CX671974

Overview
NameCX671974
Unique NameCX671974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1908_BURCH (UPF0061 protein Bcen2424_1908 OS=Burkholderia cenocepacia (strain HI2424) GN=Bcen2424_1908 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = -3
Query:  259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795
            A + +DD +A  V+ ++  +F    +  M  KLGL    + + ++ +KLL  M     D+T  FR L+ +    +  +     P++ + +D     +EA+ +W   Y   L      D  R   MN  NPKYVLRN+L + AI  A+  DF EV RL +++ RP+DEQP  E YA LPP WA
Sbjct:  343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELEREGDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAVAMNRANPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1840_BURVG (UPF0061 protein Bcep1808_1840 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=Bcep1808_1840 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 63/182 (34.62%), Postives = 97/182 (53.30%), Query Frame = -3
Query:  259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795
            A + +DD +A  V+ ++  +F    +  M  KLGL    +++ ++ ++LL  M     D+T  FR L+ +    +  +     P++ + +D     + A+ +W   Y   L      D  R A MN VNPKYVLRN+L + AI  A+  DF EV RL +++ RP+DEQP  E YA LPP WA
Sbjct:  343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELEREHDAELANQLLETMHASHADFTLTFRRLAQLSKHDASRD----APVRDLFID-----RAAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAEVAIRRAKDKDFSEVERLAQILRRPFDEQPEHEPYAALPPDWA 513          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y3800_AZOSE (UPF0061 protein AZOSEA38000 OS=Azoarcus sp. (strain EbN1) GN=AZOSEA38000 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.201e-21
Identity = 67/205 (32.68%), Postives = 104/205 (50.73%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTL----AAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKAD-PSIPEDELLVPLKAVLLDIGKER--KEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P I  WN+ Q +  L     AA+ + +      ++ Y   F +E + ++  KLG   +  +   ++  L   +   +VD T FFR L+++  + PSI       PL+       K    +    SW+ +Y +         ++R+  MN+VNP++VLRNYL Q AIDAAE G++  V  LL +M  PYDEQPG E++A   P WA
Sbjct:  317 PHIAHWNLLQLANALYPVFGAAEPLHEG-----LDLYARVFDEENRRMLAAKLGFEAFGDEDATLVETLHALLTRAEVDMTIFFRGLASLDLEAPSID------PLRDAFYSAEKAAVAEPEMNSWLAAYTKRTKQERTPGDQRRVRMNAVNPRFVLRNYLAQEAIDAAEQGEYALVSELLDVMRHPYDEQPGRERFAARRPDWA 510          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5028_PSESM (UPF0061 protein PSPTO_5028 OS=Pseudomonas syringae pv. tomato GN=PSPTO_5028 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.487e-21
Identity = 72/195 (36.92%), Postives = 104/195 (53.33%), Query Frame = -3
Query:  262 IAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQA----IMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEE-RKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 822
            IAQ++ +     L        + E  G  F+  YQA    +M ++LGL     Q   ++S+LL  M    VDYT FFR L +       P  + L  L+   +DI     + +  W  +Y   + +     E+ RK  M++VNP Y+LRNYL Q+AI+AAE GD+ EVRRL +++  P+ EQPGME YA+ PP W
Sbjct:  295 IAQWNLSALGQALTPFVSVEALRETIGL-FLPLYQAHYLDLMRRRLGLTVAQDQDDKLVSQLLQLMQNSGVDYTLFFRRLGDQ------PAAQALRALRDDFVDI-----KVFDDWAQAYQARIAAEENGTEQARKERMHAVNPLYILRNYLAQNAIEAAEKGDYEEVRRLHQVLCTPFTEQPGMEGYAQRPPDW 477          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2277_BORA1 (UPF0061 protein BAV2277 OS=Bordetella avium (strain 197N) GN=BAV2277 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.487e-21
