CX671986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 4.817e-63 Identity = 116/127 (91.34%), Postives = 124/127 (97.64%), Query Frame = -2 Query: 372 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 752 GYVAS SKDDPAK A++FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELEKEPKFLKNGDAG VKM+PTKPMVVETFS+YPPLGRFAVRDMRQTVAVGVIKSV+KKDP+GA Sbjct: 311 GYVASGSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSQYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGA 437
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A2_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare GN=BLT63 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 9.084e-62 Identity = 115/127 (90.55%), Postives = 122/127 (96.06%), Query Frame = -2 Query: 372 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 752 GYVASNSKDDPAK A+NFT+QVIIMNHPGQI NGYAPVLDCHTSHIAVKFAEI TKIDRRSGKELE PKFLKNGDAGFVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGVIKSV+KK+P+GA Sbjct: 311 GYVASNSKDDPAKEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKKEPTGA 437
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A1_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 9.084e-62 Identity = 115/127 (90.55%), Postives = 122/127 (96.06%), Query Frame = -2 Query: 372 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 752 GYVASNSKDDPAK A+NFT+QVIIMNHPGQI NGYAPVLDCHTSHIAVKFAEI TKIDRRSGKELE PKFLKNGDAGFVKMIPTKPMVVETF++YPPLGRFAVRDMRQTVAVGVIKSV+KK+P+GA Sbjct: 311 GYVASNSKDDPAKEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKKEPTGA 437
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.452e-61 Identity = 114/127 (89.76%), Postives = 121/127 (95.28%), Query Frame = -2 Query: 372 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 752 G+VASNSKDDPAK A+NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAE++TKIDRRSGKELE PKFLKNGDAG VKMIPTKPMVVETF+ YPPLGRFAVRDMRQTVAVGVIK V+KKDP+GA Sbjct: 311 GFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEALPKFLKNGDAGIVKMIPTKPMVVETFATYPPLGRFAVRDMRQTVAVGVIKGVEKKDPTGA 437
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_SCHCO (Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.581e-50 Identity = 93/126 (73.81%), Postives = 112/126 (88.89%), Query Frame = -2 Query: 375 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 752 G VAS+SK+DPAK A++F +QVI++NHPGQIG GYAPVLDCHT+HIA KFAE+L KIDRR+GK LE PKF+K+GDA VK++P+KPM VE+++EYPPLGRFAVRDMRQTVAVG+IKSVDK D SG Sbjct: 321 GNVASDSKNDPAKEAASFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKSLEASPKFVKSGDACIVKLVPSKPMCVESYNEYPPLGRFAVRDMRQTVAVGIIKSVDKTDKSG 446
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_TRYBB (Elongation factor 1-alpha OS=Trypanosoma brucei brucei GN=TEF1 PE=1 SV=3) HSP 1 Score: 196.823 bits (499), Expect = 1.042e-49 Identity = 94/126 (74.60%), Postives = 109/126 (86.51%), Query Frame = -2 Query: 375 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 752 G V N+K+DP K A++FT+QVII+NHPGQIGNGYAPVLDCHTSHIA KFAEI +KIDRRSGKELEK PK +K+GDA V+M+P KPM VE F++Y PLGRFAVRDMRQTVAVG+IK+V KKD SG Sbjct: 311 GNVCGNTKNDPPKEAADFTAQVIILNHPGQIGNGYAPVLDCHTSHIACKFAEIESKIDRRSGKELEKAPKSIKSGDAAIVRMVPQKPMCVEVFNDYAPLGRFAVRDMRQTVAVGIIKAVTKKDGSG 436
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_ORYLA (Elongation factor 1-alpha OS=Oryzias latipes GN=eef1a PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.321e-49 Identity = 93/126 (73.81%), Postives = 108/126 (85.71%), Query Frame = -2 Query: 375 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 752 GYVA +SK+DP K A++F +QVII+NHPGQI GYAPVLDCHT+HIA KF E++ KIDRRSGK+LE PKF+K+GDA VK+IP KPMVVE FS YPPLGRFAVRDMRQTVAVGVIK+VD K+ SG Sbjct: 323 GYVAGDSKNDPPKAAASFNAQVIILNHPGQINQGYAPVLDCHTAHIACKFNELIEKIDRRSGKKLEDNPKFVKSGDAAIVKLIPQKPMVVEPFSNYPPLGRFAVRDMRQTVAVGVIKAVDTKEISG 448
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_ABSGL (Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.321e-49 Identity = 92/126 (73.02%), Postives = 111/126 (88.10%), Query Frame = -2 Query: 375 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 752 G V S+SK+DPAK A +FT+QVI++NHPGQIG GYAPVLDCHT+HIA KFAE+L KIDRRSGK+LE PKF+K+GD+ VKMIP+KPM VE +++YPPLGRFAVRDMRQTVAVGVIK+V+K D +G Sbjct: 321 GNVCSDSKNDPAKEAGSFTAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 446
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_COCIM (Elongation factor 1-alpha OS=Coccidioides immitis GN=TEF PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 1.965e-48 Identity = 87/126 (69.05%), Postives = 108/126 (85.71%), Query Frame = -2 Query: 375 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 752 G VA +SK+DP KG +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+E+L KIDRR+GK +E PKF+K+GDA VKM+P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIKSV+K + +G Sbjct: 322 GNVAGDSKNDPPKGCDSFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSEKTG 447
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_NEUCR (Elongation factor 1-alpha OS=Neurospora crassa GN=tef-1 PE=3 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 2.566e-48 Identity = 89/121 (73.55%), Postives = 107/121 (88.43%), Query Frame = -2 Query: 390 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 752 G VA +SK+DP GA++FT+QVI++NHPGQ+G GYAPVLDCHT+HIA KFAE+L KIDRR+GK +E PKF+K+GDA VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK+VDK Sbjct: 322 GNVAGDSKNDPPAGAASFTAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKAVEASPKFIKSGDAAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVDK 442 The following BLAST results are available for this feature:
BLAST of CX671986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671986 ID=CX671986; Name=CX671986; organism=Citrus sinensis; type=EST; length=753bpback to top |