CX671986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 5.563e-27 Identity = 53/111 (47.75%), Postives = 80/111 (72.07%), Query Frame = -2 Query: 396 DDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 728 ++P A FT+++I++ HP + NGY PV+ HT+ +A + +E+++K+D R+G+E EK P+FLK GD VK P KP+ VE ++E+PPLGRFA+RDM +TV VG+I V Sbjct: 317 NNPPTVADEFTARIIVVWHPTALANGYTPVIHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGIIVDV 427
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.239e-26 Identity = 56/125 (44.80%), Postives = 83/125 (66.40%), Query Frame = -2 Query: 384 GYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 752 G VA ++ + P + F +Q+I++NHP I GY PVL HT +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTKPMV+E E P +GRFA+RDM QTVA G++ S+ K + Sbjct: 304 GDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.618e-26 Identity = 56/125 (44.80%), Postives = 83/125 (66.40%), Query Frame = -2 Query: 384 GYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 752 G VA ++ + P + F +Q+I++NHP I GY PVL HT +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTKPMV+E E P +GRFA+RDM QTVA G++ S+ K + Sbjct: 304 GDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.618e-26 Identity = 57/118 (48.31%), Postives = 81/118 (68.64%), Query Frame = -2 Query: 387 SNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 740 + S + P A FT+Q+I++ HP + GY PV+ HT+ +A + E+ +KID ++GKE+EK P+FLK+GD+ VKM P K +VVE F E+P LGRFA+RDM +TV VGV+ V K Sbjct: 313 AGSLNVPPTVADEFTAQIIVIWHPTAVSVGYTPVVHIHTASVACRITELTSKIDPKTGKEVEKNPQFLKSGDSAIVKMKPIKELVVEKFREFPALGRFAMRDMGKTVGVGVVIDVKPK 430
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.618e-26 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = -2 Query: 384 DDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 728 D+P A FT+Q++++ HP I GY PV HT+ +A F E+L K+D R+G+ +E+ P+FLK GDA VK+ PTKPMV+E E P LGRFA+RDM T+A G+ V K+ Sbjct: 313 DNPPTVAEEFTAQIVVLQHPTAITVGYTPVFHAHTAQVACTFIELLKKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQLGRFAIRDMGMTIAAGMAIDVKAKN 427
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.761e-26 Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = -2 Query: 384 DPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 725 +P A++FT+Q++++ HP + +GY PV HT+ IA FAEI K++ +G+ LE+ P FLK GDA VK+IPTKPMV+E+ E P LGRFA+RDM TVA G+ V K+ Sbjct: 314 NPPTVATDFTAQIVVLQHPSVLTDGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.606e-26 Identity = 56/125 (44.80%), Postives = 83/125 (66.40%), Query Frame = -2 Query: 384 GYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 752 G VA ++ + P + F +Q+I++NHP I GY PVL HT+ +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTK MV+E E P +GRFA+RDM QTVA G++ S+ K D Sbjct: 304 GDVAGHTTNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAD 428
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 57/115 (49.57%), Postives = 76/115 (66.09%), Query Frame = -2 Query: 408 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGV 752 G VA + D PA A F +Q++++ HPG I GY PV CHTS +A F E+ K+D +G+ E+ P FLK G+A FVK+ PTKPMV+E + P +GRFA+RDM QTVA G+ Sbjct: 292 GDVAGHVDDAPAV-AKEFDAQIVVLQHPGVITVGYTPVFHCHTSQVACTFLELTAKLDPATGQVAEENPDFLKTGNAAFVKVKPTKPMVIENAKKIPQMGRFAIRDMGQTVAAGL 405
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = -2 Query: 387 DDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 728 D P A F +QV++++HP + GY PV CHT+ IA F E++ K+D R+G+ E+ P FLK GDA VK+ PT+PMV+E E P LGRFAVRDM T+A GV + K Sbjct: 309 DVPPTVAEEFIAQVVVLHHPSALTVGYTPVFHCHTAQIACSFVELMKKLDPRTGQVKEENPTFLKTGDAAIVKIRPTQPMVIEKVKEIPQLGRFAVRDMGSTIAAGVCMDITPK 422
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.150e-26 Identity = 58/115 (50.43%), Postives = 78/115 (67.83%), Query Frame = -2 Query: 396 SNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 740 + S +P A FT+QVI++ HP +G GY PVL HT+ IA + +EI ++ID ++GKE EK P+F+K GD+ VK P K +V E F E+P LGRFA+RDM +TV VGVI V Sbjct: 313 AGSVQNPPTVADEFTAQVIVIWHPTAVGVGYTPVLHVHTASIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIVKFKPIKELVAEKFREFPALGRFAMRDMGKTVGVGVIIDV 427 The following BLAST results are available for this feature:
BLAST of CX671986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671986 ID=CX671986; Name=CX671986; organism=Citrus sinensis; type=EST; length=753bpback to top |