CX671974

Overview
NameCX671974
Unique NameCX671974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1842_ERWCT (UPF0061 protein ECA1842 OS=Erwinia carotovora subsp. atroseptica GN=ECA1842 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.796e-25
Identity = 73/198 (36.87%), Postives = 100/198 (50.51%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL----PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P +GLWN+ +    L+   L+D       + RY    M  Y  +M  KLGL    P  N  ++  LL  M  +  DYT  FR L++ +   S        PL+   +D     + A+ SW  +Y Q L+     DEER+ LMN+ NPKY+LRNYL Q AI+ AE  D   + RL + + RP+DEQP     A LPP W
Sbjct:  290 PAVGLWNLHRLGQALSG--LMDTDTLERALARYEPALMQHYGTLMRAKLGLFTASPDDNDVLVG-LLRLMQKEGSDYTRTFRLLADSEKQASRS------PLRDEFID-----RAAFDSWFATYRQRLMQEDQDDEERRRLMNATNPKYILRNYLAQMAIERAESDDTSALARLHQALCRPFDEQPDSHDLAALPPDW 473          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y039_VIBVU (UPF0061 protein VV1_0039 OS=Vibrio vulnificus GN=VV1_0039 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.796e-25
Identity = 73/200 (36.50%), Postives = 107/200 (53.50%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYI-QELLSSGI--SDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P + LWN++  +  L+   LI+  +    + +Y       +  +M +KLGL    + + ++ + +   +A +  DYT FFR LS +       EDE  V    + L I ++    W+S  L  +  E  +SG   S ++R   M +VNPKY+LRNYL Q AID A+ GDF EV  L KL++ PYDEQ  ME YA LPP W
Sbjct:  292 PRVALWNLSALAHALSP--LIERDDLELALAQYEPTLGKVFSQLMRQKLGLLSQQEGDSELFNAMFALLAENHTDYTRFFRTLSQLDR-----EDEQTV----IDLFIDRDAAHGWLSRYLERVAMEQTASGEAKSAQQRCEQMRAVNPKYILRNYLAQQAIDKAQQGDFSEVHTLAKLLKNPYDEQAEMEAYAHLPPEW 480          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y6641_PSEAB (UPF0061 protein PA14_66410 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=PA14_66410 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.180e-25
Identity = 69/195 (35.38%), Postives = 107/195 (54.87%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN+A  +  L     +D+  A+  ++ +   +   Y  +M ++LGL    + ++ ++ +LL  M    VDY+ FFR L         PE   L  L+   +D     +EA+  W  +Y + +   G   E R+  M++VNP YVLRNYL Q AI+AAE GD+ EVR L +++ RP++EQPGME++ R PP W
Sbjct:  295 IAHWNLAALAQALTPLVEVDELRAS--LDLFLPLYQAHYLDLMRRRLGLGVAAENDQALVQELLQRMQGSAVDYSLFFRRLGE-----ETPE-RALASLRDDFVD-----REAFDRWAEAYRRRVEEEGGDQESRRRRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRLLHQVLSRPFEEQPGMERFTRRPPDW 476          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5413_PSEA8 (UPF0061 protein PLES_54131 OS=Pseudomonas aeruginosa (strain LESB58) GN=PLES_54131 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.180e-25
Identity = 69/195 (35.38%), Postives = 107/195 (54.87%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN+A  +  L     +D+  A+  ++ +   +   Y  +M ++LGL    + ++ ++ +LL  M    VDY+ FFR L         PE   L  L+   +D     +EA+  W  +Y + +   G   E R+  M++VNP YVLRNYL Q AI+AAE GD+ EVR L +++ RP++EQPGME++ R PP W
Sbjct:  295 IAHWNLAALAQALTPLVEVDELRAS--LDLFLPLYQAHYLDLMRRRLGLGVAAENDQALVQELLQRMQGSAVDYSLFFRRLGE-----ETPE-RALASLRDDFVD-----REAFDRWAEAYRRRVEEEGGDQESRRRRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRLLHQVLSRPFEEQPGMERFTRRPPDW 476          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1574_AZOSB (UPF0061 protein azo1574 OS=Azoarcus sp. (strain BH72) GN=azo1574 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.068e-24
