CX671984

Overview
NameCX671984
Unique NameCX671984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ECOHS (Malate dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=mdh PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ECODH (Malate dehydrogenase OS=Escherichia coli (strain K12 / DH10B) GN=mdh PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ECOBW (Malate dehydrogenase OS=Escherichia coli (strain K12 / BW2952) GN=mdh PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ECO81 (Malate dehydrogenase OS=Escherichia coli O81 (strain ED1a) GN=mdh PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ECO5E (Malate dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ECO57 (Malate dehydrogenase OS=Escherichia coli O157:H7 GN=mdh PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ECO45 (Malate dehydrogenase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ECO27 (Malate dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_ECO24 (Malate dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=mdh PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.613e-44
Identity = 97/181 (53.59%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQV P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_SALNS (Malate dehydrogenase OS=Salmonella newport (strain SL254) GN=mdh PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.868e-44
Identity = 95/181 (52.49%), Postives = 120/181 (66.30%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P EV+VPV+GGH+GVTILPLLSQ+ P  S T  E   LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  L+     L   IQ G  F+ K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKRPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQHSLDAMLDTLKKDIQLGEDFINK 312
The following BLAST results are available for this feature:
BLAST of CX671984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDH_ECOHS4.613e-4453.59Malate dehydrogenase OS=Escherichia coli O9:H4 (st... [more]
MDH_ECODH4.613e-4453.59Malate dehydrogenase OS=Escherichia coli (strain K... [more]
MDH_ECOBW4.613e-4453.59Malate dehydrogenase OS=Escherichia coli (strain K... [more]
MDH_ECO814.613e-4453.59Malate dehydrogenase OS=Escherichia coli O81 (stra... [more]
MDH_ECO5E4.613e-4453.59Malate dehydrogenase OS=Escherichia coli O157:H7 (... [more]
MDH_ECO574.613e-4453.59Malate dehydrogenase OS=Escherichia coli O157:H7 G... [more]
MDH_ECO454.613e-4453.59Malate dehydrogenase OS=Escherichia coli O45:K1 (s... [more]
MDH_ECO274.613e-4453.59Malate dehydrogenase OS=Escherichia coli O127:H6 (... [more]
MDH_ECO244.613e-4453.59Malate dehydrogenase OS=Escherichia coli O139:H28 ... [more]
MDH_SALNS7.868e-4452.49Malate dehydrogenase OS=Salmonella newport (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C08-E16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671984 ID=CX671984; Name=CX671984; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTGGCAGAAGTATGAACTCTGATTTTGAATTGATTAAA
ATGATAAGACAGGCGGCAGTTCGTCATCTACATATTCTTTATCCATTCAT
TACAAGAATATCAAAAGAACCAAACCAACCCCACAAAGATGAATCTTTTG
CTTCTTCTTTGTACCTAACTTAATTCCATCTGATTATGGAAAAACGAAAA
CCCTACCTCTTATTCTGGGGAAAGTAATCTTGAGATATTTGAGGCAAACA
ACAAAAGCACAACCATTATCATTAGTCACCATGTGATTGGTTACTCATTT
CCTGACAAAACTGACTCCCTTCTGAATGCTTCCCGCTAACTCTTTCTTTG
CCTTCTCCAAACCAGCCCTCTCATACTCATTCAATGGGCCAAGTGAGTAA
ATTTCCTCAATTCTAGCACGGCCAAGCCGTACCTTGGATGCAAAGAAAGG
GAGTTCAGTCACCGTAGAAGCCACGTATGCACACTCAATAACACTGGCAT
CCCCCCTCAAACCTCGGAGACAAGCATCTGCAAACTTGGCAGCAGCATAT
GCCATGGATAGAGTGGCCGAACCAGCTCCAGCTTTTGCCTCAACTACTTC
TGTACCACCATTCTGGATACGATCTGTCAAGTAGTCAATTTCTGTAGGGG
TGAGAGAGCATGATGGTTTAACCTGAGATAAAAGAGGTAAAATAGTAACC
CCAGCATGACCTCCCACAACTGGAACATCAACTTCCCTGGGGTCAAGACC
CAAGACCTCAGCCACAAAAGTATTGGCTCGAACAACATCAAGCATTGTGA
CTCCCAAAAGTCGCTTTGGATCATAAGTGCCAACTTTCTTGAA
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