CX671974

Overview
NameCX671974
Unique NameCX671974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2395_RHOFD (UPF0061 protein Rfer_2395 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=Rfer_2395 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21
Identity = 73/207 (35.27%), Postives = 108/207 (52.17%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTLAAAKLIDDKE-ANYVMERYGTKFMDEYQAIMTKKLGL-------PKYNKQIISKLLNNMAVDKVDYTNFFRALSN--VKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQEL--LSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P+I  WN+  F    A   LI ++E A   +E Y T F   ++ +M  KLGL          ++ ++  +L  +A ++VDYT F+R LS+  V  D     D          L + +   +AW+   L Y + L  +  G++ +    LM   NPK+VLRNYL + AI AA+L DF +V  LL L+E P++E PG +KYA  PP WA
Sbjct:  300 PNIAYWNL--FCLGQALLPLIGEQELAIAALESYKTVFPAAFERLMFAKLGLLDASDSTATVDRALLQDILQLLAREQVDYTIFWRRLSHCGVATDAQTVRD----------LFVDRSAADAWL---LRYSERLEHIPQGLAAD----LMLKTNPKFVLRNYLGEQAIQAAKLKDFSQVETLLMLLESPFEEHPGFDKYADFPPDWA 487          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2107_BORBR (UPF0061 protein BB2107 OS=Bordetella bronchiseptica GN=BB2107 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21
Identity = 68/199 (34.17%), Postives = 98/199 (49.25%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTLAAAKLIDDKEA-NYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P +GLWN+ + +++L    L  D EA   V++ Y   F   +   M  KLGLP++   ++ ++  LL  M     D+T  FR L         P ++L +             + A  +W         S G + + R A M+ VNP YVLRN+L + AI AA  GD GE+  LLKL+  PY +QPG + YA L P WA
Sbjct:  302 PSVGLWNLYRLASSLHT--LAPDPEALRAVLDGYEAVFTQAFHGRMAGKLGLPQFLPEDETLLDDLLQLMHQQGADFTLAFRRLGEAVRGQRQPFEDLFID------------RAAAGAWYDRLAARHASDGRAAQARAAAMDEVNPLYVLRNHLAEQAIRAAARGDAGEIDILLKLLRNPYKQQPGYDAYAGLAPDWA 486          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1919_BORPA (UPF0061 protein BPP1919 OS=Bordetella parapertussis GN=BPP1919 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21
Identity = 68/199 (34.17%), Postives = 98/199 (49.25%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTLAAAKLIDDKEA-NYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P +GLWN+ + +++L    L  D EA   V++ Y   F   +   M  KLGLP++   ++ ++  LL  M     D+T  FR L         P ++L +             + A  +W         S G + + R A M+ VNP YVLRN+L + AI AA  GD GE+  LLKL+  PY +QPG + YA L P WA
Sbjct:  302 PSVGLWNLYRLASSLHT--LAPDPEALRAVLDGYEAVFTQAFHGRMAGKLGLPQFLPEDETLLDDLLQLMHQQGADFTLAFRRLGEAVRGQRQPFEDLFID------------RAAAGAWYDRLAARHASDGRAAQARAAAMDEVNPLYVLRNHLAEQAIRAAARGDAGEIDILLKLLRNPYKQQPGYDAYAGLAPDWA 486          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1864_RALME (UPF0061 protein Rmet_1864 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=Rmet_1864 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21
Identity = 63/168 (37.50%), Postives = 92/168 (54.76%), Query Frame = -3
Query:  259 ERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 753
            +RY   F   Y+A    KLGL    +Q   +++ L   +  ++VDYT+F+R LS V +  +  +        A + D+  +R  AW +W   Y   L S    D  R   M + NPKYVLRN++ ++AI AA   DF EV RL+ ++ +P+DEQP  E YA+LPP WA
