQI----KKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            +T++  +PVI +      +  E   L   C+EWG F + +HGVS SL+  V  +++  F+LP+  K    + P +S G+G   I+    KL W  GF+++                    + +E Y   + +L+ +++  +  +L +   D+  L         + +Q+F ++N YP C  P   +G   H D+S LT+L Q N + GL+I    ++  +W+ V+P+  + VV +GD+  I++NG + S  HRA VN
Sbjct:   41 ETTSGPIPVISL-----SNPEEHGLLRQACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGN-IPGLEIESPQEEGSRWIGVEPIEGSLVVIMGDLSHIISNGQFRSTMHRAVVN 291          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.090e-24
Identity = 71/254 (27.95%), Postives = 128/254 (50.39%), Query Frame = 2
Query:  185 TSTQQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQA---FRMNYYPPC----LQPEKVVGHNSHCDASALTVLLQINEMDGLQIK-KDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNSV 922
            T +  +P++D    LS  D++   +   C+++GFF++INHG+    + ++++E   FF+LP  EK+K    P +  G+G   I       D G+   ++                      L+ Y   ++N+  +ILD MA+ L++ P ++        Q+   FR+N+YP C    +  E ++G   H D   +++L + N   G QI  +DG W++V P   +F +N+GD L+++TNG + S+ HR   N +
Sbjct:   22 TFSSSIPLVD----LSKPDAKT-LIVKACEDFGFFKVINHGIPLDAISQLESEAFKFFSLPQTEKEK--AGPANPFGYGNKRIGLNG---DIGWIEYLLLTTNQDHNFSLYGEDIDKFRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISIL-RSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGI 264          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.090e-24
Identity = 61/241 (25.31%), Postives = 124/241 (51.45%), Query Frame = 2
Query:  194 QQLPVIDMHRLLSGDDSE-LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFENGMQ---AFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHR 904
            +  P+I + ++   + +  +E + + C+ WGFF+L+NHG+   +++ V+   +  +   ++++ K        EG     + +E   +DW   F +  LP                 + +  ++  ++ L  ++LD + + L ++   ++  F          +++ YPPC +P+ + G  +H DA  + +L Q +++ GLQ+ KDG+W+ V P+  + VVN+GD LE++TNG Y S+ HR
Sbjct:    2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG-----VQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYR--EVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHR 235          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.564e-24
Identity = 68/245 (27.76%), Postives = 125/245 (51.02%), Query Frame = 2
Query:  203 PVIDMHRLLSGDDSELEKLDN-TCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELFEN---GMQAF--RMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNS 919
            PVI+M +L   + +   KL N  C+ WGFF+L+NH +   L+++V+   ++ +   ++++ K        EG        +   +DW   F +  LP                   ++ ++ +++ L  ++LD + + L ++   ++  F     G+  F  +++ YPPC +PE   G  +H DA  L +L Q + + GLQ+ KDG+WV V P+  + V+N+GD +E++TNG Y S+ HR    +
Sbjct:    5 PVINMEKLEGQERAATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELMA-SKVEG-----AVVDANDMDWESTFFIRHLPVSNLSEIPDLTDEHRKV--MKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQT 241          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.769e-23
Identity = 66/230 (28.70%), Postives = 119/230 (51.74%), Query Frame = 2
Query:  257 LDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQ----KLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAF--RMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNS 919
            L + C+ WGFF+L+NHG+S    E+ +   ++ +    +  ++F +Q    + F    + S E      LDW   F +  LPT                  ++ ++  ++ L  ++LD + + L ++   ++ +F    +G+  F  +++ YPPC +PE + G  +H DA  + +L Q + + GLQ+ KD +W+ V P+  + VVNIGD LE++TNG Y S+ HR    +
Sbjct:   16 LRDACENWGFFELLNHGISHEPNEQSETVNKEHYR---EHYRRFREQR--FKEFAAKTLDSGENVDGDNLDWESTFFLRHLPTSNISQVPDLDEDCG--STMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPMRHSIVVNIGDQLEVITNGKYKSVMHRVVAQT 238          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.722e-23
Identity = 80/298 (26.85%), Postives = 133/298 (44.63%), Query Frame = 2
Query:  119 LTTVPPRFVRLE---------IDHPLIRNDDTSTQQLPVIDMHRLLSGDDSE------LEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQP--GDSEGFGQHFIASEEQKLDW-GYGFTMV---------TLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKIL-----DQMAKALRMDPNDMEELFENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVN 916
            L+ +PP +VR            D      +D +  ++PV+D+   L     +      +E +     +WG   +  HG+ + L+++++A    FF LP+ +K+ +   P  G  +G+G     +   + +W  Y F +V           P                  DL   ST +  L++ +L     D + KAL           ++ +   ++NYYP C QPE  VG  +H D SAL+ +L  N + GLQ+    +WV  +  P   +V++GD LEIL+NG Y S+ HR  VN
