CX671974

Overview
NameCX671974
Unique NameCX671974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y863_MYXXD (UPF0061 protein MXAN_0863 OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_0863 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.380e-24
Identity = 75/201 (37.31%), Postives = 95/201 (47.26%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVK----ADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P IGLWN+A     L    LI + EA   +  Y   +   +   M  KLGL +    +++++S L   MA   VDYT FFRAL +      AD     D    P             E + +W   Y   L + G  D ER A M  VNPKYVLRN++ Q AI  AE GDF  V RLL ++  P+ E P  E YA  PP W
Sbjct:  293 PRIGLWNLACLGEALLT--LISEDEARAALATYQPAYNAHFMDRMRAKLGLRETRDEDRELVSDLFARMAEAHVDYTRFFRALGHFASADGADTRPVRDMFPAP-------------EGFDAWAGRYRARLAAEGSVDAERHARMTRVNPKYVLRNWVAQEAISRAEAGDFSLVDRLLGVLSDPFAEHPDAEPYAAAPPTW 478          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1089_VIBVY (UPF0061 protein VV1089 OS=Vibrio vulnificus (strain YJ016) GN=VV1089 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.380e-24
Identity = 68/200 (34.00%), Postives = 106/200 (53.00%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQ-ELLSSGI--SDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P + LWN++  +  L+   L++  +    + +Y       +  +M +KLGL    + + ++ + +   +A +  DYT FFR LS + ++ +    +L          I ++    W+S  L  +  E  +SG   S ++R   M +VNPKY+LRNYL Q AID A+ GDF EV  L KL++ PYDEQ  ME YA LPP W
Sbjct:  292 PRVALWNLSALAHALSP--LVERDDLELALAQYEPTLGKVFSQLMRQKLGLLSQQEGDSELFNAMFTLLAENHTDYTRFFRTLSQLDSEGAQTVIDLF---------IDRDAARGWLSRYLERVALEQTASGEAKSAQQRCEQMRAVNPKYILRNYLAQQAIDKAQQGDFSEVHTLAKLLKNPYDEQAEMEAYAHLPPEW 480          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2793_FLAJ1 (UPF0061 protein Fjoh_2793 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=Fjoh_2793 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.925e-24
Identity = 68/200 (34.00%), Postives = 106/200 (53.00%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTLAAAKLIDDKEA-NYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLD-IGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P +  WN+ Q +   A   LI++ E    ++E +   F+ +Y+ +   KLGL    + +  +I  L   + + + D T FFR LS+VK   S+ +    +      ++ +  E  +AW  W   Y+  L +  +SDE R   MN +NPKYVLRNY+ Q AIDAA+  D+  V  L  L+++PYDEQP  +K+    P WA
Sbjct:  312 PQVAHWNLYQLAN--AIYPLINETEGLEKILESFMDDFILDYKEMFLNKLGLFTSTETDNDLIDNLEAVLQLTETDMTIFFRNLSSVKKTDSVEKAIEKIQFAFYKIEEVSGEILDAWKKWFSVYLDRLNAEVLSDEVRLQKMNLINPKYVLRNYMAQLAIDAADKEDYSLVNELYTLLQKPYDEQPEYQKWFAKRPDWA 509          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y558_PSEMY (UPF0061 protein Pmen_0558 OS=Pseudomonas mendocina (strain ymp) GN=Pmen_0558 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.045e-24
Identity = 68/196 (34.69%), Postives = 105/196 (53.57%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKV-DYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN+A  +  L    +I+ ++    +E +   +   Y  +M K+LGL      ++ ++ +LL  M   K  DY+ FFR L         P D L V ++   +D+       + +W   Y+      G   +ER+A M++VNP Y+LRNYL Q  I+AAE GD+G VR L  ++ RP+DEQPGM++YA+ PP W
Sbjct:  295 IAHWNLAALAQALTP--MIEVEKLRETLELFLPLYQAHYLDLMRKRLGLTSAEDDDEALVQRLLQLMQQGKATDYSLFFRQLGE-----QAPADALQV-VRNDFVDLA-----GFDAWGRDYLARCEREGQQQDERRARMHAVNPLYILRNYLAQQVIEAAEAGDYGPVRELHAVLSRPFDEQPGMQRYAQRPPEW 477          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y485_PSE14 (UPF0061 protein PSPPH_0485 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_0485 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.181e-23
