CX671971
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_BERST (Calreticulin OS=Berberis stolonifera PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.495e-23 Identity = 80/225 (35.56%), Postives = 111/225 (49.33%), Query Frame = 2 Query: 164 ESFDESFEGRWIVS--QKDE-YKGVWKRSKSEGH---EDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVS-KEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 E F++ +E +W+ S ++DE G W + + + D G+ E + YAI E S K T+V Q+ V+ + L+CGG Y+K L +G V K+F ++PY IMFGPD CG +T KVH IL GE H +K +D+LTHVYT IL+PD ILID EKQ + D PP + IPDP+ KP+ Sbjct: 28 ERFEDGWESKWVKSDWKRDENMAGEWNFTSGKWNGDANDKGIQTSEDYRFYAISAAFPE-FSNKGKTLVFQFSVKHEQKLDCGGGYMKLL----SGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILT-----KGE-TNHLIKKDVPCETDQLTHVYTFILRPDASYSILIDNVEKQSGSVYTDWDILPP----KQIKDPEAKKPEDWEDKEYIPDPEDKKPE 237
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_BOMMO (Calreticulin OS=Bombyx mori GN=crt PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.608e-22 Identity = 70/220 (31.82%), Postives = 105/220 (47.73%), Query Frame = 2 Query: 173 DESFEGRWIVSQKD-----EYKGVWKRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 D+S+E W+ S+ ++K + S+ +D GL E A+ YA+ ++ +P S + +V+Q+ V+ + ++CGG YLK + K+ E+PY IMFGPD CG T KVH I +K H +K D TH+YT I+KPDN +LID E+ + + A DF P KI DP+A KP+ Sbjct: 29 DDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKN------HLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLP---------------------NKKIKDPEAKKPE 217
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_CHLRE (Calreticulin OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.054e-21 Identity = 72/237 (30.38%), Postives = 107/237 (45.15%), Query Frame = 2 Query: 128 LISASDDATILYESFDESFEGRWIVSQ-------KDEYKGVWKRSKSEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 L+ A+ E+FD S+ RW S E+K + + D G+ G +K +AI L V+Q+ V+ + L+CGG Y+K + P + EF ++PY IMFGPD CG +T KVH IL +K + +K +D+LTHVYT ++KPDN ++LID +E + D PP R +I DP+ KP+ Sbjct: 12 LVVAASAKDYFKETFDGSWADRWTKSSWKVSDGSAGEFKLTAGKWYGDAEADKGIQTGPDSKFFAISAPLATVFDNTGKDTVVQFSVKHEQDLDCGGGYIKVV-PATSEKQMGEFGGDTPYSIMFGPDICGYSTRKVHVILTYKGKN------YLIKKDIKAETDQLTHVYTLVIKPDNTYQVLIDLKEVASGSLYEDWDMLPP----KTIKDPKASKPEDWDEREEIADPEDKKPE 237
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_MOUSE (Calreticulin OS=Mus musculus GN=Calr PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20 Identity = 74/235 (31.49%), Postives = 110/235 (46.81%), Query Frame = 2 Query: 131 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKRSKSEG--HEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++A+D A E F +++ RW+ S+ D K V K G +D GL + A+ YA+ + EP S K T+V+Q+ V+ + ++CGG Y+K +G K+ +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KP+ Sbjct: 14 LAAADPAIYFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDLEKDKGLQTSQDARFYALSAKF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLF---PSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDAAKPE 217
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_MAIZE (Calreticulin OS=Zea mays GN=CRT PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20 Identity = 80/236 (33.90%), Postives = 111/236 (47.03%), Query Frame = 2 Query: 131 ISASDDATILYESFDESFEGRWIVSQ--KDE-YKGVWKRSKSEGH---EDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVS-KEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++A E F++ +E RW+ S+ KDE G W + + + ED G+ E + YAI E E S KD T+VLQ+ V+ + L+CGG Y+K L G V K ++ Y I+ PD +T KVH IL K G+ H +K +D+LTHVYT I++PD ILID EEK + D PP KI DP+A KP+ Sbjct: 20 VAAVAGEVFFQEKFEDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDAEDKGIQTSEDYRFYAISAEYPE-FSNKDKTLVLQFSVKHEQKLDCGGGYVKLL----GGDVDQKTLGGDTSYSIISRPDISRYSTKKVHTILT----KDGK--NHLIKKDVPCQTDQLTHVYTFIIRPDATYSILIDNEEKHTGSIYEHWDILPP---------------------KKIKDPEAKKPE 223
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_RAT (Calreticulin OS=Rattus norvegicus GN=Calr PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 74/235 (31.49%), Postives = 108/235 (45.96%), Query Frame = 2 Query: 131 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKRSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++A+D A E F +++ RW+ S+ D K V K G + D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K G K+ +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KP+ Sbjct: 14 LAAADPAIYFKEQFLDGDAWTNRWVESKHKSDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLF---PGGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDAAKPE 217
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_DROME (Calreticulin OS=Drosophila melanogaster GN=Crc PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20 Identity = 73/226 (32.30%), Postives = 104/226 (46.02%), Query Frame = 2 Query: 158 LYESFD-ESFEGRWIVSQ---KDEYKGVWKRSK--SEGHEDYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 L E+FD E++E WI S+ K+ K V ++ D G+ + A+ YA ++ D S +D +V+Q+ V+ + ++CGG Y+K + + ESPY IMFGPD CG T KVH I +K H + D TH YT I++PDN +LID E+ + N DF P RA IPDPD KP+ Sbjct: 23 LKENFDNENWEDTWIYSKHPGKEFGKFVLTPGTFYNDAEADKGIQTSQDARFYAASRKFDG-FSNEDKPLVVQFSVKHEQNIDCGGGYVKLF---DCSLDQTDMHGESPYEIMFGPDICGPGTKKVHVIFSYKGKN------HLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNEKVESGNLEDDWDFLAP----KKIKDPTATKPEDWDDRATIPDPDDKKPE 234
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_CRIGR (Calreticulin OS=Cricetulus griseus GN=CALR PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.876e-19 Identity = 72/235 (30.64%), Postives = 106/235 (45.11%), Query Frame = 2 Query: 131 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKRSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++A++ A E F + + RW+ S+ D K V K G + D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K K+ +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KP+ Sbjct: 14 LAAAEPAVYFKEQFLDGDDWTNRWVESKHKSDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLF---PGSLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDAAKPE 217
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_MACFU (Calreticulin OS=Macaca fuscata fuscata GN=CALR PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19 Identity = 76/235 (32.34%), Postives = 107/235 (45.53%), Query Frame = 2 Query: 131 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKRSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++A++ A E F + + RWI S+ D K V K G E D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K L P D+E Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KP+ Sbjct: 14 LAAAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVK-LFPNSLDQTDMHGDSE--YNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPE 217
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_MACFA (Calreticulin OS=Macaca fascicularis GN=CALR PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19 Identity = 76/235 (32.34%), Postives = 107/235 (45.53%), Query Frame = 2 Query: 131 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKRSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++A++ A E F + + RWI S+ D K V K G E D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K L P D+E Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KP+ Sbjct: 14 LAAAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVK-LFPNSLDQTDMHGDSE--YNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPE 217 The following BLAST results are available for this feature:
BLAST of CX671971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671971 ID=CX671971; Name=CX671971; organism=Citrus sinensis; type=EST; length=814bpback to top |