CX671971
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_CERAE (Calreticulin OS=Cercopithecus aethiops GN=CALR PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.369e-19 Identity = 76/235 (32.34%), Postives = 107/235 (45.53%), Query Frame = 2 Query: 131 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKRSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++A++ A E F + + RWI S+ D K V K G E D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K L P D+E Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KP+ Sbjct: 14 LAAAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVK-LFPNSLDQTDMHGDSE--YNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPE 217
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_RABIT (Calreticulin OS=Oryctolagus cuniculus GN=CALR PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18 Identity = 73/235 (31.06%), Postives = 106/235 (45.11%), Query Frame = 2 Query: 131 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKRSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++A++ E F + + RWI S+ D K V K G + D GL + A+ YA+ EP S K +V+Q+ V+ + ++CGG Y+K AG K+ +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KP+ Sbjct: 14 LAAAEPVVYFKEQFLDGDGWTERWIESKHKSDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARF-EPFSNKGQPLVVQFTVKHEQNIDCGGGYVKLF---PAGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPE 217
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_BOVIN (Calreticulin OS=Bos taurus GN=CALR PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.086e-18 Identity = 73/235 (31.06%), Postives = 106/235 (45.11%), Query Frame = 2 Query: 131 ISASDDATILYESF--DESFEGRWIVSQK--DEYKGVWKRSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++A+D E F + + RWI S+ D K V K G + D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K AG + +S Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++P+N + ID + + + DF PP KI DPDA KP+ Sbjct: 14 LAAADPTVYFKEQFLDGDGWTERWIESKHKPDFGKFVLSSGKFYGDQEKDKGLQTSQDARFYALSARF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLF---PAGLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPNNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDAAKPE 217
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR_HUMAN (Calreticulin OS=Homo sapiens GN=CALR PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.853e-18 Identity = 75/235 (31.91%), Postives = 106/235 (45.11%), Query Frame = 2 Query: 131 ISASDDATILYESF--DESFEGRWIVSQ--KDEYKGVWKRSKSEGHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGEEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVKPD 814 ++ ++ A E F + + RWI S+ D K V K G E D GL + A+ YA+ EP S K T+V+Q+ V+ + ++CGG Y+K L P D+E Y IMFGPD CG T KVH I +K I ++ D+ TH+YT I++PDN + ID + + + DF PP KI DPDA KP+ Sbjct: 14 LAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASF-EPFSNKGQTLVVQFTVKHEQNIDCGGGYVK-LFPNSLDQTDMHGDSE--YNIMFGPDICGPGTKKVHVIFNYKG--KNVLINKDIR----CKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPP---------------------KKIKDPDASKPE 217
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR3_MOUSE (Calreticulin-3 OS=Mus musculus GN=Calr3 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18 Identity = 62/169 (36.69%), Postives = 89/169 (52.66%), Query Frame = 2 Query: 176 ESFEGRWIVSQKDEYKGVWKRSKSE--GHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGE 667 E + RW+ S D G ++ S + GH+ D GL + ++ YAI +P S K T+V+QY V+ + ++CGG Y+K P + K+ + +S Y IMFGPD CG KVH IL KN +Y H K P D TH+YT IL+PD + +DG+ Sbjct: 31 ERWRNRWVQSTNDSQFGHFRVSSGKFYGHKEKDKGLQTTQNSRFYAISASF-KPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVF-PSDLD--QKKMNGKSQYYIMFGPDICGFDIKKVHVILYFKN----QY--HENKKPIRCKVDGFTHLYTLILRPDLSYEVKVDGQ 189
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR3_BOVIN (Calreticulin-3 OS=Bos taurus GN=CALR3 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16 Identity = 61/169 (36.09%), Postives = 87/169 (51.48%), Query Frame = 2 Query: 176 ESFEGRWIVSQKDEYKGVWKRSKSE--GHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCGATNK-VHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGE 667 E + RW+ S D G ++ S GH+ D GL + ++ YAI +P S K T+++QY V+ + ++CGG Y+K L P + K + +S Y IMFGPD CG K VH IL KN +Y H K D TH+YT +L+PD + IDG+ Sbjct: 31 ERWRNRWVHSTNDSQFGHFRLSSGNFYGHKEKDKGLQTTQNSRFYAISARF-KPFSNKGKTLIIQYTVKHEQKMDCGGGYIK-LFPADVD--QKNLNGKSQYYIMFGPDICGFDIKTVHVILHFKN----QY--HANKKSIRCKVDSFTHLYTLVLRPDLTYEVKIDGQ 189
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALR3_HUMAN (Calreticulin-3 OS=Homo sapiens GN=CALR3 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.734e-16 Identity = 61/169 (36.09%), Postives = 83/169 (49.11%), Query Frame = 2 Query: 176 ESFEGRWIVSQKDEYKGVWKRSKSE--GHE--DYGLLVGEPAKKYAIVKELDEPLSLKDGTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEFDNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPPSVPSDKLTHVYTAILKPDNELRILIDGE 667 E + RW+ S D G ++ S + GH+ D GL + + YAI +P S K T+V+QY V+ + ++CGG Y+K A K + +S Y IMFGPD CG KVH IL KN H K D TH+YT IL+PD + IDG+ Sbjct: 31 EHWRNRWLQSTNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISARF-KPFSNKGKTLVIQYTVKHEQKMDCGGGYIKVF---PADIDQKNLNGKSQYYIMFGPDICGFDIKKVHVILHFKNK------YHENKKLIRCKVDGFTHLYTLILRPDLSYDVKIDGQ 189
BLAST of CX671971 vs. ExPASy Swiss-Prot
Match: CALX_YEAST (Calnexin homolog OS=Saccharomyces cerevisiae GN=CNE1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11 Identity = 70/263 (26.62%), Postives = 114/263 (43.35%), Query Frame = 2 Query: 134 SASDDATILYESFDESFEG---------RWIVSQKDEYKGV------WKRSKSE---GHEDYGLLVGEPAKKYAIVKELDEPLSLKD-GTVVLQYEVRLQNGLECGGAYLKYLRPQEAGWVSKEF------DNESPYMIMFGPDKCG-ATNKVHFILKHKNPKSGEYIEHHLKNPP--SVPSDKLTHVYTAIL-KPDNELRILIDG---------EEKQKANFLAADDFQPPLIXXXXXXXXXXXXXXXXXXRAKIPDPDAVK 808 S + T+ +SF E F+ WI S+ +G W+ S+ D G+ V I L+ P+++ + T+V+QYE++L N L CGGA++K + +G+++ E D E ++ FGPD C N V F + + + E +L+ P + +H+YT I+ + +ILIDG E+K+K N F+PP+ R +IPDP+AVK Sbjct: 21 SLLSNVTLAEDSFWEHFQAYTNTKHLNQEWITSEAVNNEGSKIYGAQWRLSQGRLQGSAWDKGIAVRTGNAAAMIGHLLETPINVSETDTLVVQYEIKLDNSLTCGGAFIKLM----SGFMNVEALKHYAPDTEGVELV-FGPDYCAPEINGVQFAINKVDKITHESKLRYLQEMPLSKLTDTSQSHLYTLIIDESAQSFQILIDGKTVMVREHIEDKKKVN------FEPPITPPLMIPDVSVAKPHDWDDRIRIPDPEAVK 272 The following BLAST results are available for this feature:
BLAST of CX671971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671971 ID=CX671971; Name=CX671971; organism=Citrus sinensis; type=EST; length=814bpback to top |