CX671974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2395_RHOFD (UPF0061 protein Rfer_2395 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=Rfer_2395 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21 Identity = 73/207 (35.27%), Postives = 108/207 (52.17%), Query Frame = -3 Query: 259 PDIGLWNIAQFSTTLAAAKLIDDKE-ANYVMERYGTKFMDEYQAIMTKKLGL-------PKYNKQIISKLLNNMAVDKVDYTNFFRALSN--VKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQEL--LSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843 P+I WN+ F A LI ++E A +E Y T F ++ +M KLGL ++ ++ +L +A ++VDYT F+R LS+ V D D L + + +AW+ L Y + L + G++ + LM NPK+VLRNYL + AI AA+L DF +V LL L+E P++E PG +KYA PP WA Sbjct: 300 PNIAYWNL--FCLGQALLPLIGEQELAIAALESYKTVFPAAFERLMFAKLGLLDASDSTATVDRALLQDILQLLAREQVDYTIFWRRLSHCGVATDAQTVRD----------LFVDRSAADAWL---LRYSERLEHIPQGLAAD----LMLKTNPKFVLRNYLGEQAIQAAKLKDFSQVETLLMLLESPFEEHPGFDKYADFPPDWA 487
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2107_BORBR (UPF0061 protein BB2107 OS=Bordetella bronchiseptica GN=BB2107 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21 Identity = 68/199 (34.17%), Postives = 98/199 (49.25%), Query Frame = -3 Query: 259 PDIGLWNIAQFSTTLAAAKLIDDKEA-NYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843 P +GLWN+ + +++L L D EA V++ Y F + M KLGLP++ ++ ++ LL M D+T FR L P ++L + + A +W S G + + R A M+ VNP YVLRN+L + AI AA GD GE+ LLKL+ PY +QPG + YA L P WA Sbjct: 302 PSVGLWNLYRLASSLHT--LAPDPEALRAVLDGYEAVFTQAFHGRMAGKLGLPQFLPEDETLLDDLLQLMHQQGADFTLAFRRLGEAVRGQRQPFEDLFID------------RAAAGAWYDRLAARHASDGRAAQARAAAMDEVNPLYVLRNHLAEQAIRAAARGDAGEIDILLKLLRNPYKQQPGYDAYAGLAPDWA 486
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1919_BORPA (UPF0061 protein BPP1919 OS=Bordetella parapertussis GN=BPP1919 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21 Identity = 68/199 (34.17%), Postives = 98/199 (49.25%), Query Frame = -3 Query: 259 PDIGLWNIAQFSTTLAAAKLIDDKEA-NYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843 P +GLWN+ + +++L L D EA V++ Y F + M KLGLP++ ++ ++ LL M D+T FR L P ++L + + A +W S G + + R A M+ VNP YVLRN+L + AI AA GD GE+ LLKL+ PY +QPG + YA L P WA Sbjct: 302 PSVGLWNLYRLASSLHT--LAPDPEALRAVLDGYEAVFTQAFHGRMAGKLGLPQFLPEDETLLDDLLQLMHQQGADFTLAFRRLGEAVRGQRQPFEDLFID------------RAAAGAWYDRLAARHASDGRAAQARAAAMDEVNPLYVLRNHLAEQAIRAAARGDAGEIDILLKLLRNPYKQQPGYDAYAGLAPDWA 486
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1864_RALME (UPF0061 protein Rmet_1864 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=Rmet_1864 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21 Identity = 63/168 (37.50%), Postives = 92/168 (54.76%), Query Frame = -3 Query: 259 ERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 753 +RY F Y+A KLGL +Q +++ L + ++VDYT+F+R LS V + + + A + D+ +R AW +W Y L S D R M + NPKYVLRN++ ++AI AA DF EV RL+ ++ +P+DEQP E YA+LPP WA Sbjct: 381 DRYAEAFFRHYRA----KLGLRSEQEQDETLMTNLFRVLHENRVDYTSFWRNLSRVSSLDNSHD--------AAVRDLFLDRA-AWDAWAAEYRARLQSEQSDDAARTTAMLATNPKYVLRNHMAETAIRAARDKDFSEVDRLMAVLSKPFDEQPEAESYAKLPPDWA 535
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1826_BURA4 (UPF0061 protein BamMC406_1826 OS=Burkholderia ambifaria (strain MC40-6) GN=BamMC406_1826 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21 Identity = 64/182 (35.16%), Postives = 97/182 (53.30%), Query Frame = -3 Query: 259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795 A + +DD +A V+ ++ +F + M KLGL + + ++ +KLL M D+T FR L+ + + + P++ + +D ++A+ +W Y L D R A MN VNPKYVLRN+L + AI A+ DF EV RL +++ RP+DEQP E YA LPP WA Sbjct: 343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELERENDAELANKLLETMHASHADFTLTFRRLAQLSKHDASRD----APVRDLFID-----RDAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAEVAIRRAKEKDFSEVERLAQVLRRPFDEQPEHEAYAALPPDWA 513
