CX671975

Overview
NameCX671975
Unique NameCX671975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: YDIU_ECO7I (UPF0061 protein ydiU OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=ydiU PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.438e-27
Identity = 69/135 (51.11%), Postives = 85/135 (62.96%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            YT +SP+  +   +L+  +  +A++L +    F+       + G T L G  P AQ Y GHQFG+WAGQLGDGR I LGE         +  LKGAG TPYSR  DG AVLRS+IRE L SEAMH+LGIPTTRAL
Sbjct:   17 YTALSPTP-LNKARLIWHNAELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQQLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRAL 148          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y3983_SHEHH (UPF0061 protein Shal_3983 OS=Shewanella halifaxensis (strain HAW-EB4) GN=Shal_3983 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.438e-27
Identity = 72/143 (50.35%), Postives = 89/143 (62.24%), Query Frame = 3
Query:  354 EVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLF--FSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            E L   Y++V P   + NP  +AWSE  A  + L      +P   L    SG   + GA  YAQ Y GHQFG ++ QLGDGR+I LGE L  +   W++ LKGAG TPYSR  DG AV+RS++REFL SEA+H L IPTTRAL
Sbjct:    9 EQLVGYYSQVFPQG-ISNPHWLAWSEDAAGLIGLT-----QPTDELLQGMSGNAQIDGASYYAQVYSGHQFGGYSPQLGDGRSIILGEALGPQGT-WDVALKGAGPTPYSRHGDGRAVMRSAVREFLISEALHHLHIPTTRAL 144          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y5348_METC4 (UPF0061 protein Mchl_5348 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=Mchl_5348 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.491e-27
Identity = 67/135 (49.63%), Postives = 88/135 (65.19%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            + +V+P+A VE P+L+  + ++A  L LDP   E P+     +G     GA P A  Y GHQFG +  QLGDGRAI LGE++  +  R ++QLKG+G TP+SR  DG A L   +RE+L SEAMH LGIPTTRAL
Sbjct:   19 FGRVAPTA-VEAPRLIRLNRALAVDLGLDPDRLESPEGVEVLAGQRVPEGAEPLAAAYAGHQFGQFVPQLGDGRAILLGEVVG-RDGRRDIQLKGSGPTPFSRRGDGRAALGPVLREYLVSEAMHALGIPTTRAL 151          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y4863_METEP (UPF0061 protein Mext_4863 OS=Methylobacterium extorquens (strain PA1) GN=Mext_4863 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.491e-27
Identity = 67/135 (49.63%), Postives = 88/135 (65.19%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            + +V+P+A VE P+L+  + ++A  L LDP   E P+     +G     GA P A  Y GHQFG +  QLGDGRAI LGE++  +  R ++QLKG+G TP+SR  DG A L   +RE+L SEAMH LGIPTTRAL
Sbjct:   19 FGRVAPTA-VEAPRLIRLNRALAVDLGLDPDRLESPEGVEVLAGQRVPEGAEPLAAAYAGHQFGQFVPQLGDGRAILLGEVVG-RDGRRDIQLKGSGPTPFSRRGDGRAALGPVLREYLVSEAMHALGIPTTRAL 151          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y039_VIBVU (UPF0061 protein VV1_0039 OS=Vibrio vulnificus GN=VV1_0039 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.491e-27
Identity = 65/135 (48.15%), Postives = 86/135 (63.70%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            Y  V+P   ++N + V W+  +A    L PK  + P     FSGA P +   P A  Y GHQFG++   LGDGR + LGE+ N + + +++ LKGAG TP+SR  DG AVLRS++RE+LCSEAM  LGI TTRAL
Sbjct:   21 YRLVTPQP-LDNNRWVIWNGELAQGFAL-PKHADDPQLLSVFSGAEPFSAFKPLAMKYAGHQFGVYNPDLGDGRGLLLGEMQNQQGQWFDIHLKGAGLTPFSRMGDGRAVLRSTLREYLCSEAMAALGIETTRAL 153          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y4127_AERHH (UPF0061 protein AHA_4127 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=AHA_4127 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.865e-27
Identity = 60/89 (67.42%), Postives = 68/89 (76.40%), Query Frame = 3
Query:  510 PLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            PL G  P AQ Y GHQFG ++ +LGDGRA+ LGE       RW+L LKGAGKTP+SRF DG AVLRSSIRE+L SEA+H LGIPTTRAL
Sbjct:   58 PLPGMQPVAQVYAGHQFGGYSPRLGDGRALLLGEQQAPDGSRWDLHLKGAGKTPFSRFGDGRAVLRSSIREYLASEALHALGIPTTRAL 146          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y1414_CLOBB (UPF0061 protein CLL_A1414 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=CLL_A1414 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.865e-27
Identity = 65/135 (48.15%), Postives = 91/135 (67.41%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            +++ +PS EV++ +L  ++ES+A  L L  +  +  D   FF+G   L G VP AQ Y GHQFG +   LGDGRAI +GE+ +   ER+++QLKGAG+TPYSR  DG A L   +RE++ SE M+ LGIPTTR+L