Sbjct:  381 DRYAEAFFRHYRA----KLGLRSEQEQDETLMTNLFRVLHENRVDYTSFWRNLSRVSSLDNSHD--------AAVRDLFLDRA-AWDAWAAEYRARLQSEQSDDAARTTAMLATNPKYVLRNHMAETAIRAARDKDFSEVDRLMAVLSKPFDEQPEAESYAKLPPDWA 535          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1826_BURA4 (UPF0061 protein BamMC406_1826 OS=Burkholderia ambifaria (strain MC40-6) GN=BamMC406_1826 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21
Identity = 64/182 (35.16%), Postives = 97/182 (53.30%), Query Frame = -3
Query:  259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795
            A + +DD +A  V+ ++  +F    +  M  KLGL    + + ++ +KLL  M     D+T  FR L+ +    +  +     P++ + +D     ++A+ +W   Y   L      D  R A MN VNPKYVLRN+L + AI  A+  DF EV RL +++ RP+DEQP  E YA LPP WA
Sbjct:  343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELERENDAELANKLLETMHASHADFTLTFRRLAQLSKHDASRD----APVRDLFID-----RDAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAEVAIRRAKEKDFSEVERLAQVLRRPFDEQPEHEAYAALPPDWA 513          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5209_BURS3 (UPF0061 protein Bcep18194_A5209 OS=Burkholderia sp. (strain 383) GN=Bcep18194_A5209 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.886e-21
Identity = 63/182 (34.62%), Postives = 97/182 (53.30%), Query Frame = -3
Query:  259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795
            A + ++D +A  V+ ++  +F    +  M  KLGL    + + ++ +KLL  M     D+T  FR L+ +    +  +     P++ + +D     ++A+ +W   Y   L      D  R A MN VNPKYVLRN+L + AI  A+  DF EV RL +++ RP+DEQP  E YA LPP WA
Sbjct:  343 AERAVEDAQA--VLAKFPERFGPALERAMRAKLGLELERESDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----RDAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y6171_BURCA (UPF0061 protein Bcen_6171 OS=Burkholderia cenocepacia (strain AU 1054) GN=Bcen_6171 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = -3
Query:  259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795
            A + +DD +A  V+ ++  +F    +  M  KLGL    + + ++ +KLL  M     D+T  FR L+ +    +  +     P++ + +D     +EA+ +W   Y   L      D  R   MN  NPKYVLRN+L + AI  A+  DF EV RL +++ RP+DEQP  E YA LPP WA
Sbjct:  343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELEREGDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAVAMNRANPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y3959_PSEA6 (UPF0061 protein Patl_3959 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=Patl_3959 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 62/197 (31.47%), Postives = 106/197 (53.81%), Query Frame = -3
Query:  262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843
            P +GLWN+   +   A    +  ++    + +Y    M E+  +M +KLGL +  +   +++++ L+ +  DK DY   FR L  V       E++ LV    +  D  K       +W+  Y   L++ G+  +ER+A M ++NP+YVLRNY  Q AIDAA+ GDF   R+LL +++ P++ +P   ++A+ PP W
Sbjct:  287 PSVGLWNLNALAH--AFTPYLSVEQIKGALSQYEASLMAEFSQLMRQKLGLYENTQNTAELVNRWLDLIYQDKRDYHISFRLLCEVDEHG---ENQPLVD-HFIQRDTAK-------TWLEHYQNALITQGVKRQERQANMRNINPEYVLRNYQAQLAIDAAQNGDFSRFRKLLHVLQHPFESKPEYAEFAKPPPNW 470          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1944_BURCJ (UPF0061 protein BceJ2315_19440 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=BceJ2315_19440 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = -3