Identity = 74/195 (37.95%), Postives = 110/195 (56.41%), Query Frame = -3
Query:  262 IAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQA----IMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGI-SDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 822
            IAQ++ +  A  L        + E  G  F+  YQA    +M ++LGL    + ++Q++S+LL  M    VDYT FFR L +       P  E L  L+   +DI     + +  W  +Y+  +   G  +++ER+  M++VNP Y+LRNYL Q+AI AAE GD+ EVRRL +++  P+ EQPGME YA+ PP W
Sbjct:  295 IAQWNLSALAQALTPFISVEALRETIGL-FLPLYQAHYLDLMRRRLGLTIAQEQDEQLVSQLLKLMQNSGVDYTLFFRRLGDQ------PAAEALRTLRDDFVDI-----KGFDGWAEAYLARIAGEGKGTEQERQTRMHAVNPLYILRNYLAQNAIAAAEKGDYAEVRRLHQVLCTPFTEQPGMEGYAQRPPDW 477          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1788_METFK (UPF0061 protein Mfla_1788 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=Mfla_1788 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.015e-23
Identity = 68/201 (33.83%), Postives = 104/201 (51.74%), Query Frame = -3
Query:  259 PDIGLWNI---AQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            PDI  WN+   AQ   TL   + I D+     +  Y   + +E+ A++  K G   +  +   +++++   M   ++D T FFR L+ V A      D  ++   A    + +  K  +  W+  Y Q  L+ G    ER+  MN VNP+YVLRNYL Q AID A+ GD   +  L+ ++ +PYDEQPG E++A L P WA
Sbjct:  312 PDIARWNLERLAQALYTLKPEREIYDEG----LMLYDQAYNNEWGAVLAAKFGFSAWRDEYEPLLNEVFGLMTQAEIDMTEFFRKLALVDA---AQPDLGILQSAAYSPALWETFKPRFSDWLGQYAQATLADGRDPAERREAMNRVNPRYVLRNYLAQQAIDLADTGDTSMIEALMDVLRKPYDEQPGKERFAALRPDWA 505          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y4127_AERHH (UPF0061 protein AHA_4127 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=AHA_4127 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.632e-23
Identity = 70/198 (35.35%), Postives = 95/198 (47.98%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDEL-LVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P +G WN+ + +  LA    +D       + +Y  + M  Y  +M  KLGL  + +    +  +L   +A   VDY  F R L  V  + + P   L L+P  A           AW  W+ +Y   L   G  D  RK LM++VNPKYVLRN L Q  I+AAE GD     RL   ++ PYDEQP  E+ A   PAW
Sbjct:  281 PAVGYWNLQKLAQALAGH--VDGDALAEALAQYEHQLMLHYSELMRAKLGLAVWEEDDPVLFRELFQLLAAHGVDYHLFLRRLGEVTREGAWPASLLALLPEPA-----------AWQGWLEAYRARLAREGSEDGVRKGLMDAVNPKYVLRNALAQRVIEAAEQGDMAPFERLFTALQHPYDEQPEYEELATPQPAW 465          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y494_PSEU2 (UPF0061 protein Psyr_0494 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=Psyr_0494 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23
Identity = 73/195 (37.44%), Postives = 111/195 (56.92%), Query Frame = -3
Query:  262 IAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQA----IMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQEL-LSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 822
            IAQ++ +  A  L      + + E  G  F+  YQA    +M ++LGL    + ++Q++S+LL  M    VDYT FFR L +       P  E L  L+   +DI     + +  W  +Y   + L +  +++ER+  M++VNP Y+LRNYL Q+AI AAE GD+ EVRRL +++  P+ EQPGM+ YA+ PP W
Sbjct:  295 IAQWNLSALAQALTPFISVDALREAIGL-FLPLYQAHYLDLMRRRLGLTVAHEQDEQLVSQLLKLMQNSGVDYTLFFRRLGDQ------PAAEALRTLRDDFVDI-----KGFDGWAQAYQARIALENNGTEQERQTRMHAVNPLYILRNYLAQNAIAAAEKGDYAEVRRLHQVLCTPFTEQPGMQGYAQRPPDW 477          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y444_PSEFS (UPF0061 protein PFLU_0444 OS=Pseudomonas fluorescens (strain SBW25) GN=PFLU_0444 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23
