CX671970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_AERPE (Translation initiation factor 6 OS=Aeropyrum pernix GN=eif6 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.751e-29 Identity = 77/208 (37.02%), Postives = 116/208 (55.77%), Query Frame = -3 Query: 273 VGVFSKLTNAYCLVQIG-GSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 893 +GV+ +++Y L G++ + E + VV+ + G R++G L GN G+LLP D+E++ +R +L + V V + R +ALGN I CND L L++E + ++D LGVEV ++AG VGS +NRGGL HP S E+L LS + +VP AGT+N G E + GL N + A G DTT E++ I+ Sbjct: 20 IGVYLTASDSYVLAPDDIGADDVRTISEVLGVAMERVVRLRVLGMRLVGVLTTGNSRGILLPEGV-DREVELVRKAL-EGVEVGIVPTRSNALGNVIVCNDRACLASPGLEKEALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRTGLVANSYGALVGEDTTGPEIARIQ 225
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_PYRFU (Translation initiation factor 6 OS=Pyrococcus furiosus GN=eif6 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.103e-29 Identity = 80/216 (37.04%), Postives = 116/216 (53.70%), Query Frame = -3 Query: 273 FENSCEVGVFSKLTNAYCLVQIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVV---VQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 911 FENS +GVF T+ L++ G E L +PVV+ S+ +RIIG L AGN N +++P D EL+ ++N+ + + V + + +ALGN I ND AL + RE + I D+LGVEV R IAG + VGS +N+GGLVHP + E+L+ LS L +V + GT N G + + + N + G TT E+ IE Sbjct: 8 FENSPYLGVFGIATDKVVLIREGLQEKKLEVIREVLK--VPVVEASLMKSRIIGVLGAGNSNAIIVPWYVWDSELEKIKNAFREYGIDTEVVPFQTKYTALGNLILTNDKGALVSSKFSREEAKKIGDILGVEVERGVIAGIVAVGSAGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPYVGSCMLANSYGVVVGHLTTGPEIVKIE 221
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_METST (Translation initiation factor 6 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif6 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 8.103e-29 Identity = 79/214 (36.92%), Postives = 118/214 (55.14%), Query Frame = -3 Query: 252 VGVFSKLTNAYCLVQIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 893 +GV + +V G +S+ + + L +P++KT I G+ + G L AGN NGLL+ EL LR + V+ + ++L+A+GN I ND+ AL + L E + +I + L VEV +IAG +VGS + +NRG LVHP S E+LD + +L VP GTVNRG +++ A + N G+ TT EL+ I+ VF L E Sbjct: 13 LGVSILAKDNVAIVSPGLQDSYLKSIKETLN--VPIIKTPICGSNLAGALMAGNSNGLLISPYVFSHELDVLREH---DINVEIMPDKLTAIGNIIVANDNGALVNPSLSDEAKRIIKNTLEVEVVETSIAGLDIVGSLVAATNRGALVHPDASEEELDLVEDVLGVPAEIGTVNRGVKLVGACIIANSNGVIVGNKTTGPELARIDQVFNLFE 221
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_THEON (Translation initiation factor 6 OS=Thermococcus onnurineus (strain NA1) GN=eif6 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.252e-28 Identity = 78/216 (36.11%), Postives = 111/216 (51.39%), Query Frame = -3 Query: 273 FENSCEVGVFSKLTNAYCLVQIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIE---ERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 911 FENS +GV+ T+ L++ G E L +P+++TSI +RI+G AGN N +++P D EL+H++N L + + RIE L+A GN I ND AL RE + + D+LGVEV R I VGS +NRGGLVHP + E+L+ L L +V + GT N G + + + N G TT E+ IE Sbjct: 8 FENSPYLGVYGTATDRVALIREGLGEKKLEVLREVLK--VPLIETSIMKSRIVGVFAAGNSNAIVVPWYIWDAELEHIQNELNELDIDMRIEPFQSTLTAFGNLILANDKAALISVKFTREEAKKLEDILGVEVERGMIGDYHAVGSVGVVTNRGGLVHPEATDEELEWLRDLFKVDIYVGTANMGVPFVGSCMLANSHGVVVGHLTTGPEIVKIE 221
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_PYRHO (Translation initiation factor 6 OS=Pyrococcus horikoshii GN=eif6 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.959e-28 Identity = 77/216 (35.65%), Postives = 111/216 (51.39%), Query Frame = -3 Query: 273 FENSCEVGVFSKLTNAYCLVQIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 911 FENS +GVF T+ L++ G E L +PV++ S+ +RIIG L GN N ++LP D E++ ++ +L + + + + +ALGN I ND AL R+ + I ++LGVEV R IAG VGS +N+GGLVHP TS E+L+ LS L +V + GT N G + + N G TT E+ IE Sbjct: 8 FENSPYLGVFGVATDRVVLIREGLQEKKLEVIRETLK--VPVIEVSVMKSRIIGTLATGNSNAIILPWYVWDAEIERIKKALSEYGIDMEVVPFRSKYTALGNLILTNDKAALVSAKFSRKEAQEIGEILGVEVERGVIAGLHAVGSAGVVTNKGGLVHPETSDEELEWLSDLFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIE 221
