CX671975
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y558_PSEMY (UPF0061 protein Pmen_0558 OS=Pseudomonas mendocina (strain ymp) GN=Pmen_0558 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.882e-33 Identity = 81/170 (47.65%), Postives = 102/170 (60.00%), Query Frame = 3 Query: 270 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 +K L+ L +D+ F R GD A T+V P +E P+LV S L+LDP E +R +F F+G A P A Y GHQFG + +LGDGR + LGE++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SE +H LGIP++RALC Sbjct: 1 MKKLDQLTFDNRFARL--GD------------AFSTEVLPEP-IEQPRLVVASSDAMALLDLDPAEAQREEFAELFAGHKLWGEAEPRAMVYSGHQFGGYTPRLGDGRGLLLGEVVNAAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEHLHALGIPSSRALC 155
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y444_PSEFS (UPF0061 protein PFLU_0444 OS=Pseudomonas fluorescens (strain SBW25) GN=PFLU_0444 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.882e-33 Identity = 83/170 (48.82%), Postives = 100/170 (58.82%), Query Frame = 3 Query: 270 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 +KAL++L +D+ F R GD + + E L A P+LV S + L+LDP E P F F G A A P A Y GHQFG + QLGDGR + LGE+ N E W+L LKGAG TPYSR DG AVLRSSIREFL SEA+H LGIP++RALC Sbjct: 1 MKALDELTFDNRFARL--GDAFSTHVLPEPLDA-------------PRLVVASPAAMALLDLDPSVAETPVFAELFGGHKLWAEAEPRAMVYSGHQFGGYTPQLGDGRGLLLGEVYNEAGEHWDLHLKGAGMTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRALC 155
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y398_PSEPW (UPF0061 protein PputW619_0398 OS=Pseudomonas putida (strain W619) GN=PputW619_0398 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.882e-33 Identity = 83/170 (48.82%), Postives = 104/170 (61.18%), Query Frame = 3 Query: 270 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 +KAL+ L +D+ F R GD A T+V P + +P+LV S+S L+LDP + + P F FSG GA P A Y GHQFG + +LGDGR + L E++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGI T+RALC Sbjct: 1 MKALDQLTFDNRFARL--GD------------AFSTQVLPEP-IADPRLVIASKSAMALLDLDPAQADTPVFAELFSGHKLWEGADPRAMVYSGHQFGSYNPRLGDGRGLLLAEVVNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIATSRALC 155
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y5028_PSESM (UPF0061 protein PSPTO_5028 OS=Pseudomonas syringae pv. tomato GN=PSPTO_5028 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.458e-33 Identity = 84/170 (49.41%), Postives = 104/170 (61.18%), Query Frame = 3 Query: 270 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 +KAL++L +D+ F R GD A T V P ++ P+LV SES L+L P++ E P F FSG A A P A Y GHQFG + +LGDGR + LGE+ N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIP++RA C Sbjct: 1 MKALDELVFDNRFARL--GD------------AFSTHVLPEP-IDAPRLVVASESALALLDLAPEQSELPLFAEIFSGHKLWAEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVYNDAGEHWDLHLKGAGRTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRAAC 155
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y369_PSEE4 (UPF0061 protein PSEEN0369 OS=Pseudomonas entomophila (strain L48) GN=PSEEN0369 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.193e-33 Identity = 82/170 (48.24%), Postives = 105/170 (61.76%), Query Frame = 3 Query: 270 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 +K+L+ L +D+ F R GD A T+V P + +P+LV SE+ L+LDP + + P F FSG A P A Y GHQFG + +LGDGR + LGE++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIP++RALC Sbjct: 1 MKSLDQLVFDNRFARL--GD------------AFSTQVLPDP-IADPRLVVASEAAMALLDLDPAQADLPVFAELFSGHKLWEEADPRAMVYSGHQFGSYNPRLGDGRGLLLGEVVNDAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRALC 155
