CX671984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_HAEI8 (Malate dehydrogenase OS=Haemophilus influenzae (strain 86-028NP) GN=mdh PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.639e-42 Identity = 93/179 (51.96%), Postives = 119/179 (66.48%), Query Frame = -1 Query: 304 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 840 KK G YD ++L GVT LDV+R+ TFVAE+ GL+ VPV+GGH+GVTILPLLSQV+ EI+ L RIQN GTEVV AKAG GSATLSMA AAA+FA + ++GL G+ +V+EC YV FF+ VRLG+ +EEI +GPL+ +E+ LE L I+ G F+ Sbjct: 133 KKAGVYDKRKLFGVTTLDVLRSETFVAELKGLNVSRTSVPVIGGHSGVTILPLLSQVQ-YAKWNEDEIEPLAKRIQNAGTEVVNAKAGGGSATLSMAQAAARFARSLVKGLSGE-TVVECTYVEGDGKYARFFSQPVRLGKEGVEEILPIGPLSNFEQQALENMLPTLRADIELGEKFI 309
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_SHEWM (Malate dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=mdh PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 90/180 (50.00%), Postives = 120/180 (66.67%), Query Frame = -1 Query: 301 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 840 K G YD RL GVT LDV+R+ TFVAE GL+ +V+V V+GGH+GVTILPLLSQ++ S + E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+V+ECAYV FFA + LG+ +E++ + G ++E+E + L I+ GV FV+ Sbjct: 133 KAAGVYDKNRLFGVTTLDVIRSETFVAEAKGLNVADVNVNVIGGHSGVTILPLLSQIE-GVSFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHAEFFAQPILLGKNGVEKVLAYGDVSEFEANARDAMLDTLNADIKLGVEFVK 311
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_SHELP (Malate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=mdh PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 92/180 (51.11%), Postives = 118/180 (65.56%), Query Frame = -1 Query: 301 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 840 K G YD RL GVT LDV+R+ TFVAE GL+ +V V V+GGH+GVTILPLLSQ++ S + E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+V+ECAYV FFA V LG+ IE++ + G ++E+E + L I GV FV+ Sbjct: 133 KAAGVYDKNRLFGVTTLDVIRSETFVAEAKGLNVADVKVNVIGGHSGVTILPLLSQIE-GVSFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHADFFAQPVLLGKNGIEQVLAYGEVSEFEANARDAMLDTLKADITLGVDFVK 311
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_SHEB9 (Malate dehydrogenase OS=Shewanella baltica (strain OS195) GN=mdh PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 90/180 (50.00%), Postives = 119/180 (66.11%), Query Frame = -1 Query: 301 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 840 KK G YD RL G+T LDV+R+ TF+AE+ L+ +V V V+GGH+GVTILPLLSQV+ + T E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+++ECAYV FFA V LG+ IE++ G ++ +E + L G I+ GV FV+ Sbjct: 133 KKAGVYDKNRLFGITTLDVIRSETFIAELKSLNVADVKVNVIGGHSGVTILPLLSQVE-GVTFTDEEVASLTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANIVECAYVDGGSEHAEFFAQPVLLGKNGIEKVLPYGEVSAFEANARDSMLDTLKGDIKLGVDFVK 311
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_PHOPR (Malate dehydrogenase OS=Photobacterium profundum GN=mdh PE=3 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 89/181 (49.17%), Postives = 114/181 (62.98%), Query Frame = -1 Query: 298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840 KK G YD +RL G+T LD++R+ TFVAE+ G P ++ VPV+GGH+GVTILPLLSQV+ + EI LT RIQN GTEVVEAKAG GSATLSM AA +F + +R L+G+ ++ECAYV FFA V LG+ +EE+ G L+ +E+ L L I G F K Sbjct: 133 KKAGVYDKRRLFGITTLDIIRSETFVAELKGKTPSDIQVPVIGGHSGVTILPLLSQVE-GVEFSDEEIKALTPRIQNAGTEVVEAKAGGGSATLSMGQAAYRFGLSLVRALQGEQGIVECAYVEGDGKHARFFAQPVLLGKDGVEEVIDYGKLSTFEQEALNNMLDTLTSDITLGEEFAAK 312
