CX671975
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y5023_PSEAE (UPF0061 protein PA5023 OS=Pseudomonas aeruginosa GN=PA5023 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.544e-30 Identity = 78/170 (45.88%), Postives = 102/170 (60.00%), Query Frame = 3 Query: 270 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 +K+L+DL++D+ F R L G T+ +P P AE P+LV S + L+L + + F F G + A P A Y GHQFG + +LGDGR + LGE++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+ LGIP++RALC Sbjct: 1 MKSLDDLDFDNRFAR-LGGAFSTEVLP-----------DPIAE---PRLVVASPAALALLDLPAETSDEALFAELFGGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVINQAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALPALGIPSSRALC 155
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2105_ENTS8 (UPF0061 protein ESA_02105 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ESA_02105 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.544e-30 Identity = 75/149 (50.34%), Postives = 94/149 (63.09%), Query Frame = 3 Query: 330 PRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776 PR + R+ L YT+++P+ + N +L+ + +A +LEL F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE + + LKGAG TPYSR DG AVLRS++REFL SEAMH LGIPTTRAL Sbjct: 5 PRFIATWRDELPGFYTELTPTP-LNNSRLLCHNAPLAQALELPETLFDYQGPAGVWGGETLLPGMAPLAQVYSGHQFGVWAGQLGDGRGILLGEQQLSDGCKLDWHLKGAGLTPYSRMGDGRAVLRSTVREFLASEAMHGLGIPTTRAL 152
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y2395_RHOFD (UPF0061 protein Rfer_2395 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=Rfer_2395 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.323e-30 Identity = 75/136 (55.15%), Postives = 85/136 (62.50%), Query Frame = 3 Query: 372 YTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 YT ++P + P V S S A L L + P+ +G P+AG P A Y GHQFG WAGQLGDGRAI LGE L E+QLKG+G TPYSR DG AVLRSSIREFLCSEAM LGI T+RALC Sbjct: 29 YTPLAPWP-LPAPYWVGRSTSTARELGLSESWLDSPELLQVLTGNQPMAGTQPLASVYSGHQFGQWAGQLGDGRAILLGETGGL-----EVQLKGSGLTPYSRMGDGRAVLRSSIREFLCSEAMQGLGIATSRALC 158
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y6641_PSEAB (UPF0061 protein PA14_66410 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=PA14_66410 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.668e-30 Identity = 78/170 (45.88%), Postives = 101/170 (59.41%), Query Frame = 3 Query: 270 LKALEDLNWDHSFVRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 +K+L+DL++D+ F R D+ EVL P AE P+LV S + L+L + + F F G + A P A Y GHQFG + +LGDGR + LGE++N E W+L LKGAG+TPYSR DG AVLRSSIREFL SEA+ LGIP++RALC Sbjct: 1 MKSLDDLDFDNRFAR------LGDAFSTEVLP------DPIAE---PRLVVASPAALALLDLPAETSDEALFAELFGGHKLWSEAEPRAMVYSGHQFGSYNPRLGDGRGLLLGEVINQAGEHWDLHLKGAGQTPYSRMGDGRAVLRSSIREFLASEALPALGIPSSRALC 155
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y3959_PSEA6 (UPF0061 protein Patl_3959 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=Patl_3959 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.668e-30 Identity = 66/127 (51.97%), Postives = 83/127 (65.35%), Query Frame = 3 Query: 399 VENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRALC 779 V NPQLV + ++ D+L+L F + G T +AQ YGGHQFG W LGDGR + LGE + + W+L LKGAG TPYSRFADG AVLRS++RE+L SEA+H +GIPT+RALC Sbjct: 23 VANPQLVEVNHTLRDALQLPASWFTQSSIMSMLFGNTSSFTTHSFAQKYGGHQFGGWNPDLGDGRGVLLGEAKDKFGKSWDLHLKGAGPTPYSRFADGRAVLRSTLREYLASEALHHMGIPTSRALC 149
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: YDIU_SALCH (UPF0061 protein ydiU OS=Salmonella choleraesuis GN=ydiU PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.668e-30 Identity = 72/142 (50.70%), Postives = 91/142 (64.08%), Query Frame = 3 Query: 351 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776 R+ L A YT + P+ ++N +L+ +++ +A L + F+ + + G T L G P AQ GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL Sbjct: 10 RDELPATYTALLPTP-LKNARLIWYNDKLAQQLAIPASLFDVTNGAGVWGGETLLPGMSPVAQVCSGHQFGVWAGQLGDGRGILLGEQLLADGSTLDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRAL 150
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: YDIU_ECO55 (UPF0061 protein ydiU OS=Escherichia coli (strain 55989 / EAEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.668e-30 Identity = 74/142 (52.11%), Postives = 91/142 (64.08%), Query Frame = 3 Query: 351 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776 R+ L A YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL Sbjct: 10 RDELPATYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRAL 148
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: YDIU_ECO24 (UPF0061 protein ydiU OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.668e-30 Identity = 74/142 (52.11%), Postives = 91/142 (64.08%), Query Frame = 3 Query: 351 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776 R+ L A YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL Sbjct: 10 RDELPATYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNGAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRAL 148
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: Y1090_BORPE (UPF0061 protein BP1090 OS=Bordetella pertussis GN=BP1090 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.263e-29 Identity = 76/156 (48.72%), Postives = 92/156 (58.97%), Query Frame = 3 Query: 309 VRELPGDPRTDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776 +++LP D ++P E YT++ P P+L+ + A + LDP EF F FSG PL G A Y GHQFG+WAGQLG+ R G WELQLKGAG TPYSR DG AVLRSS+RE+L SEAMH LGIPTTR+L Sbjct: 6 LQDLPTDNSFAALPAEF----YTRLQPRPPAA-PRLLHANAEAAALIGLDPAEFSTQAFLDVFSGHAPLPGGDTLAAVYSGHQFGVWAGQLGEVRGPAGG---------WELQLKGAGMTPYSRMGDGRAVLRSSVREYLASEAMHGLGIPTTRSL 147
BLAST of CX671975 vs. ExPASy Swiss-Prot
Match: YDIU_ECOSE (UPF0061 protein ydiU OS=Escherichia coli (strain SE11) GN=ydiU PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.813e-29 Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = 3 Query: 351 REVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPLAGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGLAVLRSSIREFLCSEAMHFLGIPTTRAL 776 R+ L YT +SP+ + N +L+ + +A++L + F+ + G T L G P AQ Y GHQFG+WAGQLGDGR I LGE L + LKGAG TPYSR DG AVLRS+IRE L SEAMH+LGIPTTRAL Sbjct: 10 RDELPETYTALSPTP-LNNARLIWHNTELANTLSIPSSLFKNAAG--VWGGETLLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRAL 148 The following BLAST results are available for this feature:
BLAST of CX671975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 259
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671975 ID=CX671975; Name=CX671975; organism=Citrus sinensis; type=EST; length=781bpback to top |