CX671974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1908_BURCH (UPF0061 protein Bcen2424_1908 OS=Burkholderia cenocepacia (strain HI2424) GN=Bcen2424_1908 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21 Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = -3 Query: 259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795 A + +DD +A V+ ++ +F + M KLGL + + ++ +KLL M D+T FR L+ + + + P++ + +D +EA+ +W Y L D R MN NPKYVLRN+L + AI A+ DF EV RL +++ RP+DEQP E YA LPP WA Sbjct: 343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELEREGDAELANKLLETMHASHADFTLTFRRLAQISKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAVAMNRANPKYVLRNHLAEVAIRRAKEKDFSEVERLAQILRRPFDEQPEHEAYAALPPDWA 513
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1840_BURVG (UPF0061 protein Bcep1808_1840 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=Bcep1808_1840 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21 Identity = 63/182 (34.62%), Postives = 97/182 (53.30%), Query Frame = -3 Query: 259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795 A + +DD +A V+ ++ +F + M KLGL +++ ++ ++LL M D+T FR L+ + + + P++ + +D + A+ +W Y L D R A MN VNPKYVLRN+L + AI A+ DF EV RL +++ RP+DEQP E YA LPP WA Sbjct: 343 AERAVDDAQA--VLAKFPERFGPALERAMRAKLGLELEREHDAELANQLLETMHASHADFTLTFRRLAQLSKHDASRD----APVRDLFID-----RAAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAEVAIRRAKDKDFSEVERLAQILRRPFDEQPEHEPYAALPPDWA 513
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y3800_AZOSE (UPF0061 protein AZOSEA38000 OS=Azoarcus sp. (strain EbN1) GN=AZOSEA38000 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.201e-21 Identity = 67/205 (32.68%), Postives = 104/205 (50.73%), Query Frame = -3 Query: 259 PDIGLWNIAQFSTTL----AAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKAD-PSIPEDELLVPLKAVLLDIGKER--KEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843 P I WN+ Q + L AA+ + + ++ Y F +E + ++ KLG + + ++ L + +VD T FFR L+++ + PSI PL+ K + SW+ +Y + ++R+ MN+VNP++VLRNYL Q AIDAAE G++ V LL +M PYDEQPG E++A P WA Sbjct: 317 PHIAHWNLLQLANALYPVFGAAEPLHEG-----LDLYARVFDEENRRMLAAKLGFEAFGDEDATLVETLHALLTRAEVDMTIFFRGLASLDLEAPSID------PLRDAFYSAEKAAVAEPEMNSWLAAYTKRTKQERTPGDQRRVRMNAVNPRFVLRNYLAQEAIDAAEQGEYALVSELLDVMRHPYDEQPGRERFAARRPDWA 510
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5028_PSESM (UPF0061 protein PSPTO_5028 OS=Pseudomonas syringae pv. tomato GN=PSPTO_5028 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.487e-21 Identity = 72/195 (36.92%), Postives = 104/195 (53.33%), Query Frame = -3 Query: 262 IAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQA----IMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEE-RKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 822 IAQ++ + L + E G F+ YQA +M ++LGL Q ++S+LL M VDYT FFR L + P + L L+ +DI + + W +Y + + E+ RK M++VNP Y+LRNYL Q+AI+AAE GD+ EVRRL +++ P+ EQPGME YA+ PP W Sbjct: 295 IAQWNLSALGQALTPFVSVEALRETIGL-FLPLYQAHYLDLMRRRLGLTVAQDQDDKLVSQLLQLMQNSGVDYTLFFRRLGDQ------PAAQALRALRDDFVDI-----KVFDDWAQAYQARIAAEENGTEQARKERMHAVNPLYILRNYLAQNAIEAAEKGDYEEVRRLHQVLCTPFTEQPGMEGYAQRPPDW 477
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2277_BORA1 (UPF0061 protein BAV2277 OS=Bordetella avium (strain 197N) GN=BAV2277 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.487e-21 Identity = 73/201 (36.32%), Postives = 101/201 (50.25%), Query Frame = -3 Query: 259 PDIGLWNIAQFSTTLAAAKLIDDKEA-NYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLD--IGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843 P + LWN+ + +L L+ D +A V+ Y T F + A M KLGL + ++ ++ LL M + D+T FRAL+ + P LD I +E +AW S + + G + R M+ VNP YVLRN+L + AI AA+ GD E+ RLL L+ RPYD QPG E YA LPP WA Sbjct: 297 PSVALWNLYRLGGSLHG--LVPDADALRGVLAEYETLFTQAFHARMGAKLGLSVWQSDDEALLDDLLRLMHDSRADFTLTFRALAQAVRGQTQP-----------FLDYFIDREAAQAWWSRLAA---RHACDGRAAAVRAEGMDRVNPLYVLRNHLAEQAIRAAQQGDASEIDRLLGLLRRPYDLQPGAEAYAALPPDWA 481