Query:  259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795
            A + +DD +A  V+ ++  +F    +  M  KLGL    + + ++ +KLL  M     D+T  FR L+ +    +  +     P++ + +D     +EA+ +W   Y   L      D  R   MN  NPKYVLRN+L + AI  A+  DF EV RL +++ RP+DEQP  E YA LPP WA
Sbjct:  343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLALEREGDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAVAMNRANPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1931_BURCC (UPF0061 protein Bcenmc03_1931 OS=Burkholderia cenocepacia (strain MC0-3) GN=Bcenmc03_1931 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = -3
Query:  259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795
            A + +DD +A  V+ ++  +F    +  M  KLGL    + + ++ +KLL  M     D+T  FR L+ +    +  +     P++ + +D     +EA+ +W   Y   L      D  R   MN  NPKYVLRN+L + AI  A+  DF EV RL +++ RP+DEQP  E YA LPP WA
Sbjct:  343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLALEREGDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAVAMNRANPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513          
The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
Y2395_RHOFD1.444e-2135.27UPF0061 protein Rfer_2395 OS=Rhodoferax ferrireduc... [more]
Y2107_BORBR1.444e-2134.17UPF0061 protein BB2107 OS=Bordetella bronchiseptic... [more]
Y1919_BORPA1.444e-2134.17UPF0061 protein BPP1919 OS=Bordetella parapertussi... [more]
Y1864_RALME1.444e-2137.50UPF0061 protein Rmet_1864 OS=Ralstonia metallidura... [more]
Y1826_BURA41.444e-2135.16UPF0061 protein BamMC406_1826 OS=Burkholderia ambi... [more]
Y5209_BURS31.886e-2134.62UPF0061 protein Bcep18194_A5209 OS=Burkholderia sp... [more]
Y6171_BURCA3.217e-2134.62UPF0061 protein Bcen_6171 OS=Burkholderia cenocepa... [more]
Y3959_PSEA63.217e-2131.47UPF0061 protein Patl_3959 OS=Pseudoalteromonas atl... [more]
Y1944_BURCJ3.217e-2134.62UPF0061 protein BceJ2315_19440 OS=Burkholderia cep... [more]
Y1931_BURCC3.217e-2134.62UPF0061 protein Bcenmc03_1931 OS=Burkholderia ceno... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C03-E6-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTTTTTAAAATAAAAAATTGTAATAAATAAAATGATTTC
GAAATGCATAAACTGTTAAAATTCTGCAAAGAAATAATGCCATACAAATT
ATTTCTACTTTTTTCTGCAGCCACAAAAATAATAATAATAATAATGATTC
GACTATTATATACATGAAGTTACAATCCTCTTTCTGGTATAGGTATAACA
TAATGCAGAGAATGGCAGATTACGATGAACAGGAAAGCATGCAAACACCT
GGTCGATAAGCCCATGCCGGGGGCAGGCGAGCATACTTTTCCATTCCTGG
TTGCTCGTCATATGGGCGTTCCATAAGTTTAAGCAACCTCCGCACCTCAC
CAAAATCTCCGAGCTCAGCTGCATCGATAGCACTCTGGCACAAGTAGTTT
CTAAGAACATATTTTGGGTTCACAGAATTCATCAATGCCTTCCTTTCCTC
ATCTGAGATGCCACTAGACAACAGCTCTTGTATGTACGATAACACCCAGC
TGATCCATGCCTCCTTCCGCTCCTTTCCGATATCTAACAAAACAGCCTTC
AGTGGAACTAACAACTCATCCTCTGGAATGCTGGGATCAGCTTTGACATT
GGAAAGTGCACGAAAGAAATTTGTGTAATCAACTTTGTCAACAGCCATAT
TGTTTAGAAGTTTACTAATAATCTGTTTATTGTATTTTGGAAGACCAAGT
TTCTTTGTCATAATGGCTTGATATTCATCCATAAACTTTGTTCCATATCT
TTCCATGACATAATTTGCCTCTTTATCATCTATCAATTTAGCTGCTGCTA
GAGTTGTGGAAAACTGTGCAATGTTCCACAAGCCAATATCAGGCT
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