EY664598

Overview
NameEY664598
Unique NameEY664598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7118 contig Csv1_Contig7118:34..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.841e-13
Identity = 46/122 (37.70%), Postives = 66/122 (54.10%), Query Frame = 3
Query:  156 DDHFLFSGL--------GVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTG----YVKTLKKGDIMIFPQG*QHYQVNASAD 485
            DD FL + L          AG+  ++IN         +   +N LG+S+AR+  A  G  P HTHP A+EIL V+ G +  GF++S+   G    + KTL KGD+ +FP+G  H+Q N S D
Sbjct:   56 DDFFLAANLDKPMDITKSKAGSNVTLINVM-------KLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYD 170          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.925e-13
Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 3
Query:  156 DDHFLFSGLGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYV-KTLKKGDIMIFPQG*QHYQVN 473
            DD F  + L    +T + + + +T     Q P +N LG+S+ARL  A  G+ P HTHP A+EI  V+ G +  GF++S+ +   + K L KGD+ +FP+G  H+Q N
Sbjct:   58 DDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFN 164          

HSP 2 Score: 21.1718 bits (43), Expect = 1.925e-13
Identity = 9/23 (39.13%), Postives = 11/23 (47.83%), Query Frame = 2
Query:   74 VNDFCVPDLKLTDSPAGYPCVPP 142
            + DFCV DL       G+ C  P
Sbjct:   30 LQDFCVADLNSPVRVNGFVCKNP 52          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.101e-13
Identity = 48/149 (32.21%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  138 PPLMVTDDHFLFSGLGVAGNTTS--IINAAMTPAFGAQFPAVNGLGLSLARL-YLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTG----YVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFANN 563
            P   VT + F F GLG   +  S   + +A+T A   + P +N LG+S+AR+ Y   GG  P H+HP A+EIL V  G +  GF+ ++A         + + KG + +FP+G  HY+ +     A+   +F+S     Q    +LF ++
Sbjct:   57 PEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSS 205          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.995e-13
Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 3
Query:  156 DDHFLFSGLGVAGNTT-SIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSS----ANTGYVKTLKKGDIMIFPQG*QHYQVNASAD 485
            DD FL + L    +TT S   + +T     +   +N L +S+AR+  A  G  P HTHP A+EIL V+ G +  GF++S+     N  + KTL KGD+ +FPQG  H+Q N S D
Sbjct:   56 DDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYD 170          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.193e-12
Identity = 41/126 (32.54%), Postives = 67/126 (53.17%), Query Frame = 3
Query:  180 LGVAGNTTSIINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNASADGALGFDSFNSPNTVLQITDFSLFA 557
            L  AG+  +++ ++       +FP +N LG+S+AR  +A  G +  H+HP ASE++ V  G +  GF  +     + KTL +GD+ IFP+G  H+ +N     A  F   NS N  +     ++FA
Sbjct:   65 LNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGKL-FQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFA 189          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.658e-12
Identity = 46/142 (32.39%), Postives = 69/142 (48.59%), Query Frame = 3
Query:  141 PLMVTDDHFLFSGLGVAGNTTS---IINAAMTPAFGAQFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSANTGYVKTLKKGDIMIFPQG*QHYQVNA-SADGALGFDSFNSPNTVLQITDFSLF 554
            P   +   F  S L   GNT +   +IN  +T    A  P +N +GL++ARL     GV+P H HP ASE+ + + G +  GF+ +S    + + L  G+  +FP+G  H+  N  +   AL     +S N   QI   S F
Sbjct:   48 PTQASVSDFSTSALSRPGNTKTKPFMINVTVTTT--ANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDTSGRV-FTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSF 186          
BLAST of EY664598 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.639e-11
Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 3
Query:  243 QFPAVNGLGLSLARLYLAKGGVIPIHTHPAASEILLVVHGCITDGFISSSA-NTGYVKTLKKGDIMIFPQG*QHYQVN 473
            + P +N LG+S+ R+  A  G+ P HTHP A+EI  V+ G +  GF++S+  N  + K L KGD+ +FP+G  H+Q N
Sbjct:   87 EIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNKLFSKVLNKGDVFVFPKGLIHFQFN 164          

HSP 2 Score: 22.3274 bits (46), Expect = 1.639e-11
Identity = 9/25 (36.00%), Postives = 12/25 (48.00%), Query Frame = 2
Query:   74 VNDFCVPDLKLTDSPAGYPCVPPAH 148
            + DFCV DL       G+ C  P +
Sbjct:   29 LQDFCVADLNSAVRVNGFACKNPTN 53          
The following BLAST results are available for this feature:
BLAST of EY664598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL123_ORYSJ1.841e-1337.70Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL82_ORYSJ1.925e-1338.32Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL14_ORYSJ4.101e-1332.21Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL124_ORYSJ6.995e-1340.00Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL111_ORYSJ1.193e-1232.54Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL11_ARATH2.658e-1232.39Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GL81_ORYSJ1.639e-1142.31Putative germin-like protein 8-1 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-068-C12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664598 ID=EY664598; Name=EY664598; organism=Citrus sinensis; type=EST; length=829bp
CTGAATTTAACCACAAAGGCTTCACATTCTGTTCTTCTTCCTTGCTTTCA
TATCCTCTTCCTACAATGCTATGGTTAACGACTTCTGCGTGCCTGACCTA
AAGCTGACGGATAGTCCCGCCGGCTATCCTTGCGTGCCCCCCGCTCATGG
TTACCGATGACCACTTCTTATTTTCGGGCCTCGGCGTGGCCGGAAACACC
ACAAGCATTATCAACGCCGCAATGACACCTGCATTTGGAGCTCAATTTCC
GGCCGTGAATGGGCTCGGACTCTCCTTGGCACGCCTATATCTTGCAAAGG
GAGGGGTAATCCCAATCCACACTCATCCAGCTGCTTCCGAAATCCTTCTT
GTTGTGCATGGCTGCATAACTGACGGGTTCATTTCCTCTTCAGCTAACAC
TGGGTACGTAAAGACGCTTAAGAAGGGAGATATCATGATCTTTCCACAAG
GGTAGCAGCATTATCAAGTAAATGCCAGTGCGGACGGAGCCCTCGGGTTT
GATAGCTTCAACAGCCCGAATACTGTACTCCAAATCACCGATTTCAGCTT
ATTCGCTAACAACTTGTCTTCCCAATTGGAGGAGCAAACCACTTTCCTTG
ACGATGCTACGGTGAAGAGGCTCAAGGCTATCCTTGGTGGCACCGGCTAC
GCTTATTACTTACCACATTCTTCATTTGTAGATCTGAGTTCTTAATTNCA
TTAATTGCTAATGTTGGTGATTGTTGGAATTCACGAGTTATGATAATATG
CTGTCACTACCCATATCTTTTCTTCTGATAAATAAATCTCTCTCAAAAAA
AAAAAAAAAGGAGGCCGCTCTANAGATTC
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