CX671975

Overview
NameCX671975
Unique NameCX671975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y997_CLOPH (UPF0061 protein Cphy_0997 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=Cphy_0997 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 64/135 (47.41%), Postives = 87/135 (64.44%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            YT+  PS +V +P+LV W+ ++A  L LD   F+  +  L  SG   L    P A+ Y GHQFG +   LGDGRA+ LGEI+    ER+++QLKG+G+TPYSR  DG A L   +RE++ SE M  LGIP+TR+L
Sbjct:   19 YTEQLPS-KVPSPKLVKWNSTLAKELGLDSDFFQSEEGALVLSGNQILEDTTPIAEAYAGHQFGYFT-MLGDGRAVLLGEIVTNDEERYDIQLKGSGRTPYSRGGDGKATLGPMLREYIISEGMKGLGIPSTRSL 151          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y585_METCA (UPF0061 protein MCA0585 OS=Methylococcus capsulatus GN=MCA0585 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 64/129 (49.61%), Postives = 79/129 (61.24%), Query Frame = 3
Query:  390 SAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            +  +  P++V ++ ++A  L   P+    P      +G  P  G    A  Y GHQFG W  QLGDGRA+ + E+     ER ELQLKGAG TPYSR  DG AVLRSSIRE+L SEAMH LG+PTTR L
Sbjct:   37 ATSLPEPRMVHFNAALAGELGFGPEA--GPQLLEILAGNRPWPGYASSASVYAGHQFGAWVPQLGDGRALLIAEVRTPARERVELQLKGAGPTPYSRGLDGRAVLRSSIREYLASEAMHALGVPTTRCL 163          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y577_RHOSR (UPF0061 protein RHA1_ro00577 OS=Rhodococcus sp. (strain RHA1) GN=RHA1_ro00577 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 64/128 (50.00%), Postives = 82/128 (64.06%), Query Frame = 3
Query:  393 AEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            A   +P L+  +E +A SL LD +     D     SG+T  AGA P A  Y GHQFG +A  LGDGRA+ LGE+ +   +R +L LKG+G TP+SR  DG AV+   +RE+L SEAM+ LGIPTTRAL
Sbjct:   48 AHAPDPTLLVLNEQLAASLRLDVQTLRSEDGVGVLSGSTAPAGAKPVAMAYAGHQFGGYAPLLGDGRALLLGELTSSDGQRVDLHLKGSGPTPFSRGGDGFAVIGPMLREYLVSEAMYALGIPTTRAL 175          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y1334_CLOBA (UPF0061 protein CLH_1334 OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=CLH_1334 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26
Identity = 65/135 (48.15%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            +++ +PS EV +  LV ++ES+A  L L  +  +  D   F SG   L   +P AQ Y GHQFG +   LGDGRAI LGE+ +   ER+++QLKG+G+TPYSR  DG A L + +RE++ SE MH LGIPTTR+L
Sbjct:   26 FSEQNPS-EVPSTNLVVFNESLASDLGLSEEFLQSDDGINFLSGNKILEDTIPIAQAYAGHQFGHFT-MLGDGRAILLGELKSQNGERFDIQLKGSGRTPYSRGGDGKATLGAMLREYIISEGMHGLGIPTTRSL 158          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y3358_BRASO (UPF0061 protein BRADO3358 OS=Bradyrhizobium sp. (strain ORS278) GN=BRADO3358 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.229e-26
Identity = 62/135 (45.93%), Postives = 87/135 (64.44%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            + +V+P+  V  P+L+  +  +A+ L L+P E E P+     +G T   GA P A  Y GHQFG +  QLGDGRA+ LGE+++    R ++QLKG+G TP+SR  DG A L   +RE++ SEAM  LGIPTTR+L
Sbjct:   19 FARVAPTP-VAAPRLIKLNRPLAEELGLNPAELETPEGAEILAGKTVPEGAEPIAMAYAGHQFGHFVPQLGDGRAVLLGEVVDRNGVRRDIQLKGSGPTPFSRRGDGRAALGPVLREYIVSEAMAALGIPTTRSL 152          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y4142_BRAJA (UPF0061 protein bll4142 OS=Bradyrhizobium japonicum GN=bll4142 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.911e-26
Identity = 63/135 (46.67%), Postives = 86/135 (63.70%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            + +V+P+  V  P+L+  +  +A  L LDP   E P+     +G T   GA P A  Y GHQFG +  QLGDGRAI LGE+++    R ++QLKG+G TP+SR  DG A L   +RE++ SEAM+ LGIPTTR+L
Sbjct:   19 FARVAPTP-VAAPRLIKLNRPLAVQLGLDPNMLETPEGAEILAGKTVPDGADPIAMAYAGHQFGQFVPQLGDGRAILLGEVIDRDGVRRDIQLKGSGPTPFSRRGDGRAALGPVLREYIVSEAMYALGIPTTRSL 152          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y945_NITWN (UPF0061 protein Nwi_0945 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=Nwi_0945 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.802e-26
Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 3
Query:  366 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            A Y +V P+A V  P+L+  ++++A  L +DP   + P      SG     G+ P AQ Y GHQFG +  QLGDGRAI LGE+++   +R+++QLKG+G+T +SR  DG A +   IRE++ SEAM  LGIPTTR+L
