CX671986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.150e-26 Identity = 54/110 (49.09%), Postives = 78/110 (70.91%), Query Frame = -2 Query: 396 DPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 725 +P A FT++VI++ HP + GY PV+ HT+ IA + +EI+ ++D ++GKE EK P+F+K G++ VK P KP+ VE FS++PPLGRFA+RDM +TV VGVI V Sbjct: 318 NPPTVAEEFTARVIVVWHPTALAVGYTPVVHVHTASIACRVSEIVARLDPKTGKEAEKNPQFIKQGESAIVKFKPIKPLCVEKFSDFPPLGRFAMRDMGKTVGVGVINDV 427
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.150e-26 Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = -2 Query: 387 DDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 728 ++P A FT+QV+++ HP + GY PV CHTS A F E+ K+D RSG+ E+ P FLK GDA + PT+P+V+ET E P LGRFAVRDM TVA G++ SV K Sbjct: 309 ENPPTVAEEFTAQVVVLQHPSVLSVGYTPVFHCHTSQTACMFTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSVKAK 422
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.032e-26 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = -2 Query: 384 DPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 725 +P A++FT+Q++++ HP + GY PV HT+ IA FAEI K++ +G+ LE+ P FLK GDA VK+IPTKPMV+E+ E P LGRFA+RDM TVA G+ V K+ Sbjct: 314 NPPTVATDFTAQIVVLQHPSVLTVGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.032e-26 Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = -2 Query: 396 DDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 728 D P A FT+++ ++ HP I GY PV+ HT+ IA + EI K+D R+G+ +EK P+FLK GDA VK P KPMV+E +SE+P LGRFA+RDM +T+ +G++ V Sbjct: 319 DKPPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDV 429
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25 Identity = 55/125 (44.00%), Postives = 83/125 (66.40%), Query Frame = -2 Query: 384 GYVASNSKDDPA--KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 752 G VA ++ + P + F +Q+I++NHP I GY PVL HT+ +AV+F ++L K+D R+G +E+ P+F+K GD+ V + PTK MV+E E P +GRFA+RDM QTVA G++ S+ K + Sbjct: 304 GDVAGHTTNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25 Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = -2 Query: 387 DDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 728 D P A FT+Q++++ HP I GY PV CHT+ IA F E+ K+D RSG+ E+ P FLK+GDA V++ P++PMV+E+ E P LGRFA+RDM T+A G+ +V K Sbjct: 309 DIPPTVADEFTAQIVVLQHPSAITVGYTPVFHCHTAQIACTFVELRKKLDPRSGQTKEENPTFLKSGDAAIVQIKPSRPMVIESVKEIPQLGRFAIRDMGTTIAAGMCIAVQPK 422
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.049e-25 Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = -2 Query: 387 DDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 728 + P A FT+QV+++ HP I GY PV CHT+ A F E+ K+D RSG+ E+ P FLK GDA V++ PTKPMV+E E P LGRFAVRDM T+A G+ ++ K Sbjct: 309 EQPPTVADEFTAQVVVLQHPSAITVGYTPVFHCHTTQTACTFIELKKKLDPRSGQTKEENPTFLKTGDAAIVQIKPTKPMVIENVKELPQLGRFAVRDMGSTIAAGMCIAIQPK 422
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25 Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = -2 Query: 396 DDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 728 D+P A FT+Q++++ HP I GY PV CHT+ +A EI K+D R+G E+ P F+K GDA + + PTKPMV+E E P LGRFA+RDM T+A G+ ++V Sbjct: 311 DNPPTVAKEFTAQIVVLQHPSAISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAFIKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNV 421
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.789e-25 Identity = 54/118 (45.76%), Postives = 79/118 (66.95%), Query Frame = -2 Query: 384 DDPAKGAS---NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 728 D+PA + F +Q++++ HP I GY PV CHT+ +A KF E++ KID +G+ +E+ P FLK G+A V++ PTKPMV+E S P LGRFA+RDM QTVA G+ ++K++ Sbjct: 306 DEPATVVTPDDTFIAQIVVLQHPSAITAGYTPVFHCHTAQVACKFEELIEKIDPATGEVIEENPDFLKTGEAAKVRIRPTKPMVIEEVSFIPQLGRFAIRDMGQTVAAGMCVKIEKEE 423
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.337e-25 Identity = 53/111 (47.75%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 396 DDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 728 D+P A FT++V I+ HP I GY PV+ HT+ +A + EI K+D R+GK +E+ P+F+K GDA V+ P KP+VVE +S++PPLGRFA+RDM +T+ +GV+ V Sbjct: 318 DNPPTVAEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDV 428 The following BLAST results are available for this feature:
BLAST of CX671986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671986 ID=CX671986; Name=CX671986; organism=Citrus sinensis; type=EST; length=753bpback to top |