CX671987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_PROM5 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9515) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 70/208 (33.65%), Postives = 102/208 (49.04%), Query Frame = 1 Query: 64 MGKEKF-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISG---FEGDN 663 M +EKF H+NI IGHVD GK+T T I + ++ + +A + +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + D IP V +SG EGD+ Sbjct: 1 MAREKFERNKPHVNIGTIGHVDHGKTTLTA-------AITNVLAKKGQAQAQDYGD--------IDGAPEERERGITINTAHVEYETEGRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLDSYDFPGDDIPIVQVSGLKALEGDS 183
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_PROM3 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9303) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 66/202 (32.67%), Postives = 98/202 (48.51%), Query Frame = 1 Query: 64 MGKEKF-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFE 654 M +EKF H+NI IGHVD GK+T T + L + ++ + + +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + D IP V +SG + Sbjct: 1 MAREKFERNKPHVNIGTIGHVDHGKTTLTAAITSVLAKKGQAKVQDYAE---------------IDGAPEERERGITINTAHVEYETDGRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPIVQVSGLK 177
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_MYCUA (Elongation factor Tu OS=Mycobacterium ulcerans (strain Agy99) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 66/163 (40.49%), Postives = 93/163 (57.06%), Query Frame = 1 Query: 64 MGKEKF-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 534 M K KF H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 1 MAKAKFQRTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDA 142
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTU (Elongation factor Tu OS=Mycobacterium tuberculosis GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 64 MGKEKF-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 534 M K KF H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 1 MAKAKFQRTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTA (Elongation factor Tu OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 64 MGKEKF-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 534 M K KF H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 1 MAKAKFQRTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS2 (Elongation factor Tu OS=Mycobacterium smegmatis GN=tuf PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 66/163 (40.49%), Postives = 93/163 (57.06%), Query Frame = 1 Query: 64 MGKEKF-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 534 M K KF H+NI IGHVD GK+T T I K + ++F ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 1 MAKAKFERTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDA 142
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_MYCMM (Elongation factor Tu OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 66/163 (40.49%), Postives = 93/163 (57.06%), Query Frame = 1 Query: 64 MGKEKF-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 534 M K KF H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 1 MAKAKFQRTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDA 142
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_MYCHP (Elongation factor Tu OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=tuf PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 67/205 (32.68%), Postives = 103/205 (50.24%), Query Frame = 1 Query: 70 KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGDNMIER 675 + K H+NI IGHVD GK+T T + L +K AE YA + D E+ RGITI+ + +++T K + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK+D + + +V S L + G++ D P + + +GD E+ Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIATVLA----------KKGLAEARD----YASI-DNAPEEKARGITINTSHIEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPKIVVFLNKIDMFKDDEREEMVGLVEMDVRSLLSEYGFDGDNAPIIAGSALKALQGDPEYEK 190
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBT (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 64 MGKEKF-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 534 M K KF H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 1 MAKAKFQRTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142
BLAST of CX671987 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBP (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tuf PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21 Identity = 66/162 (40.74%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 64 MGKEKF-----HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 534 M K KF H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 1 MAKAKFQRTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142 The following BLAST results are available for this feature:
BLAST of CX671987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671987 ID=CX671987; Name=CX671987; organism=Citrus sinensis; type=EST; length=683bpback to top |