Sbjct:   31 AFYERVKPAA-VAAPRLLRVNDALARQLRIDPAFLKSPQGVAVLSGNEIAPGSDPIAQAYAGHQFGSFVPQLGDGRAILLGEVVDAAGKRFDIQLKGSGRTRFSRRGDGRAAIGPVIREYIVSEAMAALGIPTTRSL 166          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y330_SHEON (UPF0061 protein SO_0330 OS=Shewanella oneidensis GN=SO_0330 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.802e-26
Identity = 66/137 (48.18%), Postives = 86/137 (62.77%), Query Frame = 3
Query:  372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLF--FSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            Y++V P   + NP  +AWS+  A  + L      +P   L    SG   + GA  YAQ Y GHQFG +  +LGDGR+I LGE +   +  W++ LKG G TPYSR  DG AV+RS++REFL SEA+H LG+PTTRAL
Sbjct:   15 YSQVYPQG-ISNPHWLAWSDDAAALIGL-----HQPTDELLQGLSGNAAVEGASYYAQVYSGHQFGGYTPRLGDGRSIILGEAIG-PNGAWDVALKGGGPTPYSRHGDGRAVMRSAVREFLVSEALHHLGVPTTRAL 144          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y945_AGRT5 (UPF0061 protein Atu0945 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu0945 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.485e-26
Identity = 60/126 (47.62%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  399 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            V+ P+L+A++ ++A+ L LD  + +       FSG     GA P A  Y GHQFG +  QLGDGRAI LGE++++   R ++QLKG+G TP+SR  DG A L   +RE++ SEAM  LGIP TRAL
Sbjct:   24 VKAPRLIAFNRTLAEELLLDVADLDDDRLAAIFSGNVVPQGAEPLAMAYAGHQFGGFVPQLGDGRAILLGEVIDVNGRRRDIQLKGSGPTPFSRRGDGRAALGPVLREYIVSEAMFALGIPATRAL 149          
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y1451_AGRRK (UPF0061 protein Arad_1451 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=Arad_1451 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.485e-26
Identity = 64/126 (50.79%), Postives = 81/126 (64.29%), Query Frame = 3
Query:  399 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776
            V  P+L+ ++  +A  L LD +  ER D    FSG   L G+ P A  Y GHQFG +  QLGDGRAI LGE+++    R ++QLKGAG TP+SR  DG A L   +RE++ SEAM  LGIPTTRAL
Sbjct:   38 VAAPRLIKFNSVLASELGLDAEVLER-DGAAIFSGNALLPGSQPLAMAYAGHQFGGFVPQLGDGRAILLGEVIDRNGRRRDIQLKGAGPTPFSRRGDGRAALGPVLREYIVSEAMFALGIPTTRAL 162          
The following BLAST results are available for this feature:
BLAST of CX671975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 259
Match NameE-valueIdentityDescription
Y997_CLOPH1.706e-2647.41UPF0061 protein Cphy_0997 OS=Clostridium phytoferm... [more]
Y585_METCA1.706e-2649.61UPF0061 protein MCA0585 OS=Methylococcus capsulatu... [more]
Y577_RHOSR1.706e-2650.00UPF0061 protein RHA1_ro00577 OS=Rhodococcus sp. (s... [more]
Y1334_CLOBA1.706e-2648.15UPF0061 protein CLH_1334 OS=Clostridium botulinum ... [more]
Y3358_BRASO2.229e-2645.93UPF0061 protein BRADO3358 OS=Bradyrhizobium sp. (s... [more]
Y4142_BRAJA2.911e-2646.67UPF0061 protein bll4142 OS=Bradyrhizobium japonicu... [more]
Y945_NITWN3.802e-2645.99UPF0061 protein Nwi_0945 OS=Nitrobacter winogradsk... [more]
Y330_SHEON3.802e-2648.18UPF0061 protein SO_0330 OS=Shewanella oneidensis G... [more]
Y945_AGRT56.485e-2647.62UPF0061 protein Atu0945 OS=Agrobacterium tumefacie... [more]
Y1451_AGRRK6.485e-2650.79UPF0061 protein Arad_1451 OS=Agrobacterium radioba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C03-E6-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671975 ID=CX671975; Name=CX671975; organism=Citrus sinensis; type=EST; length=781bp
CTAAACCACACCTCCTCTTCTCTTCACTCTCTTCTTCTTCTTCTTCTCTC
CGCCCTCGCCTCCCCAAATTCCCGTTCTACCCCGCCTACTTTACAAAGTC
TCCATCCTGTCCTTCCATCGCATGCCACGTCAGCACGACAGGCGGCGGCG
GTGCTGCGCAGATGGAGTCGAGTGCGTCTGTCGATTCGGTGACGCATGAT
TTGAAGAATCAGAGATTGGATACGGAAACGGAAACGGACGGCGGAGATGA
GAGCAAGATGACGAAGAAGCTGAAAGCTCTTGAGGATCTGAATTGGGACC
ACTCGTTTGTTCGAGAGTTGCCTGGTGATCCCAGGACTGATTCTATCCCT
CGTGAGGTATTGCATGCCTGTTATACTAAAGTTTCTCCGTCAGCTGAAGT
AGAAAATCCTCAGCTTGTTGCGTGGTCAGAATCAGTGGCCGATTCTCTTG
AGTTGGATCCTAAAGAATTTGAAAGACCAGATTTTCCCCTCTTTTTTTCT
GGGGCTACTCCTTTGGCGGGAGCGGTGCCATATGCTCAATGCTACGGTGG
ACATCAATTTGGCATGTGGGCTGGTCAGCTGGGTGATGGTCGGGCAATAA
CTCTTGGCGAGATCCTGAATTTGAAGTCGGAAAGGTGGGAATTGCAGCTT
AAAGGAGCTGGGAAGACTCCATATAGCCGCTTTGCTGATGGCCTTGCAGT
ACTGCGTAGTAGCATCAGGGAGTTCCTTTGCAGTGAAGCCATGCACTTTT
TAGGAATCCCAACAACTCGTGCACTTTGTCT
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