CX671974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y1090_BORPE (UPF0061 protein BP1090 OS=Bordetella pertussis GN=BP1090 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 67/199 (33.67%), Postives = 96/199 (48.24%), Query Frame = -3 Query: 259 PDIGLWNIAQFSTTLAAAKLIDDKEA-NYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843 P +GLWN+ + +++L L D EA V++ Y F + M KLGLP++ ++ ++ LL M D+T FR L P ++ + + A +W S G + + R A M+ VNP YVLRN+L + AI AA GD GE+ LLKL+ PY QPG + YA L P WA Sbjct: 294 PSVGLWNLYRLASSLHT--LAPDPEALRAVLDGYEAVFTQAFHGRMAGKLGLPQFLPEDETLLDDLLQLMHQQGADFTLAFRRLGEAVRGQRQPFEDSFID------------RAAAGAWYDRLAARHASDGRAAQARAAAMDEVNPLYVLRNHLAEQAIRAAARGDAGEIDILLKLLRNPYKHQPGYDAYAGLAPDWA 478
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: YDIU_SALTY (UPF0061 protein ydiU OS=Salmonella typhimurium GN=ydiU PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 65/200 (32.50%), Postives = 101/200 (50.50%), Query Frame = -3 Query: 253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843 P + LWN+ + + TL ID N ++RY + Y M +KLG K + ++++L + MA + DYT FR LS+ + + PL+ +D + A+ +W Y L + + D R+ M VNP VLRN+L Q AIDAAE GD E+ RL +++ +P+ ++ + YAR PP W R Sbjct: 289 PSVALWNLQRLAQTLTPFIEID--ALNRALDRYQDALLTHYGQRMRQKLGFFTEQKDDNVLLNELFSLMAREGSDYTRTFRMLSHTE------QQSASSPLRDTFID-----RAAFDAWFDRYRARLRTEAVDDALRQQQMQRVNPAIVLRNWLAQRAIDAAEQGDMAELHRLHEVLRQPFTDRD--DDYARRPPEWGKR 473
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: YDIU_ECO7I (UPF0061 protein ydiU OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 64/200 (32.00%), Postives = 100/200 (50.00%), Query Frame = -3 Query: 253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843 P + LWN+ + + TL+ +D N ++ Y + Y M +KLG K+ ++++L + MA ++ DYT FR LS + + PL+ +D + A+ W Y + L +SD ER+ LM SVNP VLRN+L Q AI+AAE GD E+ RL + + P+ ++ + Y PP W R Sbjct: 287 PAVALWNLQRLAQTLSPFVAVD--ALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTE------QHSAASPLRDEFID-----RAAFDDWFARYRRRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRD--DDYVSRPPDWGKR 471
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y398_PSEPW (UPF0061 protein PputW619_0398 OS=Pseudomonas putida (strain W619) GN=PputW619_0398 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 62/195 (31.79%), Postives = 98/195 (50.26%), Query Frame = -3 Query: 262 IGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 837 I WN++ + L +I+ + + + + Y +M ++LGL ++ +LL M VDY FFR L + P E L ++ +D+ + +W Y+ + + R+ M++VNP YVLRNYL Q AI+AAE GD+ EVRRL +++ P++EQ GM+ YA PPAW Sbjct: 295 IAHWNLSALAQALTT--VIEVEPLKEALGLFLPLYQAHYLDLMRRRLGLTTAEDDDMALVERLLQRMQSGGVDYNLFFRRLGDQ------PVAEALKGVRDDFIDLA-----GFDAWGADYLARCEREAGNGDGRRERMHAVNPLYVLRNYLAQKAIEAAEAGDYSEVRRLHQVLSTPFEEQAGMQAYAERPPAW 476
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: Y2581_POLSJ (UPF0061 protein Bpro_2581 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=Bpro_2581 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 68/199 (34.17%), Postives = 103/199 (51.76%), Query Frame = -3 Query: 259 PDIGLWNIAQFSTTLAAAKLIDDKE-ANYVMERYGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 843 P+I WN+ F A LI+D+E A +E Y T F +A M KLGL + ++++I +A +KVDYT F+R L ++ + D +E++ +W L Y + + +G+ R LM NPK+VLRN+L + AI AA+L DF V LL L++ P+DE PG + ++ PP WA Sbjct: 304 PNIAYWNL--FCLGQALLPLIEDQEQALAALESYKTVFPQALEARMRDKLGLVETQAGDRELIESTFKLLASNKVDYTIFWRRLCGFTPQSGHES------VRDLFFD-----RESFNAWALQYSERV--AGVDQGVRANLMLKSNPKFVLRNHLGEEAIRAAKLKDFSGVNTLLGLLQAPFDEHPGHDSFSDFPPDWA 487