Sbjct:   22 LSAIPPEYVRPADERAGLGDAFDLARTHANDHTAPRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLA--STLLAILSMGLLGTDRGDALEKALTTTTT-RTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILH-NGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVN 315          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.147e-22
Identity = 73/253 (28.85%), Postives = 124/253 (49.01%), Query Frame = 2
Query:  188 STQQLPVIDMHRLLSGDDSELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLP--TXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAFRMNYYPPCLQP-EKVV--GHNSHCDASALTVLLQINEMDGLQI-KKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNS 919
            ++  +PV+++      D     ++   C+E+GFF+++NHGV   L+ +++ E   FF LP   K +    P +  G+G   I      + W     +   P  +                + +E Y  EIK ++ K+L+ +A+ L ++P D        E      R+N+YP   +  EK+V  G   H D   ++VL + N   GLQI  KDG WVAV P   +F +N+GD L+++TNG + S++HR   ++
Sbjct:   27 TSHSIPVVNL-----ADPEAKTRIVKACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLPQSLKNR--AGPPEPYGYGNKRIGPNGD-VGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVL-RSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADT 270          
BLAST of CX671992 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.956e-22
Identity = 61/247 (24.70%), Postives = 127/247 (51.42%), Query Frame = 2
Query:  194 QQLPVIDMHRLLSGDD--SELEKLDNTCKEWGFFQLINHGVSSSLVEKVKAEIQDFFNLPIDEKKKFWQQPGDSEGFGQHFIASEEQKLDWGYGFTMVTLPTXXXXXXXXXXXXXXXXDDLEVYSTEIKNLTLKILDQMAKALRMDPNDMEELF---ENGMQAFRMNYYPPCLQPEKVVGHNSHCDASALTVLLQINEMDGLQIKKDGKWVAVKPLPDAFVVNIGDVLEILTNGTYPSIEHRATVNS 919
            +  PVI+M ++ +G++  + +  +++ C+ WGFF+L+NHG+   L++ V+   +  +   ++++ K        EG     I +E   +DW   + +  LP                   ++ ++  ++ L   +LD + + L ++   +++ F   +      ++  YPPC + + + G  +H DA  + +L Q +++ GLQ+ KD +W+ V P+  + V+N+GD LE++TNG Y S+ HR    +
Sbjct:    2 ESFPVINMEKM-NGEERAATMGLINDACENWGFFELVNHGIPPELMDTVERVTKAHYKKCMEQRFKELVASKALEG-----IQAEVTDMDWESTYFLRHLPQSNISEVPDLDEEYRRV--MKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQT 240          
The following BLAST results are available for this feature:
BLAST of CX671992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO4_SOLLC7.182e-2526.861-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
G2OX7_ARATH9.380e-2530.92Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
G3OX3_ARATH2.090e-2428.40Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
G2OX1_PEA2.090e-2427.95Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]
ACCO1_PETHY2.090e-2425.311-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_PERAE3.564e-2427.761-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]
ACCO_DENCR1.769e-2328.701-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
LDOX_MAIZE6.722e-2326.85Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
G2OX2_ARATH1.147e-2228.85Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
ACCO_DIOKA1.956e-2224.701-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14D02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14D02-G4-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671992 ID=CX671992; Name=CX671992; organism=Citrus sinensis; type=EST; length=922bp
GAAGAGTGGAAGAAAACAAAAAGGTAATTTAAATCTACACAATATGGAGG
CAAAAGCAACAGTGATTGGGAGTTCTCTCGTGGAGCCTTCGATTCTGGAC
CTGGCAAATAATCAGCCACTGACCACTGTTCCGCCACGTTTCGTTCGCCT
TGAGATAGACCATCCCTTGATTCGCAACGACGATACTTCAACACAACAAC
TTCCAGTTATCGACATGCACAGGTTGCTCTCTGGAGATGACTCAGAGCTT
GAGAAGCTTGACAATACATGTAAAGAGTGGGGTTTCTTTCAGTTGATTAA
TCATGGAGTTAGCAGTTCATTGGTGGAGAAAGTGAAAGCAGAGATTCAAG
ACTTCTTTAATCTTCCAATTGATGAGAAAAAGAAGTTTTGGCAACAACCA
GGAGATAGTGAGGGATTTGGGCAGCACTTTATTGCGTCTGAAGAGCAGAA
GCTTGATTGGGGATACGGCTTTACTATGGTCACTCTCCCAACTCATCTGA
GGAAACCCCACTTGTTCCCTAAGTTGCCTCTTCCATTCAGAGATGACTTG
GAAGTTTACTCAACAGAAATTAAAAATCTTACCCTGAAAATCCTTGACCA
AATGGCTAAAGCTCTAAGAATGGATCCCAATGATATGGAAGAGTTGTTTG
AAAACGGGATGCAAGCATTCAGGATGAATTATTATCCTCCTTGTCTGCAA
CCAGAAAAAGTTGTCGGCCATAATTCTCATTGTGATGCCTCCGCACTCAC
CGTCCTCCTCCAAATCAATGAGATGGATGGTCTCCAAATTAAGAAAGATG
GAAAATGGGTTGCTGTTAAACCCCTTCCGGATGCCTTTGTAGTCAACATT
GGTGACGTTTTAGAGATATTAACCAATGGAACTTATCCTAGTATTGAACA
TCGCGCAACTGTAAACTCAGTG
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