CX671968

Overview
NameCX671968
Unique NameCX671968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_MOUSE (Nascent polypeptide-associated complex subunit alpha OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.793e-34
Identity = 77/123 (62.60%), Postives = 98/123 (79.67%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK    DIV+AIMELT
Sbjct:   92 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_HUMAN (Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.793e-34
Identity = 77/123 (62.60%), Postives = 98/123 (79.67%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK    DIV+AIMELT
Sbjct:   92 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_BOVIN (Nascent polypeptide-associated complex subunit alpha OS=Bos taurus GN=NACA PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.793e-34
Identity = 77/123 (62.60%), Postives = 98/123 (79.67%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK    DIV+AIMELT
Sbjct:   92 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACAM_MOUSE (Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus GN=Naca PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.793e-34
Identity = 77/123 (62.60%), Postives = 98/123 (79.67%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDETGVE KDIELVM+QA VSRAKAV+ALK    DIV+AIMELT
Sbjct: 2064 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 2186          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_XENLA (Nascent polypeptide-associated complex subunit alpha OS=Xenopus laevis GN=naca PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.441e-33
Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFK--APDLSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDE GVE KDIELVM+QA VSRAKAV+ALK    DIV+AIMELT
Sbjct:   90 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGETVSNIQENTQTPTVQEESEEEEVDEAGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 212          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_DROME (Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.441e-33
Identity = 72/124 (58.06%), Postives = 96/124 (77.42%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMA-----QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+ PDV+K+P +DTY++FGEAKIEDLS Q Q  AAE+FKAP+ +       ++        +D+E+VD+TGV+ KDIELV+TQA  +RAKA+KALK  + DIV+AIMELT
Sbjct:   92 NRVTIRKSKNILFVINNPDVYKNPHSDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEAAGAADSVGATTSVAPIAEEDEEDVDDTGVDEKDIELVITQANTTRAKAIKALKNNNNDIVNAIMELT 215          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_PONAB (Nascent polypeptide-associated complex subunit alpha OS=Pongo abelii GN=NACA PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.458e-33
Identity = 76/123 (61.79%), Postives = 97/123 (78.86%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDET VE KDIELVM+QA VSRAKAV+ALK    DIV+AIMELT
Sbjct:   92 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETDVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELT 214          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACA_CHILA (Nascent polypeptide-associated complex subunit alpha OS=Chinchilla lanigera PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.153e-33
Identity = 75/123 (60.98%), Postives = 97/123 (78.86%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS Q Q  AAE+FK     +S++    ++  + +  ++EEVDETGVE KDIE VM+QA VSRAKAV+ALK    +IV+AIMELT
Sbjct:   92 TRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVKDIEWVMSQANVSRAKAVRALKNNSNNIVNAIMELT 214          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACAD_HUMAN (NAC-alpha domain-containing protein 1 OS=Homo sapiens GN=NACAD PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 3.550e-32
Identity = 76/130 (58.46%), Postives = 95/130 (73.08%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAM-----------AQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +R+T++KSKNILFVI+KPDVFKSP +DTYV+FGEAKIEDLS Q+   AAE+FK P     +  PES+              +++EEVDE G+E +DIELVM QA VSRAKAV+AL+    DIV+AIMELT
Sbjct: 1433 TRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVHKAAAEKFKVPSEPSAL-VPESAPRPRVRLECKEEEEEEEEEVDEAGLELRDIELVMAQANVSRAKAVRALRDNHSDIVNAIMELT 1561          
BLAST of CX671968 vs. ExPASy Swiss-Prot
Match: NACP1_HUMAN (Putative nascent polypeptide-associated complex subunit alpha-like protein OS=Homo sapiens GN=NACAP1 PE=5 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.126e-31
Identity = 74/123 (60.16%), Postives = 98/123 (79.67%), Query Frame = -1
Query:  422 SRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPD--LSHVVSKPESSAMAQ--DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 778
            +RVT++KSKNILFVI+KPDV+KSP +DTY++FGEAKIEDLS + Q  AAE+FK     +S++    ++  + +  +DEEVDETGVE KDIELV++QA V  AKAV+ALK ++ DIV+AIMELT
Sbjct:   91 TRVTIRKSKNILFVITKPDVYKSPASDTYMVFGEAKIEDLSQEAQLAAAEKFKVQGEAVSNIQENTQTPTVQEGSEDEEVDETGVEIKDIELVLSQANVWGAKAVRALKNSN-DIVNAIMELT 212          
The following BLAST results are available for this feature:
BLAST of CX671968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_MOUSE3.793e-3462.60Nascent polypeptide-associated complex subunit alp... [more]
NACA_HUMAN3.793e-3462.60Nascent polypeptide-associated complex subunit alp... [more]
NACA_BOVIN3.793e-3462.60Nascent polypeptide-associated complex subunit alp... [more]
NACAM_MOUSE3.793e-3462.60Nascent polypeptide-associated complex subunit alp... [more]
NACA_XENLA1.441e-3361.79Nascent polypeptide-associated complex subunit alp... [more]
NACA_DROME1.441e-3358.06Nascent polypeptide-associated complex subunit alp... [more]
NACA_PONAB2.458e-3361.79Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHILA7.153e-3360.98Nascent polypeptide-associated complex subunit alp... [more]
NACAD_HUMAN3.550e-3258.46NAC-alpha domain-containing protein 1 OS=Homo sapi... [more]
NACP1_HUMAN5.126e-3160.16Putative nascent polypeptide-associated complex su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_14B11_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-14B11-C22-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671968 ID=CX671968; Name=CX671968; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTTTTTTTACGAGAGTGCAAATATTATTTTCCCTTTATATT
ATTTTCCCTTTTCTTTTCCTTGTTTAATGTCGAATCGTTTACAAGGAGAG
AAATGGGATCAACCACTGAAATTTTTGTAACCATAATTGTAAATCATTTT
AGCAAGAATCCTTCAGTCGACCATTCAGAAAAGCCTGGTCTTGATACAAA
GGAACTTAGTCAGGAACCAGTCACATATGAAAGAAAAACAAGTAAATTGC
CCAGCCAAAGCAAAAGGAATCACAAACAGTTCCATTTCACAATCAACAGC
TTTGCAGATTCTCTCCTCTTCAATTCCCACAGACAATATTGGGTATTTGG
TAATAAAGAATACTGTGGCGTGAAATGTTTTCTTGTGAGCAGCACACAAA
CATCTAAGAAAACTCTCAGTTGGTAAGCTCCATGATAGCTGAAACTATGT
CCCCATCTGCAGCCTTCAGCGCTTTCACAGCCTTTGCCCTGGAGACTCCT
GCCTGTGTCATTACTAACTCTATGTCCTTAGGCTCAACCCCGGTCTCATC
TACTTCTTCATCGTCCTGAGCCATGGCTGATGACTCAGGTTTGGAGACCA
CGTGGCTGAGATCAGGAGCCTTAAATTGCTCTGCTGCCTGAGTCTGCAAT
TGTGAGCTCAAGTCCTCGATCTTTGCCTCACCAAAGATTACATATGTATC
TGTTGTCGGGCTCTTGAAAACATCCGGTTTTGAGATAACAAACAAGATAT
TCTTGCTCTTTTTGACGGTAACCCGGCT
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