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_PYRAB (Translation initiation factor 6 OS=Pyrococcus abyssi GN=eif6 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.996e-27 Identity = 80/221 (36.20%), Postives = 111/221 (50.23%), Query Frame = -3 Query: 258 FENSCEVGVFSKLTNAYCLVQIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKL 911 FENS +GVF T+ LV+ G E L +PV++ SI +RIIG L GN N +L+P D E++ ++++ + + I + +ALGN I ND AL R+ + I D+LGVEV R IAG VGS +N+GGLVHP S E+L+ LS L +V + GT N G + + N G TT E+ IE L Sbjct: 8 FENSPYLGVFGVATDRVVLVREGLQEKKLEVIREVLK--VPVIEASIMKSRIIGTLATGNSNAILVPWYVWDTEIERIKSAFKEYGIETEIVPFRTKYTALGNLILTNDKAALVSAKFSRDEAKEIGDILGVEVERGLIAGLHAVGSAGVVTNKGGLVHPEASDEELEWLSELFKVDVYVGTANMGVPYVGTCMLANSNGVVVGHLTTGPEIVKIEEALGL 226
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_HYPBU (Translation initiation factor 6 OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=eif6 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.607e-27 Identity = 80/214 (37.38%), Postives = 111/214 (51.87%), Query Frame = -3 Query: 255 VGVFSKLTNAYCLVQIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNI-LVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLR 893 +GV+ N LV +E E L + V++T I I G + AGN NGLLLP +EL +LR + D+V ++ +E R +ALGN IA N+ AL +D+ + I VLGVE Q NI VGS +NRGG+VHP S +++ L+++ V TVN G + AGL ND A G +TT EL I+ +LR Sbjct: 13 IGVYIYANNKIALVPPTLTEKDKKKIEETLG--VEVIETKIADMIINGVMIAGNDNGLLLPRIVKPEELDYLREHIGDKVRLEILEVRQTALGNLIAANNRGALVSPLIDKAILDKIKSVLGVETIYQRHLANIPTVGSMIVVTNRGGVVHPGVSDDEIRILNSVFGVEFTTATVNFGLYFVKAGLVANDHGALVGDETTGPELMRIQQALRLR 224
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_THEGJ (Translation initiation factor 6 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eif6 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.807e-27 Identity = 76/216 (35.19%), Postives = 111/216 (51.39%), Query Frame = -3 Query: 273 FENSCEVGVFSKLTNAYCLVQIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRI---EERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 911 FENS +GV+ T+ +++ G E +T L +P+++TS+ +RI+G AGN N L++P D EL + L + + + + RL+A GN I ND AL D RE I D+LGV V R IA VGS +N+GGLVHP + E+L+ LS L +V + GT N G + + + N + G TT E+ IE Sbjct: 8 FENSPYLGVYGFATDRVAVIREGLGEKKLATLREVLK--VPLIETSVMKSRIVGIFVAGNSNALIVPWYIWDAELDFINAQLREYGIDMEVVPFQSRLTAFGNLILANDKGALVSKDFTREEARKIEDILGVPVERGVIADYTAVGSVGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPFVGSCMIANSYGVVVGHLTTGPEIVKIE 221
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_TRYCR (Eukaryotic translation initiation factor 6 (Fragment) OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.207e-26 Identity = 56/108 (51.85%), Postives = 81/108 (75.00%), Query Frame = -3 Query: 204 FRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIESVFKLRE---AQPSALVDEMRKSLID 518 FR +IA N LVGSY +N+G +VHP T +D+DE+++LLQVP+VAGT+NRG+ I +GL VNDW AFCG +TTATE++V+E +F+LR + L+ ++R +L+D Sbjct: 4 FRTSIAENALVGSYAVVNNKGCMVHPKTPAQDMDEIASLLQVPVVAGTINRGNAAIGSGLVVNDWAAFCGLNTTATEITVVERIFQLRRDLGGGRANLLQQLRDTLVD 111
BLAST of CX671970 vs. ExPASy Swiss-Prot
Match: IF6_PYRKO (Translation initiation factor 6 OS=Pyrococcus kodakaraensis GN=eif6 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.207e-26 Identity = 77/217 (35.48%), Postives = 114/217 (52.53%), Query Frame = -3 Query: 273 FENSCEVGVFSKLTNAYCLVQIGGSESFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLLPHTTTDQELQHLRNSLPD---QVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGV-EVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTVNDWTAFCGSDTTATELSVIE 911 FENS +GV+ + T+ L++ G E L +P+++TSI +RI+G AGN N +++P D EL+ ++ +L + + V + RL+ALGN I ND AL + RE I ++LGV EV R IA VGS +N+GGLVHP + E+L+ LS L V + GT N G + + + N + G TT E+ IE Sbjct: 8 FENSPYLGVYGRATDRVLLLREGLGEKKLEVLREVLK--VPIIETSIMKSRIVGIFAAGNSNAIIVPWYIWDAELERIKTALNEFGIDMDVVPFKSRLTALGNLILTNDKAALVSKEFTREEANAIGEILGVDEVERGMIASYRSVGSVGVVTNKGGLVHPEATDEELEWLSDLFGVDIYVGTANMGVPFVGSCMLANSYGVVVGHLTTGPEIVKIE 222 The following BLAST results are available for this feature:
BLAST of CX671970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671970 ID=CX671970; Name=CX671970; organism=Citrus sinensis; type=EST; length=913bpback to top |