Identity = 70/197 (35.53%), Postives = 110/197 (55.84%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDD-KEANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGI-SDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            IG WN++  +  L     +D  KEA   +  Y   +   Y  +M ++LGL      +++++ +LL  M    VDYT FFR L +  A  ++        L+   +D+       + +W   Y   +   G  S+E+R+A M++VNP Y+LRNYL Q+AI AAE GD+ EVRRL +++ +P++EQ GME+YA+ PP W
Sbjct:  295 IGQWNLSALAQALTPFIGVDALKEA---LGLYLPLYQANYLDLMRRRLGLTTAEDDDQKLVERLLKLMQSSGVDYTLFFRRLGDEPAALAVTR------LRDDFVDLA-----GFDAWAEQYKARVERDGDNSEEQRRARMHAVNPLYILRNYLAQNAIAAAESGDYSEVRRLHEVLSKPFEEQAGMEQYAQRPPDW 477          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2210_ALISL (UPF0061 protein VSAL_I2210 OS=Aliivibrio salmonicida (strain LFI1238) GN=VSAL_I2210 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23
Identity = 66/197 (33.50%), Postives = 99/197 (50.25%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P IGLWN++  +  L+   LID  + +  +E+Y  +    +  +M +KLGL      + ++   +   ++ + VDYT F R LSNV               +  ++D+  +R  A + WV  YI        +   R   M  VNPKY+LRNYL Q AID A+ GD+ E+  L  L+  P+DE    E YA LPP+W
Sbjct:  293 PRIGLWNLSALAHALSP--LIDKADLDQALEQYEVQLHGYFSQLMRQKLGLITKQDGDSRLFESMFELLSQNSVDYTRFLRELSNVDTHN-----------EQAIIDLFIDRDAAKL-WVSLYITRCEKEHETVASRCKKMREVNPKYILRNYLAQQAIDKAQEGDYSELEALSLLLRSPFDEHIEFEHYANLPPSW 475          
The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
Y863_MYXXD2.380e-2437.31UPF0061 protein MXAN_0863 OS=Myxococcus xanthus (s... [more]
Y1089_VIBVY2.380e-2434.00UPF0061 protein VV1089 OS=Vibrio vulnificus (strai... [more]
Y2793_FLAJ16.925e-2434.00UPF0061 protein Fjoh_2793 OS=Flavobacterium johnso... [more]
Y558_PSEMY9.045e-2434.69UPF0061 protein Pmen_0558 OS=Pseudomonas mendocina... [more]
Y485_PSE141.181e-2337.95UPF0061 protein PSPPH_0485 OS=Pseudomonas syringae... [more]
Y1788_METFK2.015e-2333.83UPF0061 protein Mfla_1788 OS=Methylobacillus flage... [more]
Y4127_AERHH2.632e-2335.35UPF0061 protein AHA_4127 OS=Aeromonas hydrophila s... [more]
Y494_PSEU27.657e-2337.44UPF0061 protein Psyr_0494 OS=Pseudomonas syringae ... [more]
Y444_PSEFS7.657e-2335.53UPF0061 protein PFLU_0444 OS=Pseudomonas fluoresce... [more]
Y2210_ALISL7.657e-2333.50UPF0061 protein VSAL_I2210 OS=Aliivibrio salmonici... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C03-E6-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTTTTTAAAATAAAAAATTGTAATAAATAAAATGATTTC
GAAATGCATAAACTGTTAAAATTCTGCAAAGAAATAATGCCATACAAATT
ATTTCTACTTTTTTCTGCAGCCACAAAAATAATAATAATAATAATGATTC
GACTATTATATACATGAAGTTACAATCCTCTTTCTGGTATAGGTATAACA
TAATGCAGAGAATGGCAGATTACGATGAACAGGAAAGCATGCAAACACCT
GGTCGATAAGCCCATGCCGGGGGCAGGCGAGCATACTTTTCCATTCCTGG
TTGCTCGTCATATGGGCGTTCCATAAGTTTAAGCAACCTCCGCACCTCAC
CAAAATCTCCGAGCTCAGCTGCATCGATAGCACTCTGGCACAAGTAGTTT
CTAAGAACATATTTTGGGTTCACAGAATTCATCAATGCCTTCCTTTCCTC
ATCTGAGATGCCACTAGACAACAGCTCTTGTATGTACGATAACACCCAGC
TGATCCATGCCTCCTTCCGCTCCTTTCCGATATCTAACAAAACAGCCTTC
AGTGGAACTAACAACTCATCCTCTGGAATGCTGGGATCAGCTTTGACATT
GGAAAGTGCACGAAAGAAATTTGTGTAATCAACTTTGTCAACAGCCATAT
TGTTTAGAAGTTTACTAATAATCTGTTTATTGTATTTTGGAAGACCAAGT
TTCTTTGTCATAATGGCTTGATATTCATCCATAAACTTTGTTCCATATCT
TTCCATGACATAATTTGCCTCTTTATCATCTATCAATTTAGCTGCTGCTA
GAGTTGTGGAAAACTGTGCAATGTTCCACAAGCCAATATCAGGCT
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