Identity = 73/201 (36.32%), Postives = 101/201 (50.25%), Query Frame = -3
Query:  259 PDIGLWNIAQFSTTLAAAKLIDDKEA-NYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLD--IGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843
            P + LWN+ +   +L    L+ D +A   V+  Y T F   + A M  KLGL  +   ++ ++  LL  M   + D+T  FRAL+      + P            LD  I +E  +AW S + +        G +   R   M+ VNP YVLRN+L + AI AA+ GD  E+ RLL L+ RPYD QPG E YA LPP WA
Sbjct:  297 PSVALWNLYRLGGSLHG--LVPDADALRGVLAEYETLFTQAFHARMGAKLGLSVWQSDDEALLDDLLRLMHDSRADFTLTFRALAQAVRGQTQP-----------FLDYFIDREAAQAWWSRLAA---RHACDGRAAAVRAEGMDRVNPLYVLRNHLAEQAIRAAQQGDASEIDRLLGLLRRPYDLQPGAEAYAALPPDWA 481          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5118_PSEPG (UPF0061 protein PputGB1_5118 OS=Pseudomonas putida (strain GB-1) GN=PputGB1_5118 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.166e-21
Identity = 63/195 (32.31%), Postives = 100/195 (51.28%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN++  +  L    +I+ +     +  +   +   Y  +M ++LGL    +    ++ +LL  M    VDY+ FFR L         P  + L  ++   +D+      A+ +W   Y+        + E R+  M++VNP YVLRNYL Q AI+AAE GD+ EVRRL +++  P++EQPGM+ YA  PP W
Sbjct:  295 IAHWNLSALAQALTT--VIEVEPLKETLGLFLPLYQAHYLDLMRRRLGLTTAEEDDMALVERLLQCMQRGGVDYSLFFRKLGEQ------PAADALKVVRDDFIDLA-----AFDAWGADYLARCDREPGNAEGRRERMHAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLSHPFEEQPGMQAYAERPPEW 476          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y4941_PSEP1 (UPF0061 protein Pput_4941 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=Pput_4941 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.166e-21
Identity = 64/195 (32.82%), Postives = 98/195 (50.26%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN++  +  L    +I+ +     +  +   +   Y  +M ++LGL         ++ +LL  M    VDY+ FFR L         P  E L   +   +D+       + +W   Y+        + E R+  M++VNP YVLRNYL Q AI+AAE GD+ EVRRL +++ RP++EQPGM+ YA  PP W
Sbjct:  295 IAHWNLSALAQALTT--VIEVEPLKEALGLFLPLYQAHYLDLMRRRLGLTTAEDDDMALVERLLQCMQRGGVDYSLFFRKLGEQ------PVAEALKVARDDFIDLA-----GFDAWGADYLARCRREPGNAEGRRERMHAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLTRPFEEQPGMQAYAERPPEW 476          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1877_BURM1 (UPF0061 protein Bmul_1366/BMULJ_01877 OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=Bmul_1366 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 7.166e-21
Identity = 64/182 (35.16%), Postives = 95/182 (52.20%), Query Frame = -3
Query:  259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795
            A + +DD +A  V+  +  +F    +  M  KLGL      +  + ++LL  M   + D+T  FR L+ +    +  +     P++ + +D     +EA+ +W   Y   L      D  R A MN VNPKYVLRN+L + AI  A+  DF EV RL +++ RP+DEQP  E YA LPP WA
Sbjct:  343 AERAVDDAQA--VLATFPERFGPALERAMRAKLGLALERDGDAALANQLLETMHASRADFTLTFRRLAQLSKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAELAIRRAKEKDFSEVERLAQVLRRPFDEQPEHESYAALPPDWA 513          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5068_PSEPK (UPF0061 protein PP_5068 OS=Pseudomonas putida (strain KT2440) GN=PP_5068 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20
Identity = 64/195 (32.82%), Postives = 98/195 (50.26%), Query Frame = -3