Sbjct:   26 FSEQNPS-EVKSAKLEVFNESLASDLGLSEEFLQSDDGVAFFAGNKILEGTVPIAQAYAGHQFGHFT-MLGDGRAILIGELKSQNGERFDIQLKGAGRTPYSRGGDGKATLGPMLREYIISEGMYGLGIPTTRSL 158          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y262_SHELP (UPF0061 protein Shew_0262 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=Shew_0262 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.660e-27
Identity = 70/141 (49.65%), Postives = 90/141 (63.83%), Query Frame = 3
Query:  360 LHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLF--FSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            L   Y++V+P   +  PQ +AWSE  A  + L     ++PD  L    +G   + GA  YAQ Y GHQFG ++ QLGDGR+I LGE    +   W++ LKGAG TPYSR  DG AV+RS++REFL SEA+H L IPTTRAL
Sbjct:   11 LSGFYSQVTPQG-LPRPQWLAWSEDAAALIGL-----KQPDDELLQGLAGNQAIPGASYYAQVYSGHQFGGYSPQLGDGRSIILGEAEGPQGY-WDVALKGAGMTPYSRHGDGRAVMRSAVREFLVSEALHHLNIPTTRAL 144          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y1802_JANSC (UPF0061 protein Jann_1802 OS=Jannaschia sp. (strain CCS1) GN=Jann_1802 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.000e-26
Identity = 66/135 (48.89%), Postives = 87/135 (64.44%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            +T++SP    E P L+A +  +A+ L +   E +     LF     P+ GA P AQ Y GHQFG W+ QLGDGRA+ LGE++     R+++QLKGAG+TPYSR  DG A L   +RE++ SEAM  LGIPTTRAL
Sbjct:   19 FTRMSPKPVAE-PGLIAVNRPLAERLGITLGESDAELAQLFAGNVVPM-GAAPLAQVYAGHQFGGWSQQLGDGRAVMLGEVVAPDGARFDVQLKGAGQTPYSRMGDGRAWLGPVLREYIVSEAMAALGIPTTRAL 151          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y1157_DINSH (UPF0061 protein Dshi_1157 OS=Dinoroseobacter shibae (strain DFL 12) GN=Dshi_1157 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.000e-26
Identity = 68/149 (45.64%), Postives = 89/149 (59.73%), Query Frame = 3
Query:  345 IPREVLHAC-----YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            IP E  +A      + +++P+  V  P L+  +  +A  L LDP   E P+     +G     GAVP AQ Y GHQFG W  QLGDGRAI LGE+ +      ++QLKG+G TP+SR  DG A L   +RE++ SEAMH LG+PTTRAL
Sbjct:    5 IPFEARYAALPDRFHAQLAPTP-VSAPGLIKVNHRLARELGLDPAALESPEGVAMLAGNAVPEGAVPIAQAYAGHQFGGWNPQLGDGRAILLGELRHADGALRDVQLKGSGPTPFSRMGDGRAGLGPVLREYILSEAMHALGVPTTRAL 152          
The following BLAST results are available for this feature:
BLAST of CX671975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
YDIU_ECO7I3.438e-2751.11UPF0061 protein ydiU OS=Escherichia coli O7:K1 (st... [more]
Y3983_SHEHH3.438e-2750.35UPF0061 protein Shal_3983 OS=Shewanella halifaxens... [more]
Y5348_METC44.491e-2749.63UPF0061 protein Mchl_5348 OS=Methylobacterium chlo... [more]
Y4863_METEP4.491e-2749.63UPF0061 protein Mext_4863 OS=Methylobacterium exto... [more]
Y039_VIBVU4.491e-2748.15UPF0061 protein VV1_0039 OS=Vibrio vulnificus GN=V... [more]
Y4127_AERHH5.865e-2767.42UPF0061 protein AHA_4127 OS=Aeromonas hydrophila s... [more]
Y1414_CLOBB5.865e-2748.15UPF0061 protein CLL_A1414 OS=Clostridium botulinum... [more]
Y262_SHELP7.660e-2749.65UPF0061 protein Shew_0262 OS=Shewanella loihica (s... [more]
Y1802_JANSC1.000e-2648.89UPF0061 protein Jann_1802 OS=Jannaschia sp. (strai... [more]
Y1157_DINSH1.000e-2645.64UPF0061 protein Dshi_1157 OS=Dinoroseobacter shiba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C03-E6-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671975 ID=CX671975; Name=CX671975; organism=Citrus sinensis; type=EST; length=781bp
CTAAACCACACCTCCTCTTCTCTTCACTCTCTTCTTCTTCTTCTTCTCTC
CGCCCTCGCCTCCCCAAATTCCCGTTCTACCCCGCCTACTTTACAAAGTC
TCCATCCTGTCCTTCCATCGCATGCCACGTCAGCACGACAGGCGGCGGCG
GTGCTGCGCAGATGGAGTCGAGTGCGTCTGTCGATTCGGTGACGCATGAT
TTGAAGAATCAGAGATTGGATACGGAAACGGAAACGGACGGCGGAGATGA
GAGCAAGATGACGAAGAAGCTGAAAGCTCTTGAGGATCTGAATTGGGACC
ACTCGTTTGTTCGAGAGTTGCCTGGTGATCCCAGGACTGATTCTATCCCT
CGTGAGGTATTGCATGCCTGTTATACTAAAGTTTCTCCGTCAGCTGAAGT
AGAAAATCCTCAGCTTGTTGCGTGGTCAGAATCAGTGGCCGATTCTCTTG
AGTTGGATCCTAAAGAATTTGAAAGACCAGATTTTCCCCTCTTTTTTTCT
GGGGCTACTCCTTTGGCGGGAGCGGTGCCATATGCTCAATGCTACGGTGG
ACATCAATTTGGCATGTGGGCTGGTCAGCTGGGTGATGGTCGGGCAATAA
CTCTTGGCGAGATCCTGAATTTGAAGTCGGAAAGGTGGGAATTGCAGCTT
AAAGGAGCTGGGAAGACTCCATATAGCCGCTTTGCTGATGGCCTTGCAGT
ACTGCGTAGTAGCATCAGGGAGTTCCTTTGCAGTGAAGCCATGCACTTTT
TAGGAATCCCAACAACTCGTGCACTTTGTCT
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