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5209_BURS3 (UPF0061 protein Bcep18194_A5209 OS=Burkholderia sp. (strain 383) GN=Bcep18194_A5209 PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.886e-21 Identity = 63/182 (34.62%), Postives = 97/182 (53.30%), Query Frame = -3 Query: 259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795 A + ++D +A V+ ++ +F + M KLGL + + ++ +KLL M D+T FR L+ + + + P++ + +D ++A+ +W Y L D R A MN VNPKYVLRN+L + AI A+ DF EV RL +++ RP+DEQP E YA LPP WA Sbjct: 343 AERAVEDAQA--VLAKFPERFGPALERAMRAKLGLELERESDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----RDAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y6171_BURCA (UPF0061 protein Bcen_6171 OS=Burkholderia cenocepacia (strain AU 1054) GN=Bcen_6171 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21 Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = -3 Query: 259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795 A + +DD +A V+ ++ +F + M KLGL + + ++ +KLL M D+T FR L+ + + + P++ + +D +EA+ +W Y L D R MN NPKYVLRN+L + AI A+ DF EV RL +++ RP+DEQP E YA LPP WA Sbjct: 343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELEREGDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAVAMNRANPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y3959_PSEA6 (UPF0061 protein Patl_3959 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=Patl_3959 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21 Identity = 62/197 (31.47%), Postives = 106/197 (53.81%), Query Frame = -3 Query: 262 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNK---QIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 843 P +GLWN+ + A + ++ + +Y M E+ +M +KLGL + + +++++ L+ + DK DY FR L V E++ LV + D K +W+ Y L++ G+ +ER+A M ++NP+YVLRNY Q AIDAA+ GDF R+LL +++ P++ +P ++A+ PP W Sbjct: 287 PSVGLWNLNALAH--AFTPYLSVEQIKGALSQYEASLMAEFSQLMRQKLGLYENTQNTAELVNRWLDLIYQDKRDYHISFRLLCEVDEHG---ENQPLVD-HFIQRDTAK-------TWLEHYQNALITQGVKRQERQANMRNINPEYVLRNYQAQLAIDAAQNGDFSRFRKLLHVLQHPFESKPEYAEFAKPPPNW 470
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1944_BURCJ (UPF0061 protein BceJ2315_19440 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=BceJ2315_19440 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21 Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = -3 Query: 259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795 A + +DD +A V+ ++ +F + M KLGL + + ++ +KLL M D+T FR L+ + + + P++ + +D +EA+ +W Y L D R MN NPKYVLRN+L + AI A+ DF EV RL +++ RP+DEQP E YA LPP WA Sbjct: 343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLALEREGDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAVAMNRANPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1931_BURCC (UPF0061 protein Bcenmc03_1931 OS=Burkholderia cenocepacia (strain MC0-3) GN=Bcenmc03_1931 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21 Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = -3 Query: 259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795 A + +DD +A V+ ++ +F + M KLGL + + ++ +KLL M D+T FR L+ + + + P++ + +D +EA+ +W Y L D R MN NPKYVLRN+L + AI A+ DF EV RL +++ RP+DEQP E YA LPP WA Sbjct: 343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLALEREGDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAVAMNRANPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513 The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bpback to top |