CX671986

Overview
NameCX671986
Unique NameCX671986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.033e-45
Identity = 87/122 (71.31%), Postives = 103/122 (84.43%), Query Frame = -2
Query:  387 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 752
            G V  +SK DP + A+ FTSQVII+NHPGQI  GY+PV+DCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  323 GNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_YEAST (Elongation factor 1-alpha OS=Saccharomyces cerevisiae GN=TEF1 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.655e-45
Identity = 85/123 (69.11%), Postives = 102/123 (82.93%), Query Frame = -2
Query:  384 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 752
            G V  ++K+DP KG ++F + VI++NHPGQI  GY+PVLDCHT+HIA +F E+L K DRRSGK+LE  PKFLK+GDA  VK +P+KPM VE FSEYPPLGRFAVRDMRQTVAVGVIKSVDK +
Sbjct:  321 GNVCGDAKNDPPKGCASFNATVIVLNHPGQISAGYSPVLDCHTAHIACRFDELLEKNDRRSGKKLEDHPKFLKSGDAALVKFVPSKPMCVEAFSEYPPLGRFAVRDMRQTVAVGVIKSVDKTE 443          
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A3_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-3 PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.655e-45
Identity = 86/126 (68.25%), Postives = 109/126 (86.51%), Query Frame = -2
Query:  375 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 752
            G V S+SK+DPAK +++FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+E++ KIDRRS K +E  PKF+K+GD+  VKM+P+KPM VE +++YPPLGRFAVRDMRQTVAVGVIK+V+K D +G
Sbjct:  321 GNVCSDSKNDPAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSEK-MEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 445          
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A2_RAT (Elongation factor 1-alpha 2 OS=Rattus norvegicus GN=Eef1a2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45
Identity = 87/122 (71.31%), Postives = 103/122 (84.43%), Query Frame = -2
Query:  387 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 752
            G V  +SK DP + A+ FTSQVII+NHPGQI  GY+PV+DCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  323 GNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A2_MOUSE (Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef1a2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45
Identity = 87/122 (71.31%), Postives = 103/122 (84.43%), Query Frame = -2
Query:  387 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 752
            G V  +SK DP + A+ FTSQVII+NHPGQI  GY+PV+DCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  323 GNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45
Identity = 83/126 (65.87%), Postives = 104/126 (82.54%), Query Frame = -2
Query:  375 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 752
            G V  +SK+DP   A++F +QVI++NHPGQIG GY PVLDCHT+HIA KFAE++ KIDRR+GK +E  PKF+K+GDA  VK++  KP+ VET+++YPPLGRFAVRDMRQTVAVGVIKSVDK +  G
Sbjct:  321 GNVCGDSKNDPPMEAASFNAQVIVLNHPGQIGAGYTPVLDCHTAHIACKFAELIEKIDRRTGKVMEAAPKFVKSGDAAIVKLVAQKPLCVETYADYPPLGRFAVRDMRQTVAVGVIKSVDKTEKGG 446          
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A2_DROME (Elongation factor 1-alpha 2 OS=Drosophila melanogaster GN=Ef1alpha100E PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45
Identity = 82/123 (66.67%), Postives = 105/123 (85.37%), Query Frame = -2
Query:  384 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 752
            GYVA +SK++P +GA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+EI  K DRR+GK  E EPK +K+GDA  + ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIKSV+ K+
Sbjct:  323 GYVAGDSKNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKSVNFKE 445          
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_TETPY (Elongation factor 1-alpha OS=Tetrahymena pyriformis PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.721e-44