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: YDIU_SHIFL (UPF0061 protein ydiU OS=Shigella flexneri GN=ydiU PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20 Identity = 64/200 (32.00%), Postives = 99/200 (49.50%), Query Frame = -3 Query: 253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843 P + LWN+ + + TL+ +D N ++ Y + Y M +KLG K+ ++++L + MA ++ DYT FR LS + + PL+ +D + A+ W Y L +SD ER+ LM SVNP VLRN+L Q AI+AAE GD E+ RL + + P+ ++ + Y PP W R Sbjct: 287 PAVALWNLQRLAQTLSPFVAVD--ALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTE------QHSAASPLREEFID-----RAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEALRNPFSDRD--DDYVSRPPDWGKR 471
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: YDIU_SALAR (UPF0061 protein ydiU OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=ydiU PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20 Identity = 65/200 (32.50%), Postives = 100/200 (50.00%), Query Frame = -3 Query: 253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843 P + LWN+ + + TL ID N ++RY + Y M +KLG K + ++++L + MA + DYT FR LS+ + + PL+ +D + A+ W Y L + + D R+ M SVNP VLRN+L Q AIDAAE GD E+ RL +++ +P+ ++ + YA PP W R Sbjct: 289 PSVALWNLQRLAQTLTPFIEID--ALNRALDRYQDALLTRYGQRMRQKLGFFTEQKDDNVLLNELFSLMAREGSDYTRTFRMLSHTE------QQSASSPLRDTFID-----RAAFDGWFDRYRARLRTEAVDDALRQQQMQSVNPAVVLRNWLAQRAIDAAEQGDMAELHRLHEILRQPFIDRD--DDYASRPPEWGKR 473
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: YDIU_ECOSM (UPF0061 protein ydiU OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ydiU PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20 Identity = 64/200 (32.00%), Postives = 100/200 (50.00%), Query Frame = -3 Query: 253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843 P + LWN+ + + TL+ +D N ++ Y + Y M +KLG K+ ++++L + MA ++ DYT FR LS + + PL+ +D + A+ W Y + L +SD ER+ LM SVNP VLRN+L Q AI+AAE GD E+ RL + + P+ ++ + Y PP W R Sbjct: 287 PAVALWNLQRLAQTLSPFVAVD--ALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTE------QHSAASPLRDEFID-----RAAFDDWFARYRRRLQQDEVSDIERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRD--DDYVSRPPDWGKR 471
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: YDIU_ECOSE (UPF0061 protein ydiU OS=Escherichia coli (strain SE11) GN=ydiU PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20 Identity = 64/200 (32.00%), Postives = 99/200 (49.50%), Query Frame = -3 Query: 253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843 P + LWN+ + + TL+ +D N ++ Y + Y M +KLG K+ ++++L + MA ++ DYT FR LS + + PL+ +D + A+ W Y L +SD ER+ LM SVNP VLRN+L Q AI+AAE GD E+ RL + + P+ ++ + Y PP W R Sbjct: 287 PAVALWNLQRLAQTLSPFVAVD--ALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTE------QHSAASPLRDEFID-----RAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDR--ADDYVSRPPDWGKR 471
BLAST of CX671974 vs. ExPASy Swiss-Prot
Match: YDIU_ECOLI (UPF0061 protein ydiU OS=Escherichia coli (strain K12) GN=ydiU PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20 Identity = 64/200 (32.00%), Postives = 99/200 (49.50%), Query Frame = -3 Query: 253 PDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWAYR 843 P + LWN+ + + TL+ +D N ++ Y + Y M +KLG K+ ++++L + MA ++ DYT FR LS + + PL+ +D + A+ W Y L +SD ER+ LM SVNP VLRN+L Q AI+AAE GD E+ RL + + P+ ++ + Y PP W R Sbjct: 287 PAVALWNLQRLAQTLSPFVAVD--ALNEALDSYQQVLLTHYGERMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTE------QHSAASPLRDEFID-----RAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRD--DDYVSRPPDWGKR 471 The following BLAST results are available for this feature:
BLAST of CX671974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671974 ID=CX671974; Name=CX671974; organism=Citrus sinensis; type=EST; length=845bpback to top |