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2935_VARPS (UPF0061 protein Vapar_2935 OS=Variovorax paradoxus (strain S110) GN=Vapar_2935 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.153e-33 Identity = 80/139 (57.55%), Postives = 96/139 (69.06%), Query Frame = 3 Query: 366 ACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLF-FSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 A T++ P+ + P V SE+ A L L P ++ + + L +G P+AG +P+A Y GHQFG+WAGQLGDGRAI LGE E+QLKGAG+TPYSR ADG AVLRSSIREFLCSEAMH LGIPTTRALC Sbjct: 27 AFLTELRPTPLPDPPYWVGHSEAAARLLGL-PADWRQSEGTLAALTGNLPVAGTLPFATVYSGHQFGVWAGQLGDGRAIMLGET----EGGLEVQLKGAGRTPYSRGADGRAVLRSSIREFLCSEAMHGLGIPTTRALC 160
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2581_POLSJ (UPF0061 protein Bpro_2581 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=Bpro_2581 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.081e-32 Identity = 82/164 (50.00%), Postives = 100/164 (60.98%), Query Frame = 3 Query: 288 LNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 L W +SF R PG YT++ P+ + +P V S+++A L L+ E + +G AG+ P A Y GHQFG+WAGQLGDGRAI LG+ L + E+QLKGAG+TPYSR DG AVLRSSIREFL SEAMH LGIPTTRALC Sbjct: 19 LKWGNSFARLGPG--------------FYTELQPTP-LPSPYWVGRSQALARELGLEDHWLESAEALEVLTGNRSTAGSRPLASVYSGHQFGVWAGQLGDGRAILLGD-LQTPAGPQEIQLKGAGRTPYSRMGDGRAVLRSSIREFLASEAMHGLGIPTTRALC 166
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y485_PSE14 (UPF0061 protein PSPPH_0485 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_0485 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.718e-32 Identity = 80/170 (47.06%), Postives = 103/170 (60.59%), Query Frame = 3 Query: 270 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 +KAL++L +D+ F R GD + S+ E +E P+LV S+S L+L P++ + P F FSG + A P A Y GHQFG + +LGDGR + LGE N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+H LGIP++RA C Sbjct: 1 MKALDELIFDNRFARL--GDAFSTSVLSE-------------PIETPRLVVASQSALALLDLAPEQADLPLFAEIFSGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEAYNDAGEHWDLHLKGAGRTPYSRMGDGRAVLRSSIREFLASEALHALGIPSSRAGC 155
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y1192_THISH (UPF0061 protein Tgr7_1192 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=Tgr7_1192 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.718e-32 Identity = 80/166 (48.19%), Postives = 102/166 (61.45%), Query Frame = 3 Query: 279 LEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776 LEDL + +S+ R LP A + + P A P VA++E A + L P+E R +F F+G PL G P + Y GHQFG++ QLGDGRA+ LGE+ + RWELQLKG+G T +SR ADG AVLRS+IRE+L SEAMH LG+PTTRAL Sbjct: 4 LEDLKFINSYAR-LP-------------EAFHDRPMP-APFPQPYRVAFNEKAAALIGLHPEEASRAEFVNAFTGQIPLTGMEPVSMIYAGHQFGVYVPQLGDGRALVLGEVQTPEGARWELQLKGSGPTRFSRGADGRAVLRSTIREYLASEAMHALGVPTTRAL 154
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y494_PSEU2 (UPF0061 protein Psyr_0494 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_0494 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.550e-32 Identity = 80/170 (47.06%), Postives = 103/170 (60.59%), Query Frame = 3 Query: 270 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 +KAL++L +D+ F R GD + S+ E + A PQLV S+S L+L P++ + P F FSG + A P A Y GHQFG + +LGDGR + LGE+ N E W+L LKGAG+TPYSR DG AVLRSSIREFL SE +H LGIP++RA C Sbjct: 1 MKALDELIFDNRFARL--GDAFSTSVLPEPIDA-------------PQLVVASQSALALLDLAPEQADLPLFAEIFSGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVYNDAGEHWDLHLKGAGRTPYSRMGDGRAVLRSSIREFLASEVLHALGIPSSRAGC 155 The following BLAST results are available for this feature:
BLAST of CX671975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671975 ID=CX671975; Name=CX671975; organism=Citrus sinensis; type=EST; length=781bpback to top |