Query:  262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837
            I  WN++  +  L    +I+ +     +  +   +   Y  +M ++LGL         ++ +LL  M    VDY+ FFR L         P  E L   +   +D+       + +W   Y+        + E R+  M++VNP YVLRNYL Q AI+AAE GD+ EVRRL +++ RP++EQPGM+ YA  PP W
Sbjct:  295 IAHWNLSALAQALTT--VIEVEPLKEALGLFLPLYQAHYLDLMRRRLGLTTAEDDDMVLVERLLQCMQRGGVDYSLFFRKLGEQ------PVAEALKVARDDFIDLA-----GFDAWGADYLARCGREPGNAEGRRERMHAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLARPFEEQPGMQAYAERPPEW 476          
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1736_ENT38 (UPF0061 protein Ent638_1736 OS=Enterobacter sp. (strain 638) GN=Ent638_1736 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20
Identity = 65/200 (32.50%), Postives = 100/200 (50.00%), Query Frame = -3
Query:  253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843
            P +GLWN+ + + +L+    I  +  N  ++RY    M EY  +M +KLGL    K +  I++ L   M+ +  DYT  FR L   +   +        PL+   +D     ++ + SW  +Y   L      D+ R A MN+VNP  VLRN+L Q AID AE GD+ E+ RL   +  P++++   + Y   PP W  R
Sbjct:  289 PAVGLWNLQRLAQSLSP--FIAVEALNDALDRYQDVLMQEYGKLMRRKLGLMTQEKGDNDILNALFALMSREGSDYTRTFRMLGQTEKHSAAS------PLRDEFID-----RQGFDSWFATYRARLQREETPDDARNAHMNAVNPAMVLRNWLAQRAIDQAEQGDYAELHRLHDALRTPFNDRD--DDYVSRPPDWGKR 473          
The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 196
Match NameE-valueIdentityDescription
Y1908_BURCH3.217e-2134.62UPF0061 protein Bcen2424_1908 OS=Burkholderia ceno... [more]
Y1840_BURVG3.217e-2134.62UPF0061 protein Bcep1808_1840 OS=Burkholderia viet... [more]
Y3800_AZOSE4.201e-2132.68UPF0061 protein AZOSEA38000 OS=Azoarcus sp. (strai... [more]
Y5028_PSESM5.487e-2136.92UPF0061 protein PSPTO_5028 OS=Pseudomonas syringae... [more]
Y2277_BORA15.487e-2136.32UPF0061 protein BAV2277 OS=Bordetella avium (strai... [more]
Y5118_PSEPG7.166e-2132.31UPF0061 protein PputGB1_5118 OS=Pseudomonas putida... [more]
Y4941_PSEP17.166e-2132.82UPF0061 protein Pput_4941 OS=Pseudomonas putida (s... [more]
Y1877_BURM17.166e-2135.16UPF0061 protein Bmul_1366/BMULJ_01877 OS=Burkholde... [more]
Y5068_PSEPK1.222e-2032.82UPF0061 protein PP_5068 OS=Pseudomonas putida (str... [more]
Y1736_ENT381.222e-2032.50UPF0061 protein Ent638_1736 OS=Enterobacter sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14C03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14C03-E6-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bp
TTTTTTTTTTTTTTTTTAAAATAAAAAATTGTAATAAATAAAATGATTTC
GAAATGCATAAACTGTTAAAATTCTGCAAAGAAATAATGCCATACAAATT
ATTTCTACTTTTTTCTGCAGCCACAAAAATAATAATAATAATAATGATTC
GACTATTATATACATGAAGTTACAATCCTCTTTCTGGTATAGGTATAACA
TAATGCAGAGAATGGCAGATTACGATGAACAGGAAAGCATGCAAACACCT
GGTCGATAAGCCCATGCCGGGGGCAGGCGAGCATACTTTTCCATTCCTGG
TTGCTCGTCATATGGGCGTTCCATAAGTTTAAGCAACCTCCGCACCTCAC
CAAAATCTCCGAGCTCAGCTGCATCGATAGCACTCTGGCACAAGTAGTTT
CTAAGAACATATTTTGGGTTCACAGAATTCATCAATGCCTTCCTTTCCTC
ATCTGAGATGCCACTAGACAACAGCTCTTGTATGTACGATAACACCCAGC
TGATCCATGCCTCCTTCCGCTCCTTTCCGATATCTAACAAAACAGCCTTC
AGTGGAACTAACAACTCATCCTCTGGAATGCTGGGATCAGCTTTGACATT
GGAAAGTGCACGAAAGAAATTTGTGTAATCAACTTTGTCAACAGCCATAT
TGTTTAGAAGTTTACTAATAATCTGTTTATTGTATTTTGGAAGACCAAGT
TTCTTTGTCATAATGGCTTGATATTCATCCATAAACTTTGTTCCATATCT
TTCCATGACATAATTTGCCTCTTTATCATCTATCAATTTAGCTGCTGCTA
GAGTTGTGGAAAACTGTGCAATGTTCCACAAGCCAATATCAGGCT
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