CX671974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1334_CLOBA (UPF0061 protein CLH_1334 OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=CLH_1334 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11 Identity = 58/199 (29.15%), Postives = 89/199 (44.72%), Query Frame = -3 Query: 271 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAI----MTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAA-ELGDFGEVRRLLKLMERPYDEQPGMEKYARLP 843 P IG+WN+A+F+ TL D + A + + +K+ D Y M KLG+ + +K++I LL M K DYTN F L+ L DI + + W + + L S S EE K LM NP + RN + A+ AA + D+ ++ LL +++ PYD E Y+ +P Sbjct: 297 PKIGVWNLARFAETLLPLLDEDLESAVEIAQNSISKYSDLYNKYWYTGMRAKLGIFNEKEEDKELIQSLLTMMKRFKADYTNTFSNLT-----------------LGNLSDIDMFASKEFKMWYEVWKERLKSQNQSSEESKMLMEKSNPTIIPRNNRVEEALVAAIKDSDYSVMQSLLDVLKNPYDYSSINEYYSIVP 478
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1226_CLOB1 (UPF0061 protein CLB_1226 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=CLB_1226 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11 Identity = 59/203 (29.06%), Postives = 95/203 (46.80%), Query Frame = -3 Query: 271 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQ----AIMTKKLGLPKYNKQI-----ISKLLNNMAVDKVDYTNFFRALS--NVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAA-ELGDFGEVRRLLKLMERPYDEQPGMEKYARLP 843 P+I WN+A+F+ TL I+ EA + E + F Y+ + M KLG+ +N+++ I LL+ M DYTN FRAL+ N+ ED +L K + W + + L + K LM S NP + RN+ + A++AA + GD+ + +LL + +PYD + Y++LP Sbjct: 297 PNIATWNLARFAETLLPLLHINPNEAIKIAENAVSDFTKLYKNNWLSGMRAKLGI--FNEELEDEYLIEDLLSIMHKYGADYTNTFRALTFDNI-------EDTVL------------GGKVEFDKWYKLWQERLTRQEEAKLSSKQLMKSSNPSVIPRNHRVEEALEAAVKEGDYSVMEKLLDALSKPYDHSKEQDYYSKLP 478
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1195_CLOBH (UPF0061 protein CBO1195/CLC_1238 OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=CBO1195 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.148e-11 Identity = 59/203 (29.06%), Postives = 95/203 (46.80%), Query Frame = -3 Query: 271 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQ----AIMTKKLGLPKYNKQI-----ISKLLNNMAVDKVDYTNFFRALS--NVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAA-ELGDFGEVRRLLKLMERPYDEQPGMEKYARLP 843 P+I WN+A+F+ TL I+ EA + E + F Y+ + M KLG+ +N+++ I LL+ M DYTN FRAL+ N+ ED +L K + W + + L + K LM S NP + RN+ + A++AA + GD+ + +LL + +PYD + Y++LP Sbjct: 297 PNIATWNLARFAETLLPLLHINPNEAIKIAENAVSDFTKLYKNNWLSGMRAKLGI--FNEELEDEYLIEDLLSIMHKYGADYTNTFRALTFDNI-------EDTVL------------GGKVEFDKWYKLWQERLTRQEEAKLSSKQLMKSSNPSVIPRNHRVEEALEAAVKEGDYSVMEKLLDALSKPYDHSKEQDYYSKLP 478
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y3044_RHOPA (UPF0061 protein RPA3044 OS=Rhodopseudomonas palustris GN=RPA3044 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.723e-11 Identity = 53/199 (26.63%), Postives = 89/199 (44.72%), Query Frame = -3 Query: 271 PDIGLWNIAQFSTTLAAAKLIDDKE----ANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAA-ELGDFGEVRRLLKLMERPYDEQPGMEKYARLP 843 P I LWN+ + + L DD + A + + +F Y A + KLGL ++Q+ + L +A + D+T FR LS+ DPS L ++A+ D A+ W + + + R+A M VNP Y+ RN+ ++ I AA + DF +L ++ P++E+ +YA P Sbjct: 291 PPIALWNLTRLAECLVRLLADDDDKGIEIAQTALGGFAEQFNAAYLAKLAAKLGLFTSQPDDQQLSQEFLTALAKGEADFTLAFRRLSDAAVDPSD-----LGEVRALFAD-----PAAFDEWAPRWRARIATEPQDATTRQAAMRRVNPAYIPRNHRIEAVIRAAVDRDDFAPFEEILTVLANPFEEKAEFARYAEPP 479
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y945_AGRT5 (UPF0061 protein Atu0945 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu0945 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.781e-11 Identity = 57/201 (28.36%), Postives = 89/201 (44.28%), Query Frame = -3 Query: 271 PDIGLWNIAQFSTTLAAAKLIDDKE------ANYVMERYGTKFMDEYQAIMTKKLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAA-ELGDFGEVRRLLKLMERPYDEQPGMEKYARLP 843 P I WNIA+ + L L+D + AN V+ + F + M +KLGL + +I LL+ M + D+T FR LS+ + P + + + + + R+ A GISD ER A M S+NP + RN+ + I+AA E GDF +L + P++E+P Y + P Sbjct: 288 PGIAQWNIARLAECLLP--LLDPEVEKAAELANAVLADFAAAFPQRWLTGMREKLGLTTEEEGDMDLIQSLLSLMQASEADFTLTFRRLSHAANGDAEPFRGMFIDIAGADAFLTRWRERAG------------REGISDSERSAAMLSINPAIIPRNHRIEELIEAAVEDGDFEPFHAMLTAIATPFEERPDNFVYMQPP 474
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y040_CLOPS (UPF0061 protein CPR_0040 OS=Clostridium perfringens (strain SM101 / Type A) GN=CPR_0040 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.781e-11 Identity = 56/198 (28.28%), Postives = 91/198 (45.96%), Query Frame = -3 Query: 271 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAI----MTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLP 843 P++ LWN+A+FS L + EA + ++ + F Y+ M KLGL + ++ +I LL+ M + D+TN F +L+ K EDE + + +W + L EE + LM + NP + RN+L + A+ AE GDF + LL+ ++ PY +EKY +LP Sbjct: 297 PNMALWNLARFSEALLPLLNPNLDEAVNIAKKSISSFSKLYKKYWFNKMRAKLGLFTKKENDELLIEGLLSTMQKYEADFTNTFVSLTLNKF-----EDEKVFS------------SNEFKTWYALWKDRLKEENRPKEEVRNLMMNNNPYIIPRNHLVEEALKNAEKGDFTFMDNLLEALKNPYSYSKDLEKYTKLP 477 The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bpback to top |