Identity = 76/202 (37.62%), Postives = 102/202 (50.50%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTLAAAKLIDDKEANYV-MERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNV---KADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P I  WN+ Q +  L  A      EA    +  Y   +  E +A+   KLGL      +  ++  L   M   +VD T FFRAL+ V   K DP++  D      K +      E  E +  W+  Y       G+  ++R+A MN+ NP+YV+RNYL Q AIDAAE GD+G VR LL +M RPYDEQP    YA+  P WA
Sbjct:  313 PRIANWNLLQLANALFPA--FGSTEALQAGLNTYAEVYDRESRAMTAAKLGLAALADADLPMVDALHGWMKRAEVDMTLFFRALAEVDLLKPDPALFLDAFYDDAKRL------ETAEEFSGWLRLYADRCRQEGLDADQRRARMNAANPRYVMRNYLAQQAIDAAEQGDYGPVRSLLDVMRRPYDEQPERAAYAQRRPDWA 506          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5023_PSEAE (UPF0061 protein PA5023 OS=Pseudomonas aeruginosa GN=PA5023 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.395e-24
Identity = 69/195 (35.38%), Postives = 106/195 (54.36%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN+A  +  L     +D+  A+  ++ +   +   Y  +M ++LGL    + +  ++ +LL  M    VDY+ FFR L         PE   L  L+   +D     +EA+  W  +Y + +   G   E R+  M++VNP YVLRNYL Q AI+AAE GD+ EVR L +++ RP++EQPGME++ R PP W
Sbjct:  295 IAHWNLAALAQALTPLVEVDELRAS--LDLFLPLYQAHYLDLMRRRLGLGVAAENDHALVQELLQRMQGSAVDYSLFFRRLGE-----ETPE-RALASLRDDFVD-----REAFDRWAEAYRRRVEEEGGDQESRRRRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRLLHQVLSRPFEEQPGMERFTRRPPDW 476          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2463_PECCP (UPF0061 protein PC1_2463 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=PC1_2463 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.395e-24
Identity = 69/197 (35.03%), Postives = 101/197 (51.27%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P +GLWN+ + +  L+   L+D       + RY    M  Y  +M  KLGL      +  ++  LL  M  +  DYT+ FR L++ +   S        PL+   +D     + A+ SW  +Y Q L+     DEER+ LMN+ NPK++LRNYL Q AI+ AE  D   + RL + + +P+DEQP     A LPP W
Sbjct:  290 PAVGLWNLHRLAQALSG--LMDTDTLERALARYEPALMQHYGTLMRAKLGLFTASAEDNDVLVGLLRLMQQEGSDYTHTFRLLADSEKQAS------RAPLRDEFID-----RAAFDSWFATYRQRLMQEEQGDEERRRLMNTTNPKFILRNYLAQMAIERAENDDISVLARLHQALCQPFDEQPDKNDLAALPPEW 473          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1735_HERAR (UPF0061 protein HEAR1735 OS=Herminiimonas arsenicoxydans GN=HEAR1735 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.395e-24
Identity = 70/198 (35.35%), Postives = 100/198 (50.51%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P IG WN      TL    + D  E    +  Y   + +++  +M  KLGL        ++   L   +     D+T FFR L  ++   +   + L    + + LD     + A+  W L Y   L      D+ RK  M++VNPKYVLRNYL Q AI+ A+  DF EV +LL+++E+P+DEQP  EKYA LPP WA
Sbjct:  304 PQIGEWNCYALGQTLLPL-IGDVDETQNALRIYKPAYAEKFAELMRAKLGLQTQQPDDGKLFDALFAVLQGSHADFTLFFRRLGELRIGQAASREAL----RDLFLD-----RAAFDDWALQYELRLQLENSDDDARKLAMHAVNPKYVLRNYLAQIAIEKAQNKDFSEVAKLLQVLEKPFDEQPENEKYAALPPDWA 491          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1019_THIDA (UPF0061 protein Tbd_1019 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=Tbd_1019 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.395e-24
Identity = 74/200 (37.00%), Postives = 104/200 (52.00%), Query Frame = -3
