CX671984

Overview
NameCX671984
Unique NameCX671984
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13690 contig Csv1_Contig13690:16..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_YERPG (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=mdh PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43
Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+  + E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_YERPE (Malate dehydrogenase OS=Yersinia pestis GN=mdh PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43
Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+  + E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_YERPB (Malate dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=mdh PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43
Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+  + E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_YERPA (Malate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=mdh PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43
Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+  + E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_YERP3 (Malate dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=mdh PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43
Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+  + E   +G L+ +E+  LE     L   I+ G  FV +
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKNGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEKFVNQ 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_YERE8 (Malate dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=mdh PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43
Identity = 90/180 (50.00%), Postives = 121/180 (67.22%), Query Frame = -1 
Query:  301 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 840
            KK G YD  +L G+T LD +R+NTFVAE+ G  P++++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+++V+EC+YV        FFA  + LG+  + E   +G L+ +E+  LE     L   I+ G  FV+
Sbjct:  133 KKAGVYDKNKLFGITTLDTIRSNTFVAELKGKQPQDIEVPVIGGHSGVTILPLLSQI-PGISFTEQEVIDLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGESNVVECSYVEGDGKYARFFAQPILLGKDGVAERKDIGKLSAFEQQALENMLDVLHKDIELGEQFVK 311
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_SERP5 (Malate dehydrogenase OS=Serratia proteamaculans (strain 568) GN=mdh PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.700e-43
Identity = 92/179 (51.40%), Postives = 119/179 (66.48%), Query Frame = -1 
Query:  304 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFV 840
            KK G YD  +L GVT LD++R+NTFVAE+ G  P E++VPV+GGH+GVTILPLLSQ+ P  S T  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R L+G+  V+ECAYV        FFA  + LG+  +EE   +G L+ +E+  L+     L   I+ G  F+
Sbjct:  133 KKAGVYDKNKLFGVTSLDIIRSNTFVAELKGKQPEELNVPVIGGHSGVTILPLLSQI-PGVSFTDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKGVVECAYVEGDGKYARFFAQPLVLGKNGVEERKDIGTLSAFEQKALDDMLDVLHKDIELGEKFI 310
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_KLEP7 (Malate dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mdh PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.136e-42
Identity = 94/181 (51.93%), Postives = 119/181 (65.75%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G    EV+VPV+GGH+GVTILPLLSQ+ P  S +  EI  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R ++G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKSATEVEVPVIGGHSGVTILPLLSQI-PGVSFSDQEIADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRAMQGEKGVVECAYVEGDGHYARFFSQPLLLGKNGVEERQSIGKLSAFEQQALEGMLDTLKKDIALGEDFVNK 312
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_AERS4 (Malate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=mdh PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.136e-42
Identity = 92/180 (51.11%), Postives = 120/180 (66.67%), Query Frame = -1 
Query:  301 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVR 840
            KK G YD +RL GVT LDV+RA TFVA+  GL+  +V V V+GGH+GVTILPLLSQ++   S +  E+  +T RIQN GTEVVEAKAG GSATLSM  AA +F  + ++GL+G+A+VIECAYV        FFA  + LG+  +E +   G L+ +E+  +E     L   IQ GV FV+
Sbjct:  133 KKAGVYDKRRLFGVTTLDVIRAETFVADAKGLNVDKVRVNVIGGHSGVTILPLLSQIE-GASFSAEEVAAMTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLIKGLQGEANVIECAYVEGDGKHATFFAQPILLGKNGVETVLDYGKLSAFEQEAMEGMLATLKADIQLGVEFVK 311
[Close]
BLAST of CX671984 vs. ExPASy Swiss-Prot
Match: MDH_KLEP3 (Malate dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=mdh PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.484e-42
Identity = 93/181 (51.38%), Postives = 119/181 (65.75%), Query Frame = -1 
Query:  298 KKVGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPSCSLTPTEIDYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDASVIECAYVASTVTELPFFASKVRLGRARIEEIYSLGPLNEYERAGLEKAKKELAGSIQKGVSFVRK 840
            KK G YD  +L GVT LD++R+NTFVAE+ G    EV+VPV+GGH+GVTILPLLSQ+ P  S +  E+  LT RIQN GTEVVEAKAG GSATLSM  AAA+F  + +R ++G+  V+ECAYV        FF+  + LG+  +EE  S+G L+ +E+  LE     L   I  G  FV K
Sbjct:  133 KKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKSATEVEVPVIGGHSGVTILPLLSQI-PGVSFSDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRAMQGEKGVVECAYVEGDGHYARFFSQPLLLGKNGVEERQSIGKLSAFEQQALEGMLDTLKKDIALGEDFVNK 312
The following BLAST results are available for this feature:
BLAST of CX671984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
MDH_YERPG8.700e-4349.72Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERPE8.700e-4349.72Malate dehydrogenase OS=Yersinia pestis GN=mdh PE=... [more]
MDH_YERPB8.700e-4349.72Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_YERPA8.700e-4349.72Malate dehydrogenase OS=Yersinia pestis bv. Antiqu... [more]
MDH_YERP38.700e-4349.72Malate dehydrogenase OS=Yersinia pseudotuberculosi... [more]
MDH_YERE88.700e-4350.00Malate dehydrogenase OS=Yersinia enterocolitica se... [more]
MDH_SERP58.700e-4351.40Malate dehydrogenase OS=Serratia proteamaculans (s... [more]
MDH_KLEP71.136e-4251.93Malate dehydrogenase OS=Klebsiella pneumoniae subs... [more]
MDH_AERS41.136e-4251.11Malate dehydrogenase OS=Aeromonas salmonicida (str... [more]
MDH_KLEP31.484e-4251.38Malate dehydrogenase OS=Klebsiella pneumoniae (str... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C08-E16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671984 ID=CX671984; Name=CX671984; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTGGCAGAAGTATGAACTCTGATTTTGAATTGATTAAA
ATGATAAGACAGGCGGCAGTTCGTCATCTACATATTCTTTATCCATTCAT
TACAAGAATATCAAAAGAACCAAACCAACCCCACAAAGATGAATCTTTTG
CTTCTTCTTTGTACCTAACTTAATTCCATCTGATTATGGAAAAACGAAAA
CCCTACCTCTTATTCTGGGGAAAGTAATCTTGAGATATTTGAGGCAAACA
ACAAAAGCACAACCATTATCATTAGTCACCATGTGATTGGTTACTCATTT
CCTGACAAAACTGACTCCCTTCTGAATGCTTCCCGCTAACTCTTTCTTTG
CCTTCTCCAAACCAGCCCTCTCATACTCATTCAATGGGCCAAGTGAGTAA
ATTTCCTCAATTCTAGCACGGCCAAGCCGTACCTTGGATGCAAAGAAAGG
GAGTTCAGTCACCGTAGAAGCCACGTATGCACACTCAATAACACTGGCAT
CCCCCCTCAAACCTCGGAGACAAGCATCTGCAAACTTGGCAGCAGCATAT
GCCATGGATAGAGTGGCCGAACCAGCTCCAGCTTTTGCCTCAACTACTTC
TGTACCACCATTCTGGATACGATCTGTCAAGTAGTCAATTTCTGTAGGGG
TGAGAGAGCATGATGGTTTAACCTGAGATAAAAGAGGTAAAATAGTAACC
CCAGCATGACCTCCCACAACTGGAACATCAACTTCCCTGGGGTCAAGACC
CAAGACCTCAGCCACAAAAGTATTGGCTCGAACAACATCAAGCATTGTGA
CTCCCAAAAGTCGCTTTGGATCATAAGTGCCAACTTTCTTGAA
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