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_HAES2 (Malate dehydrogenase OS=Haemophilus somnus (strain 2336) GN=mdh PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 96/179 (53.63%), Postives = 121/179 (67.60%), Query Frame = -1 Query: 304 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 840 KK G YD ++L GVT LDV+R+ TFVAE+ GL+ + VPV+GGH+GVTILPLLSQV+ + EI LT RIQN GTEVVEAKAG GSATLSMA AAA+FA + ++GL G+ +V+EC YV FFA VRLG+ +EEI +G L+ +E+ LE L I+ G FV Sbjct: 133 KKAGVYDKRKLFGVTTLDVLRSETFVAELKGLNVSRIAVPVIGGHSGVTILPLLSQVQYT-EWKEDEIAPLTKRIQNAGTEVVEAKAGGGSATLSMAQAAARFALSLVQGLSGE-TVVECTYVEGDGKYARFFAQPVRLGKEGVEEILPVGTLSAFEQKALEDMLPTLRADIELGEKFV 309
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_HAES1 (Malate dehydrogenase OS=Haemophilus somnus (strain 129Pt) GN=mdh PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 96/179 (53.63%), Postives = 120/179 (67.04%), Query Frame = -1 Query: 304 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 840 KK G YD ++L GVT LDV+R+ TFVAE+ GL+ + VPV+GGH+GVTILPLLSQV+ EI LT RIQN GTEVVEAKAG GSATLSMA AAA+FA + ++GL G+ +V+EC YV FFA VRLG+ +EEI +G L+ +E+ LE L I+ G FV Sbjct: 133 KKAGVYDKRKLFGVTTLDVLRSETFVAELKGLNVSRIAVPVIGGHSGVTILPLLSQVQ-YAEWEEDEIAPLTKRIQNAGTEVVEAKAGGGSATLSMAQAAARFALSLVQGLSGE-TVVECTYVEGDGKYARFFAQPVRLGKEGVEEILPVGTLSAFEQKALEDMLPTLRADIELGEKFV 309
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ALISL (Malate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=mdh PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.641e-41 Identity = 90/180 (50.00%), Postives = 116/180 (64.44%), Query Frame = -1 Query: 301 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 840 KK G YD +L GVT LDV+R+ TFVAE+ G +P E+ VPV+GGH+GVTILPLLSQV+ T E+ LT RIQN GTEVVEAKAG GSATLSM AA +F + ++ L G+ V+ECAYV FFA + LG+ +EEI G L+ +E+ L+ L I+ G F++ Sbjct: 133 KKAGVYDKNKLFGVTTLDVIRSETFVAELKGKNPGEICVPVIGGHSGVTILPLLSQVE-GVEFTAEEVAALTPRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVKALSGEKGVVECAYVEGNGEHARFFAQPILLGKNGVEEIQHYGELSTFEQDALDSMLDTLKADIKIGEEFIK 311
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_SHEFN (Malate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=mdh PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.799e-41 Identity = 88/180 (48.89%), Postives = 119/180 (66.11%), Query Frame = -1 Query: 301 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 840 K G YD RL G+T LDV+R+ TF+AE+ GL+ +V V V+GGH+GVTILPLLSQV+ + T E+ +T RIQN GTEVVEAKAG GSATLSM AA +F + +RGL+G+A+V+ECAYV FFA + LG+ +E++ G ++ +E + L G I+ GV FV+ Sbjct: 133 KNAGVYDKNRLFGITTLDVIRSETFIAELKGLNVADVKVNVIGGHSGVTILPLLSQVE-GVTFTDEEVAAMTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANVVECAYVDGGSEHATFFAQPILLGKNGVEKVLPYGEISAFEANARDAMLDTLKGDIKLGVEFVK 311
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_SALMU (Malate dehydrogenase (Fragment) OS=Salmonella muenchen GN=mdh PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.799e-41 Identity = 89/162 (54.94%), Postives = 113/162 (69.75%), Query Frame = -1 Query: 355 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLE 840 KK G YD +L GVT LD++R+NTFVAE+ G P EV+VPV+GGH+GVTILPLLSQ+ P S T E LT RIQN GTEVVEAKAG GSATLSM AAA+F + +R L+G+ V+ECAYV FF+ + LG+ +EE S+G L+ +E+ L+ Sbjct: 122 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKDVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLD 282 The following BLAST results are available for this feature:
BLAST of CX671984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 154
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671984 ID=CX671984; Name=CX671984; organism=Citrus sinensis; type=EST; length=843bpback to top |