Query:  253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQI--ISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAID-AAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843
            PD+  WN+ + +  L    L+  + A+  +  Y   F   Y A M  K GL   +  +  I+  L  +A ++VDYT F R L    +      D    PL+ + LD     + A+ +W + Y   L   G  D ER A M + NPKY+LRNYL ++AI  AA+L D+ EV RL +L+ RP+DEQP  E YA  PP WA R
Sbjct:  293 PDVAAWNLTKLAQALVP--LMSVETASQAISEYPQAFGRAYLARMAAKFGLAPGDDTVPLITDALQLLAGNRVDYTIFLRKLCAFDSQA----DAGNAPLRDLFLD-----RAAFDAWAVRYGAALRQHGQPDAERAATMRTRNPKYILRNYLAENAIRRAADLRDYSEVERLHRLLARPFDEQPAFEAYAAEPPDWAKR 481          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5760_PSEA7 (UPF0061 protein PSPA7_5760 OS=Pseudomonas aeruginosa (strain PA7) GN=PSPA7_5760 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.822e-24
Identity = 70/195 (35.90%), Postives = 108/195 (55.38%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN+A  +  L     +D+  A+  +E +   +   Y  +M ++LGL    + ++ ++ +LL  M    VDY+ FFR L         PE + L  L+   +D     +EA+  W  +Y + + + G     R+  M++VNP YVLRNYL Q AI+AAE GD+ EVR L +L+ RP++EQPGME++ R PP W
Sbjct:  295 IAHWNLAALAQALTPLVEVDELRAS--LELFLPLYQAHYLDLMRRRLGLGVAVENDQALVQELLQRMQGSAVDYSLFFRRLGE-----DAPE-QALARLRDDFVD-----REAFDRWGEAYRRRVEAEGGEQAARRQRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRLLHRLLARPFEEQPGMERFTRRPPDW 476          
The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
Y1842_ERWCT4.796e-2536.87UPF0061 protein ECA1842 OS=Erwinia carotovora subs... [more]
Y039_VIBVU4.796e-2536.50UPF0061 protein VV1_0039 OS=Vibrio vulnificus GN=V... [more]
Y6641_PSEAB8.180e-2535.38UPF0061 protein PA14_66410 OS=Pseudomonas aerugino... [more]
Y5413_PSEA88.180e-2535.38UPF0061 protein PLES_54131 OS=Pseudomonas aerugino... [more]
Y1574_AZOSB1.068e-2437.62UPF0061 protein azo1574 OS=Azoarcus sp. (strain BH... [more]
Y5023_PSEAE1.395e-2435.38UPF0061 protein PA5023 OS=Pseudomonas aeruginosa G... [more]
Y2463_PECCP1.395e-2435.03UPF0061 protein PC1_2463 OS=Pectobacterium carotov... [more]
Y1735_HERAR1.395e-2435.35UPF0061 protein HEAR1735 OS=Herminiimonas arsenico... [more]
Y1019_THIDA1.395e-2437.00UPF0061 protein Tbd_1019 OS=Thiobacillus denitrifi... [more]
Y5760_PSEA71.822e-2435.90UPF0061 protein PSPA7_5760 OS=Pseudomonas aerugino... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C03-E6-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTTTTTAAAATAAAAAATTGTAATAAATAAAATGATTTC
GAAATGCATAAACTGTTAAAATTCTGCAAAGAAATAATGCCATACAAATT
ATTTCTACTTTTTTCTGCAGCCACAAAAATAATAATAATAATAATGATTC
GACTATTATATACATGAAGTTACAATCCTCTTTCTGGTATAGGTATAACA
TAATGCAGAGAATGGCAGATTACGATGAACAGGAAAGCATGCAAACACCT
GGTCGATAAGCCCATGCCGGGGGCAGGCGAGCATACTTTTCCATTCCTGG
TTGCTCGTCATATGGGCGTTCCATAAGTTTAAGCAACCTCCGCACCTCAC
CAAAATCTCCGAGCTCAGCTGCATCGATAGCACTCTGGCACAAGTAGTTT
CTAAGAACATATTTTGGGTTCACAGAATTCATCAATGCCTTCCTTTCCTC
ATCTGAGATGCCACTAGACAACAGCTCTTGTATGTACGATAACACCCAGC
TGATCCATGCCTCCTTCCGCTCCTTTCCGATATCTAACAAAACAGCCTTC
AGTGGAACTAACAACTCATCCTCTGGAATGCTGGGATCAGCTTTGACATT
GGAAAGTGCACGAAAGAAATTTGTGTAATCAACTTTGTCAACAGCCATAT
TGTTTAGAAGTTTACTAATAATCTGTTTATTGTATTTTGGAAGACCAAGT
TTCTTTGTCATAATGGCTTGATATTCATCCATAAACTTTGTTCCATATCT
TTCCATGACATAATTTGCCTCTTTATCATCTATCAATTTAGCTGCTGCTA
GAGTTGTGGAAAACTGTGCAATGTTCCACAAGCCAATATCAGGCT
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