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5118_PSEPG (UPF0061 protein PputGB1_5118 OS=Pseudomonas putida (strain GB-1) GN=PputGB1_5118 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.166e-21 Identity = 63/195 (32.31%), Postives = 100/195 (51.28%), Query Frame = -3 Query: 262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837 I WN++ + L +I+ + + + + Y +M ++LGL + ++ +LL M VDY+ FFR L P + L ++ +D+ A+ +W Y+ + E R+ M++VNP YVLRNYL Q AI+AAE GD+ EVRRL +++ P++EQPGM+ YA PP W Sbjct: 295 IAHWNLSALAQALTT--VIEVEPLKETLGLFLPLYQAHYLDLMRRRLGLTTAEEDDMALVERLLQCMQRGGVDYSLFFRKLGEQ------PAADALKVVRDDFIDLA-----AFDAWGADYLARCDREPGNAEGRRERMHAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLSHPFEEQPGMQAYAERPPEW 476
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y4941_PSEP1 (UPF0061 protein Pput_4941 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=Pput_4941 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.166e-21 Identity = 64/195 (32.82%), Postives = 98/195 (50.26%), Query Frame = -3 Query: 262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837 I WN++ + L +I+ + + + + Y +M ++LGL ++ +LL M VDY+ FFR L P E L + +D+ + +W Y+ + E R+ M++VNP YVLRNYL Q AI+AAE GD+ EVRRL +++ RP++EQPGM+ YA PP W Sbjct: 295 IAHWNLSALAQALTT--VIEVEPLKEALGLFLPLYQAHYLDLMRRRLGLTTAEDDDMALVERLLQCMQRGGVDYSLFFRKLGEQ------PVAEALKVARDDFIDLA-----GFDAWGADYLARCRREPGNAEGRRERMHAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLTRPFEEQPGMQAYAERPPEW 476
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1877_BURM1 (UPF0061 protein Bmul_1366/BMULJ_01877 OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=Bmul_1366 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.166e-21 Identity = 64/182 (35.16%), Postives = 95/182 (52.20%), Query Frame = -3 Query: 259 AAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 795 A + +DD +A V+ + +F + M KLGL + + ++LL M + D+T FR L+ + + + P++ + +D +EA+ +W Y L D R A MN VNPKYVLRN+L + AI A+ DF EV RL +++ RP+DEQP E YA LPP WA Sbjct: 343 AERAVDDAQA--VLATFPERFGPALERAMRAKLGLALERDGDAALANQLLETMHASRADFTLTFRRLAQLSKHDASRD----APVRDLFID-----REAFDAWANLYRARLSEETRDDAARAAAMNRVNPKYVLRNHLAELAIRRAKEKDFSEVERLAQVLRRPFDEQPEHESYAALPPDWA 513
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y5068_PSEPK (UPF0061 protein PP_5068 OS=Pseudomonas putida (strain KT2440) GN=PP_5068 PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 64/195 (32.82%), Postives = 98/195 (50.26%), Query Frame = -3 Query: 262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837 I WN++ + L +I+ + + + + Y +M ++LGL ++ +LL M VDY+ FFR L P E L + +D+ + +W Y+ + E R+ M++VNP YVLRNYL Q AI+AAE GD+ EVRRL +++ RP++EQPGM+ YA PP W Sbjct: 295 IAHWNLSALAQALTT--VIEVEPLKEALGLFLPLYQAHYLDLMRRRLGLTTAEDDDMVLVERLLQCMQRGGVDYSLFFRKLGEQ------PVAEALKVARDDFIDLA-----GFDAWGADYLARCGREPGNAEGRRERMHAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLARPFEEQPGMQAYAERPPEW 476
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1736_ENT38 (UPF0061 protein Ent638_1736 OS=Enterobacter sp. (strain 638) GN=Ent638_1736 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 65/200 (32.50%), Postives = 100/200 (50.00%), Query Frame = -3 Query: 253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843 P +GLWN+ + + +L+ I + N ++RY M EY +M +KLGL K + I++ L M+ + DYT FR L + + PL+ +D ++ + SW +Y L D+ R A MN+VNP VLRN+L Q AID AE GD+ E+ RL + P++++ + Y PP W R Sbjct: 289 PAVGLWNLQRLAQSLSP--FIAVEALNDALDRYQDVLMQEYGKLMRRKLGLMTQEKGDNDILNALFALMSREGSDYTRTFRMLGQTEKHSAAS------PLRDEFID-----RQGFDSWFATYRARLQREETPDDARNAHMNAVNPAMVLRNWLAQRAIDQAEQGDYAELHRLHDALRTPFNDRD--DDYVSRPPDWGKR 473 The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bpback to top |