Identity = 87/123 (70.73%), Postives = 100/123 (81.30%), Query Frame = -2
Query:  384 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 752
            G VAS++K+DPAK A+ F SQVIIMNHPGQI  GY PVLDCHT+HIA KF  I  KIDRR+GK  E+ PKF+KNGDA  V +IPTK + VE F EYPPLGR+AVRDM+QTVAVGVIK V+KKD
Sbjct:  312 GNVASDAKNDPAKEAATFYSQVIIMNHPGQIQAGYTPVLDCHTAHIACKFETIHDKIDRRTGKSQEENPKFIKNGDAALVTLIPTKALCVEVFQEYPPLGRYAVRDMKQTVAVGVIKKVEKKD 434          
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.721e-44
Identity = 85/126 (67.46%), Postives = 101/126 (80.16%), Query Frame = -2
Query:  375 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 752
            G V  +SK+DP K A +F + VI++NHPGQI  GY+PVLDCHT+HIA KF E+L K DRR+GK+LE  PKFLK GDA  VK +P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIKSV K D +G
Sbjct:  321 GNVCGDSKNDPPKAAESFNATVIVLNHPGQISAGYSPVLDCHTAHIACKFDELLEKNDRRTGKKLEDSPKFLKAGDAAMVKFVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVVKSDKAG 446          
BLAST of CX671986 vs. ExPASy Swiss-Prot
Match: EF1A_HYDAT (Elongation factor 1-alpha OS=Hydra attenuata PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.248e-44
Identity = 86/121 (71.07%), Postives = 103/121 (85.12%), Query Frame = -2
Query:  390 GYVASNSKDDPAKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 752
            G VAS+SK+DPA  A++F +QVII+NHPG+I  GY PVLDCHT+HIA KFAE+L KIDRRSGK +E EPK +K+GDA  + +IP+K M VE+FS+YPPLGRFAVRDMRQTVAVGVIK VDK
Sbjct:  325 GMVASDSKNDPAIEAASFKAQVIILNHPGEIHAGYQPVLDCHTAHIACKFAELLEKIDRRSGKVIETEPKMVKSGDAAIINLIPSKGMCVESFSQYPPLGRFAVRDMRQTVAVGVIKEVDK 445          
The following BLAST results are available for this feature:
BLAST of CX671986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A2_BOVIN2.033e-4571.31Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]
EF1A_YEAST2.655e-4569.11Elongation factor 1-alpha OS=Saccharomyces cerevis... [more]
EF1A3_RHIRA2.655e-4568.25Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A2_RAT3.468e-4571.31Elongation factor 1-alpha 2 OS=Rattus norvegicus G... [more]
EF1A2_MOUSE3.468e-4571.31Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef... [more]
EF1A_CRYNE7.726e-4565.87Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]
EF1A2_DROME7.726e-4566.67Elongation factor 1-alpha 2 OS=Drosophila melanoga... [more]
EF1A_TETPY1.721e-4470.73Elongation factor 1-alpha OS=Tetrahymena pyriformi... [more]
EF1A_ASHGO1.721e-4467.46Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]
EF1A_HYDAT2.248e-4471.07Elongation factor 1-alpha OS=Hydra attenuata PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C09_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C09-E18-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671986 ID=CX671986; Name=CX671986; organism=Citrus sinensis; type=EST; length=753bp
TTTTTTATTTGAAAATGGCAAACTAGATAGAACATAAAACATCAACAAAC
AACATCTTAAGGAGCTCAGCAGAGACCTAAAACTCCTGAGCTGCTTACAA
AATATCCAAGTTTGAACATGACATGGACAACAAAAATAGACTCAATACAG
TAATCTCGCCACCGCCGATCAAGAACCCAGTTCTGTGAACAAAAGTCTCT
TGTCGATGGTGACGAATTGTAATTATAACCAGCAAATTGACGACCCAAAC
ATCCAACACATTTATGCCTAAAAAGAACACAATCTTTATTGTGATGACGC
CTATAGACATTACTTGCAGACAAAGATACCAGCACAGTTCACTTCTTCTT
CACAGCAGACTTGGTTACCTTGGCTCCAGATGGATCCTTCTTGTCCACGC
TCTTGATGACTCCAACAGCGACGGTCTGGCGCATGTCTCTCACAGCAAAA
CGACCAAGTGGGGGATATTCGGAGAAAGTTTCCACAACCATAGGCTTGGT
GGGAATCATCTTAACAAACCCAGCATCACCATTCTTTAAGAATTTGGGCT
CCTTCTCCAGCTCCTTACCAGATCGCCTGTCAATCTTGGTCAAGATTTCA
GCAAACTTGACAGCTATGTGGGAAGTGTGGCAATCAAGAACAGGTGCATA
ACCGTTTCCAATCTGGCCAGGGTGGTTCATGATGATAACTTGGGAGGTGA
AGTTGGATGCCCCCTTGGCGGGATCGTCCTTGGAGTTAGATGCAACGTAA
CCA
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